CX294559

Overview
NameCX294559
Unique NameCX294559
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length608
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5597 contig Ccv1_Contig5597:178..785. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: DTDH_MUCMU (4-dihydromethyl-trisporate dehydrogenase OS=Mucor mucedo GN=tdh PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.024e-32
Identity = 78/192 (40.62%), Postives = 108/192 (56.25%), Query Frame = 2
Query:   59 TGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGS----------VG-FKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKL 601
            TG K+P  G G W+ D       V  AIK GYR  D A  YGNE E+G  + K   + +VKREDL+I +KLWN +H  + V    DR L+D  ++Y DLYL+H+PV ++             VG  K    ++  I   W  +E + D+G AR IGV+NF+ + + DLL  AR+ PAV Q+E HP   Q++L
Sbjct:   11 TGDKMPIRGFGCWKIDTKDCEETVYQAIKTGYRLFDGACDYGNEVEVGRGINKAINEGLVKREDLFIVTKLWNTFHSKKHVRALFDRQLKDTGLEYFDLYLIHFPVPLQYVDPATVYPPGWYVGDAKSLQFEQSPIHECWAELEKIVDAGLARNIGVANFNCQAILDLLTYARIKPAVLQIELHPYLPQERL 202          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: S6PD_MALDO (NADP-dependent D-sorbitol-6-phosphate dehydrogenase OS=Malus domestica GN=S6PDH PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.337e-32
Identity = 73/192 (38.02%), Postives = 111/192 (57.81%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKP---------DIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKL 601
            L++G ++P +GLG W+ +   +   +  AIK GYRH DCA  Y +E ++G  L + F+  +VKRE+L+IT+K+WN+ H    V EA   +L  LQIDYLDLYL+H+P+  K  ++G     L +           +  TW+ ME     G  R+IG+SN+      D L  +++ PAV+Q E HP +Q+  L
Sbjct:    6 LSSGYEMPVIGLGLWRLEKDELKEVILNAIKIGYRHFDCAAHYKSEADVGEALAEAFKTGLVKREELFITTKIWNSDH--GHVVEACKNSLEKLQIDYLDLYLVHYPMPTKHNAIGKTASLLGEDKVLDIDVTISLQQTWEGMEKTVSLGLVRSIGLSNYELFLTRDCLAYSKIKPAVSQFETHPYFQRDSL 195          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1D1_RABIT (3-oxo-5-beta-steroid 4-dehydrogenase OS=Oryctolagus cuniculus GN=AKR1D1 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.891e-32
Identity = 80/195 (41.03%), Postives = 116/195 (59.49%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDP-----GVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGF-KPEN----LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            L  G  IP +GLGT+ S+P     G    +V  AI  GYRHID A IY NE E+G   ++   +  V+RED++   KLW   H+P  V   L+RTL+ L++DY+DLY++  P+  K G V + + EN      K ++ +TW+A+EA  D+G  +++GVSNF+ ++L  LL     +  P  NQVECHP + Q KL
Sbjct:   12 LGDGNSIPIIGLGTY-SEPKTTPKGSCATSVKIAIDTGYRHIDGAYIYQNEHEVGETFREKIAEGKVRREDIFYCGKLWATNHDPVMVRPTLERTLKVLKLDYIDLYIIEIPMAFKPGDVVYPRDENGKWLYHKTNLCATWEALEACKDAGLVKSLGVSNFNRQQLELLLNKPGLKHKPVCNQVECHPYFTQPKL 205          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: ARA1_YEAST (D-arabinose dehydrogenase [NAD(P)+] heavy chain OS=Saccharomyces cerevisiae GN=ARA1 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 6.637e-32
Identity = 84/207 (40.58%), Postives = 117/207 (56.52%), Query Frame = 2
Query:   44 HFVLNTGAKIPSVGLGTWQSDPGVVGN--AVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWP-----VKMKKGSVGFKPENLDKP---------DIPSTWKAMEALY---DSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKLRE 607
            +F LN G +IP++GLGT      +     AV AAIKAGYRHID A  Y  E  +G  +K+  ED  +KREDL+IT+K+W      ++V  +L+ +L+ L ++Y+DL L HWP     +K  KG  G     +D           D   T+K +E +Y   +  + RAIGVSNFS + L  L++  RV P VNQVE HP   Q +LR+
Sbjct:   24 YFSLNNGVRIPALGLGTANPHEKLAETKQAVKAAIKAGYRHIDTAWAYETEPFVGEAIKELLEDGSIKREDLFITTKVWPVLW--DEVDRSLNESLKALGLEYVDLLLQHWPLCFEKIKDPKGISGLVKTPVDDSGKTMYAADGDYLETYKQLEKIYLDPNDHRVRAIGVSNFSIEYLERLIKECRVKPTVNQVETHPHLPQMELRK 228          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: Y1985_MYCSK (Uncharacterized oxidoreductase Mkms_1985 OS=Mycobacterium sp. (strain KMS) GN=Mkms_1985 PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 8.669e-32
Identity = 75/185 (40.54%), Postives = 106/185 (57.30%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKLRE 607
            LN G  IP VGLG WQ+ P     AVAAA+ AGYRH+D A  YGNE++ G  + +    + + R  +++ +KLWN+    +    A + ++  L +DYLDLYL+HWPV  K   V              T+KA   L + G+ R+IGVSNF  + L  L++   + PAVNQ+E HP   Q++LRE
Sbjct:    8 LNDGNSIPQVGLGVWQTPPEDTERAVAAALAAGYRHVDTAAAYGNEEQTGRAIAQ----SGLDRSQVYLVTKLWNSEQGYDATLAAFEASVDRLGVDYLDLYLIHWPVPEKNLFV-------------DTFKAFARLREDGRIRSIGVSNFEPEHLRVLIDSTGIVPAVNQIELHPLLPQRELRE 175          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1CL_MOUSE (Aldo-keto reductase family 1 member C21 OS=Mus musculus GN=Akr1c21 PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.132e-31
Identity = 74/194 (38.14%), Postives = 108/194 (55.67%), Query Frame = 2
Query:   50 VLNTGAKIPSVGLGT---WQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN-----LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            +LN G  IP +G GT    +            AI AG+ H D A +Y  E  +G  ++    D  V+RED++ TSK+W     PE V  +L+R+L+ LQ DY+DLYL+H+P+ +K G   F  +       D+ D+ +TW+AME   D+G  ++IGVSNF+ ++L  +L     +  P  NQVECHP   Q KL
Sbjct:    9 ILNDGNFIPVLGFGTALPLECPKSKAKELTKIAIDAGFHHFDSASVYNTEDHVGEAIRSKIADGTVRREDIFYTSKVWCTSLHPELVRASLERSLQKLQFDYVDLYLIHYPMALKPGEENFPVDEHGKLIFDRVDLCATWEAMEKCKDAGLTKSIGVSNFNYRQLEMILNKPGLKYKPVCNQVECHPYLNQMKL 202          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: Y1919_MYCSJ (Uncharacterized oxidoreductase Mjls_1919 OS=Mycobacterium sp. (strain JLS) GN=Mjls_1919 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.931e-31
Identity = 74/185 (40.00%), Postives = 106/185 (57.30%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKLRE 607
            LN G  IP VGLG WQ+ P     AVAAA+ AGYRH+D A  YGNE++ G  + +    + + R  +++ +KLWN+    +    A + ++  L +DYLDLYL+HWPV  K   V              T++A   L + G+ R+IGVSNF  + L  L++   + PAVNQ+E HP   Q++LRE
Sbjct:    8 LNDGNSIPQVGLGVWQTPPEDTERAVAAALAAGYRHVDTAAAYGNEEQTGRAIAQ----SGLDRSQVYLVTKLWNSEQGYDATLAAFEASVDRLGVDYLDLYLIHWPVPEKNLFV-------------DTFRAFARLREDGRIRSIGVSNFEPEHLRVLIDSTGIVPAVNQIELHPLLPQRELRE 175          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: NADO1_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 1 OS=Oryza sativa subsp. japonica GN=Os10g0113000 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.931e-31
Identity = 83/188 (44.15%), Postives = 112/188 (59.57%), Query Frame = 2
Query:   71 IPSVGLGT----WQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIG-LVLKKFFEDAVVKREDLWITSKLW-NAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFK-PENLDKP--DIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKLRE 607
            +P VG+GT    + S       A+  AI+ GYRH D A+IY  E  +G  V +      +  R D+++TSK+W +  H    VP A + TLR+L +DY+DL L+HWPV +  G+  F  P+ +  P  D+   W+ ME  +  G ARAIGVSNFS KKL  LL +A V PAVNQVE +P WQQ+ LRE
Sbjct:   16 MPRVGMGTAAFPFTSSEDTTA-AMLRAIELGYRHFDTARIYATEGCVGEAVAEAVRRGLIASRADVFVTSKIWCSDLHAGRVVPAARE-TLRNLGMDYVDLLLVHWPVSLTPGNYDFPFPKEVILPSFDMEGVWRGMEECHRLGLARAIGVSNFSAKKLEQLLSLAAVRPAVNQVEVNPMWQQRTLRE 201          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1CD_MESAU (Aldo-keto reductase family 1 member C13 OS=Mesocricetus auratus GN=AKR1C13 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.212e-30
Identity = 75/190 (39.47%), Postives = 111/190 (58.42%), Query Frame = 2
Query:   62 GAKIPSVGLGTWQSDPGVVGNAVAAA---IKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN-----LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            G  IP++G GT++        A+ AA   I  GYRHID A  Y  E+EIG  ++   +  +VKRED++IT+KLW    +PE V  +L++    LQ++++DL++MH+PV MK G   F  +      LD  D  +TW+A+E   D+G  ++IGVSNF+ ++L  +L     +  P  NQVECH    Q KL
Sbjct:   13 GHCIPALGFGTYKPIEVPKSKAMEAANLAIGVGYRHIDTAYAYQIEEEIGQAIQSNIKAGIVKREDMFITTKLWCTCFQPELVRPSLEKXXXKLQLEHVDLFIMHYPVPMKAGDNDFPLDEQGKLLLDTVDFCATWEALEKXXDAGLVKSIGVSNFNMRQLERILNKPGLKYKPVCNQVECHVYNNQSKL 202          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: DKGA_SALTI (Putative 2,5-diketo-D-gluconic acid reductase A OS=Salmonella typhi GN=dkgA PE=5 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 8.114e-30
Identity = 76/183 (41.53%), Postives = 101/183 (55.19%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKL 601
            L  G  +P +GLG W++    V  A+  A++ GYR ID A  Y NE+ +G  LK     A V RE+L+IT+KLWN   + +   EAL  +L+ LQ+DYLDLYLMHWPV      V               WK M AL   G  ++IGV NF    L  L++   VPP +NQ+E HP  QQ++L
Sbjct:    9 LQDGNVMPQLGLGVWKASNEEVIAAIHKALEVGYRSIDTATAYQNEEGVGKALKA----ASVAREELFITTKLWN--DDQKRPREALQESLKKLQLDYLDLYLMHWPVPAIDHYV-------------DAWKGMIALQKEGLVKSIGVCNFQIHHLQRLIDETGVPPVINQIELHPLMQQRQL 172          
The following BLAST results are available for this feature:
BLAST of CX294559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
DTDH_MUCMU1.024e-3240.634-dihydromethyl-trisporate dehydrogenase OS=Mucor ... [more]
S6PD_MALDO1.337e-3238.02NADP-dependent D-sorbitol-6-phosphate dehydrogenas... [more]
AK1D1_RABIT3.891e-3241.033-oxo-5-beta-steroid 4-dehydrogenase OS=Oryctolagu... [more]
ARA1_YEAST6.637e-3240.58D-arabinose dehydrogenase [NAD(P)+] heavy chain OS... [more]
Y1985_MYCSK8.669e-3240.54Uncharacterized oxidoreductase Mkms_1985 OS=Mycoba... [more]
AK1CL_MOUSE1.132e-3138.14Aldo-keto reductase family 1 member C21 OS=Mus mus... [more]
Y1919_MYCSJ1.931e-3140.00Uncharacterized oxidoreductase Mjls_1919 OS=Mycoba... [more]
NADO1_ORYSJ1.931e-3144.15Probable NAD(P)H-dependent oxidoreductase 1 OS=Ory... [more]
AK1CD_MESAU6.212e-3039.47Aldo-keto reductase family 1 member C13 OS=Mesocri... [more]
DKGA_SALTI8.114e-3041.53Putative 2,5-diketo-D-gluconic acid reductase A OS... [more]

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Properties
Property NameValue
Genbank descriptionC05054C01SK FlavRip1 Citrus clementina cDNA clone C05054C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294559 ID=CX294559; Name=CX294559; organism=Citrus clementina; type=EST; length=608bp
TCTCTCTAACGCTTAGCTTTCGAAAATGGCAAATGAGATTCGACACTTCG
TGCTGAACACCGGAGCCAAAATCCCGTCCGTTGGATTAGGCACGTGGCAG
TCTGATCCTGGTGTCGTCGGCAACGCCGTTGCTGCCGCCATCAAGGCTGG
ATACCGACATATTGATTGTGCTCAAATTTACGGCAATGAAAAGGAGATTG
GTTTGGTGCTGAAGAAGTTTTTTGAAGATGCTGTTGTCAAGCGTGAGGAT
TTGTGGATTACCTCTAAACTCTGGAATGCTTATCATGAACCAGAAGATGT
ACCAGAGGCATTGGACAGAACTTTGCGGGACTTACAGATTGACTACCTTG
ATCTATACCTTATGCACTGGCCAGTTAAGATGAAGAAGGGGTCTGTTGGC
TTCAAGCCAGAAAACCTTGATAAACCAGATATACCTAGCACGTGGAAAGC
AATGGAGGCACTTTATGACTCTGGCAAGGCTCGAGCGATCGGAGTAAGCA
ATTTTTCTACAAAGAAGCTTGGAGATTTGTTGGAAGTGGCACGTGTGCCT
CCTGCTGTTAACCAAGTGGAATGCCATCCTTCATGGCAGCAGCAAAAGCT
TCGTGAAT
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