CX294559

Overview
NameCX294559
Unique NameCX294559
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length608
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5597 contig Ccv1_Contig5597:178..785. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: NADO2_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 2 OS=Oryza sativa subsp. japonica GN=Os10g0113100 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.808e-29
Identity = 80/187 (42.78%), Postives = 105/187 (56.15%), Query Frame = 2
Query:   71 IPSVGLGTWQ---SDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIG-LVLKKFFEDAVVKREDLWITSKLW-NAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGF---KPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKLRE 607
            +P +G+GT     +       A+  AI+ GYRH D A++Y  E  +   V +      V  R D+++TSKLW +  H    VP A + TLR+L +DY+DL L+HWP  +  GS  F   K E     D+   W+ ME  +  G ARAIGVSNFS KKL  LL  A V PA NQVE +P WQQ+ LRE
Sbjct:   18 MPRIGMGTAAFPFTSSEETTAALLRAIELGYRHFDTARLYATEGCVSEAVAEAVRRGLVASRADVFVTSKLWCSDLHAGRVVPAARE-TLRNLGMDYVDLLLVHWPATVAPGSYDFPFPKEEMAPAFDMEGVWRGMEECHRLGLARAIGVSNFSAKKLEQLLSFAVVRPAANQVEMNPMWQQRTLRE 203          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: MORA_PSEPU (Morphine 6-dehydrogenase OS=Pseudomonas putida GN=morA PE=1 SV=3)

HSP 1 Score: 129.028 bits (323), Expect = 1.808e-29
Identity = 69/183 (37.70%), Postives = 108/183 (59.02%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKL 601
            LN G K+P++GLG + +      +A+A+AI +GYR ID A+ Y NE ++G  ++    ++ V R ++++T+KL+N  +  E    A D +L  L +DY+DLYL+HWP K    ++              +WKA E +   G+ARAIGV NF   +L +L+  + V PAVNQ+E HP + Q+ L
Sbjct:   10 LNNGVKMPALGLGVFAASAEETASAIASAISSGYRLIDTARSYNNEAQVGEGIR----NSGVDRAEMFVTTKLFNCDYGYERALRAFDESLGRLGLDYVDLYLLHWPTKDWNATI-------------QSWKAAEKILGDGRARAIGVCNFLEDQLDELIAASDVVPAVNQIELHPYFAQKPL 175          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: DKGA_CORSC (2,5-diketo-D-gluconic acid reductase A OS=Corynebacterium sp. (strain ATCC 31090) GN=dkgA PE=1 SV=3)

HSP 1 Score: 127.487 bits (319), Expect = 5.259e-29
Identity = 69/186 (37.10%), Postives = 102/186 (54.84%), Query Frame = 2
Query:   50 VLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKLRE 607
            VLN G  IP +G G ++  P     AV  A++ GYRHID A IYGNE+ +G  +      + + R+DL+IT+KLWN  H+ ++   A+  +L  L +D +DLYL+HWP       V               W+ M  L  +G  R+IGVSN     L  ++    V PAVNQ+E HP++QQ+++ +
Sbjct:    7 VLNDGNSIPQLGYGVFKVPPADTQRAVEEALEVGYRHIDTAAIYGNEEGVGAAIAA----SGIARDDLFITTKLWNDRHDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAADNYV-------------HAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGVVPAVNQIELHPAYQQREITD 175          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1CL_RAT (Aldo-keto reductase family 1 member C21 OS=Rattus norvegicus GN=Akr1c21 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.259e-29
Identity = 73/193 (37.82%), Postives = 106/193 (54.92%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNA---VAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN-----LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            LN G  IP +G GT          A      AI AG+ H D A +Y  E  +G  +++   +   +RED++ TSKLW     PE V  +L+ +L+ LQ+DY+DLYL+H+P+ +K G   F  +       D  D+ +TW+AME   D+G A++IGVSNF+ ++L  +L     +  P  NQVECH    Q KL
Sbjct:   10 LNDGHFIPVLGFGTAMPSELPKSKAKEVTKIAIDAGFHHFDSAFVYNTEDHVGEAIREKIANGTTRREDIFYTSKLWCTSLHPELVRSSLECSLKKLQLDYVDLYLIHFPMALKPGDENFPVDEHGKLLFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNRRQLEKILNKPGLKYKPVCNQVECHLYLNQMKL 202          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: DKGA_SALTY (2,5-diketo-D-gluconic acid reductase A OS=Salmonella typhimurium GN=dkgA PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.869e-29
Identity = 75/183 (40.98%), Postives = 100/183 (54.64%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKL 601
            L  G  +P +GLG W++    V  A+  A++ GYR ID A  Y NE+ +G  LK     A V RE+L+IT+KLWN   + +   EAL  +L+ LQ+DYLDLYLMHWPV      V               WK M AL   G  ++IGV NF    L  L++   V P +NQ+E HP  QQ++L
Sbjct:    9 LQDGNVMPQLGLGVWKASNEEVIAAIHKALEVGYRSIDTATAYQNEEGVGKALKA----ASVAREELFITTKLWN--DDQKRPREALQESLKKLQLDYLDLYLMHWPVPAIDHYV-------------DAWKGMIALQKEGLVKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQRQL 172          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: DKGA_ECOLI (2,5-diketo-D-gluconic acid reductase A OS=Escherichia coli (strain K12) GN=dkgA PE=1 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 6.869e-29
Identity = 75/183 (40.98%), Postives = 100/183 (54.64%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKL 601
            L  G  +P +GLG WQ+    V  A+  A++ GYR ID A  Y NE+ +G  LK    +A V RE+L+IT+KLWN  H+     EAL  +L+ LQ+DY+DLYLMHWPV      V               WK M  L   G  ++IGV NF    L  L++   V P +NQ+E HP  QQ++L
Sbjct:    9 LQDGNVMPQLGLGVWQASNEEVITAIQKALEVGYRSIDTAAAYKNEEGVGKALK----NASVNREELFITTKLWNDDHKRP--REALLDSLKKLQLDYIDLYLMHWPVPAIDHYV-------------EAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQRQL 172          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: DKGA_YERPE (2,5-diketo-D-gluconic acid reductase A OS=Yersinia pestis GN=dkgA PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.998e-28
Identity = 73/184 (39.67%), Postives = 104/184 (56.52%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWN-AYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKL 601
            L  G  +P +GLG WQ+       AV+ A++ GYR ID A IY NE+ +G  LK     A V R++L+IT+KLWN   H P+   +AL+ +L+ LQ+DY+DLYL+HWP   +   V             S W+ +  L + G  R+IGV NF    L  L++   + P VNQ+E HP  QQ++L
Sbjct:    9 LYDGRLMPQLGLGVWQASIQETELAVSKALEVGYRSIDTAAIYKNEEGVGKALKA----AAVARDELFITTKLWNDDQHNPQ---QALETSLQKLQLDYVDLYLIHWPDPKQDHYV-------------SAWRELVTLKEQGLIRSIGVCNFHIPHLQRLIDETGIAPTVNQIELHPLLQQRQL 172          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: DKGA_ECO57 (2,5-diketo-D-gluconic acid reductase A OS=Escherichia coli O157:H7 GN=dkgA PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.610e-28
Identity = 74/183 (40.44%), Postives = 98/183 (53.55%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKL 601
            L  G  +P +GLG WQ+    V  A+  A++ GYR  D A  Y NE+ +G  LK    +A V RE+L+IT+KLWN  H      EAL  +L+ LQ+DY+DLYLMHWPV      V               WK M  L   G  ++IGV NF    L  L++   V P +NQ+E HP  QQ++L
Sbjct:    9 LQDGNVMPQLGLGVWQASNEEVITAIQKALEVGYRSFDTAAAYKNEEGVGKALK----NASVNREELFITTKLWNDDHNRPR--EALLDSLKKLQLDYIDLYLMHWPVPAIDHYV-------------EAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQRQL 172          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: I3ACR_SCHPO (NAD/NADP-dependent indole-3-acetaldehyde reductase OS=Schizosaccharomyces pombe GN=SPAC19G12.09 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.452e-28
Identity = 70/176 (39.77%), Postives = 104/176 (59.09%), Query Frame = 2
Query:   71 IPSVGLGT--WQSDPGVVGNAVAAAIK----AGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHP 580
            +P+ G+GT  ++ + G +   +  ++K    AG+ HIDCA++YGNE+E+G+ LK    +A V R  L+ITSK+    H  +++PEAL+ +LR L  DYLDLYL+H P+          P    K  I   WKAME    +G   ++GVSNF    L +LL+ + + P VNQ+E HP
Sbjct:   12 VPAYGVGTALFKKEKGEINRTIVDSVKNALAAGFIHIDCAEVYGNEEEVGVALK----EANVPRSKLFITSKVM---HNVDNIPEALNESLRKLGTDYLDLYLLHSPI----------PFYEKKIPISEGWKAMETALGTGLVHSVGVSNFRIPDLEELLKTSTITPRVNQIEFHP 170          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: YER5_SCHPO (Uncharacterized oxidoreductase C2F3.05c OS=Schizosaccharomyces pombe GN=SPAC2F3.05c PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.191e-26
Identity = 68/184 (36.96%), Postives = 100/184 (54.35%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV-ARVPPAVNQVECHPSWQQQKL 601
            LN G K P    G++  +     ++V AA++ GYRHID AQ+Y NE + G  + KF E+   KRED+W TSKL N     +    ++D +++   + Y+DL+L+H P                  D   +WKA+E   + GK RAIGVSNF    + +LL+   ++ P VNQ+E HP   QQK+
Sbjct:    8 LNNGLKCPQFAYGSYMVNRTKCFDSVYAALQCGYRHIDSAQMYHNEADCGRAILKFMEETGTKREDIWFTSKL-NDLSGYKSTLSSIDASVKACGLGYIDLFLLHSPY----------------GDRIESWKALEKGVEEGKLRAIGVSNFGPHHIQELLDSHPKIIPCVNQIELHPFCSQQKV 174          
The following BLAST results are available for this feature:
BLAST of CX294559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
NADO2_ORYSJ1.808e-2942.78Probable NAD(P)H-dependent oxidoreductase 2 OS=Ory... [more]
MORA_PSEPU1.808e-2937.70Morphine 6-dehydrogenase OS=Pseudomonas putida GN=... [more]
DKGA_CORSC5.259e-2937.102,5-diketo-D-gluconic acid reductase A OS=Coryneba... [more]
AK1CL_RAT5.259e-2937.82Aldo-keto reductase family 1 member C21 OS=Rattus ... [more]
DKGA_SALTY6.869e-2940.982,5-diketo-D-gluconic acid reductase A OS=Salmonel... [more]
DKGA_ECOLI6.869e-2940.982,5-diketo-D-gluconic acid reductase A OS=Escheric... [more]
DKGA_YERPE1.998e-2839.672,5-diketo-D-gluconic acid reductase A OS=Yersinia... [more]
DKGA_ECO572.610e-2840.442,5-diketo-D-gluconic acid reductase A OS=Escheric... [more]
I3ACR_SCHPO4.452e-2839.77NAD/NADP-dependent indole-3-acetaldehyde reductase... [more]
YER5_SCHPO3.191e-2636.96Uncharacterized oxidoreductase C2F3.05c OS=Schizos... [more]

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Properties
Property NameValue
Genbank descriptionC05054C01SK FlavRip1 Citrus clementina cDNA clone C05054C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294559 ID=CX294559; Name=CX294559; organism=Citrus clementina; type=EST; length=608bp
TCTCTCTAACGCTTAGCTTTCGAAAATGGCAAATGAGATTCGACACTTCG
TGCTGAACACCGGAGCCAAAATCCCGTCCGTTGGATTAGGCACGTGGCAG
TCTGATCCTGGTGTCGTCGGCAACGCCGTTGCTGCCGCCATCAAGGCTGG
ATACCGACATATTGATTGTGCTCAAATTTACGGCAATGAAAAGGAGATTG
GTTTGGTGCTGAAGAAGTTTTTTGAAGATGCTGTTGTCAAGCGTGAGGAT
TTGTGGATTACCTCTAAACTCTGGAATGCTTATCATGAACCAGAAGATGT
ACCAGAGGCATTGGACAGAACTTTGCGGGACTTACAGATTGACTACCTTG
ATCTATACCTTATGCACTGGCCAGTTAAGATGAAGAAGGGGTCTGTTGGC
TTCAAGCCAGAAAACCTTGATAAACCAGATATACCTAGCACGTGGAAAGC
AATGGAGGCACTTTATGACTCTGGCAAGGCTCGAGCGATCGGAGTAAGCA
ATTTTTCTACAAAGAAGCTTGGAGATTTGTTGGAAGTGGCACGTGTGCCT
CCTGCTGTTAACCAAGTGGAATGCCATCCTTCATGGCAGCAGCAAAAGCT
TCGTGAAT
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