CX294560

Overview
NameCX294560
Unique NameCX294560
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.623e-27
Identity = 65/180 (36.11%), Postives = 100/180 (55.56%), Query Frame = 1
Query:   82 QEHGCSISTEC--KDILDTLLNIIQDKSVE--IETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQILS*IPF 609
            +EH    S E   +DI+D L  + +D  ++  I T  +K F  D F AG +T+S+T  W MAEL+ NP             +      +  D+  L Y+++VVKET+R+HP +PL+ PR   ++  + G+T+P  A++ +NVW++GR+   W+ P TF PERF   + DF G     IPF
Sbjct:  254 EEHKLKKSGEFGGEDIIDVLFRMQKDSQIKVPITTNAIKAFIFDTFSAGTETSSTTTLWVMAELMRNPEVMAKAQAEVRAALKGKTDWDVDDVQELKYMKSVVKETMRMHPPIPLI-PRSCREECEVNGYTIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGNDFEFIPF 432          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.617e-27
Identity = 59/167 (35.33%), Postives = 96/167 (57.49%), Query Frame = 1
Query:  115 KDILDTLLNIIQDKSVE--IETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQILS*IPF 609
            +DI+D L  + +D  ++  I T  +K F  D F AG +T+S+T  W +AEL+ NP             + +    +  D+  L Y+++VVKET+R+HP +PL+ PR   ++  + G+T+P  A++ +NVW++GR+   W+ P TF PERF   + DF G     +PF
Sbjct:  265 EDIIDVLFRMQKDTQIKVPITTNSIKAFIFDTFSAGTETSSTTTLWVLAELMRNPAVMAKAQAEVRAALKEKTNWDVDDVQELKYMKSVVKETMRMHPPIPLI-PRSCREECVVNGYTIPNKARIMINVWSMGRNPLYWEKPDTFWPERFDQVSKDFMGNDFEFVPF 430          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 8.174e-27
Identity = 56/169 (33.14%), Postives = 94/169 (55.62%), Query Frame = 1
Query:  115 KDILDTLLNIIQDKSVEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL----GSNADFKGQILS*IPF 609
            +D +  LL++ +D    + T ++K    ++F A  +T+   +E++M+EL++N                  + + E D++R+PYL+A +KE++R+HP  P LLP  +T D  I G+T+P G +V VN WA+ RD + WD    F PERFL     +  D  G+ +  +PF
Sbjct:  297 EDFVHLLLSLQKDYG--LTTDNIKGILVNMFEAAIETSFLVLEYSMSELMNNRHVLAKLQKEVRTATPDGRMVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALARDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPF 463          

HSP 2 Score: 27.7202 bits (60), Expect = 8.174e-27
Identity = 12/24 (50.00%), Postives = 16/24 (66.67%), Query Frame = 3
Query:  612 AGRRICPGLPLAIRMLHLMVGSLI 683
            AGRRIC G   AI  + +M+ +LI
Sbjct:  465 AGRRICAGATFAIATVEIMLANLI 488          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.052e-26
Identity = 63/175 (36.00%), Postives = 94/175 (53.71%), Query Frame = 1
Query:  100 ISTECKDILDTLLNIIQDK--SVEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKP--IEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTW-DNPHTFIPERFLGSNADFKGQILS*IPF 609
            +  E + ++D L+ I +++  + E    ++K    D+ +AG DT ++ + W M  L+  P           + + +     + E D+  LPY +A+VKETLR+ P +PLL+PR   +D  IAG+ +P G  V VN WA+ RDE  W  NP  F PERFL    DFKG     IPF
Sbjct:  261 VKPETESMIDLLMGIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPF 435          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.374e-26
Identity = 65/187 (34.76%), Postives = 106/187 (56.68%), Query Frame = 1
Query:   55 LVDQRLKHRQEHGCSISTECKDILDTLLNIIQDKSVEIE--TKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQILS*IPF 609
            L + R+K   E G       +DI+D L  + +D +++I   +  +K F  + F AG + +S+T+ WA++EL+ NP           + +     ++ S++  L Y+++VVKETLRLHP  PL+ PR++ ++  I GF +P   ++ +N W+IGRD   W++P TF PERF   + DF G     IPF
Sbjct:  248 LEEHRVKKNGEFGG------EDIVDVLFRMQKDSNIKIPITSNGIKGFIFNTFSAGAEASSTTISWALSELMRNPAKMAKVQAEVREALKGKTSVDLSEMQELKYMRSVVKETLRLHPPFPLI-PRQSREECEINGFYIPARTRILINAWSIGRDPLYWEDPDTFRPERFDEVSRDFMGNDFEFIPF 427          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C78A1_MAIZE (Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.384e-26
Identity = 70/197 (35.53%), Postives = 102/197 (51.78%), Query Frame = 1
Query:   37 LEVFDRLVDQRLKHRQEHGCSISTECKDILDTLLNIIQDKSVEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLL-LPRKATKDVAIA-GFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL----GSNADFKGQILS*IPF 609
            ++ F R V    + R+++  +++    D +D LL++  D+  ++    +     ++   G DTT+   EW MAEL+ +P             VG      ++D+ R+PYLQAVVKETLR HP  PLL   R AT DV +  G  VP G    VN+WAI  D + W +P  F PERFL    G++ D +G  L   PF
Sbjct:  290 VQTFVRGVIDEHRRRRQNSAALNDNA-DFVDVLLSLEGDE--KLGDDDMVAILWEMVFRGTDTTALLTEWCMAELVRHPAVQARVRAEVDAAVGAGGCPTDADVARMPYLQAVVKETLRAHPPGPLLSWARLATADVPLCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPF 483          

HSP 2 Score: 28.4906 bits (62), Expect = 1.384e-26
Identity = 13/32 (40.62%), Postives = 17/32 (53.12%), Query Frame = 3
Query:  588 DFELNSLRAGRRICPGLPLAIRMLHLMVGSLI 683
            D  L    AGRR+CPG  L +  + L V  L+
Sbjct:  477 DLRLAPFGAGRRVCPGKNLGLTTVGLWVARLV 508          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.347e-26
Identity = 66/184 (35.87%), Postives = 100/184 (54.35%), Query Frame = 1
Query:   73 KHRQEHGCSISTE-CKDILDTLLNIIQDKSVE-IETKHL-KHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADF--KGQILS*IPF 609
            +HRQ+       +  +D ++ +L+ +  K+++ I+   L K     +  AG + + ST+ WAM  +L NP           Q VGK + I ESDI+ L YLQAVVKETLRL+   PL  PR+  +D  + G+ V KG ++  N+W I  D + W +P  F P+RFL ++ D   KG     +PF
Sbjct:  273 EHRQKRALGEGVDGAQDFMNVMLSSLDGKTIDGIDADTLIKSTVLTIIQAGTEASISTIIWAMCLILKNPLILENKAELDIQ-VGKDRCICESDISNLVYLQAVVKETLRLYAPGPLSSPREFAEDCTLGGYHVKKGTRLITNIWKIHTDPNVWSDPFEFKPDRFLTTHKDIDVKGHHFQLLPF 455          

HSP 2 Score: 31.5722 bits (70), Expect = 2.347e-26
Identity = 11/31 (35.48%), Postives = 20/31 (64.52%), Query Frame = 3
Query:  591 FELNSLRAGRRICPGLPLAIRMLHLMVGSLI 683
            F+L    +GRR+CPG+   ++ +HL + S +
Sbjct:  450 FQLLPFGSGRRVCPGISFGLQTVHLALASFL 480          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C78AB_ORYSJ (Cytochrome P450 78A11 OS=Oryza sativa subsp. japonica GN=CYP78A11 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 3.973e-26
Identity = 69/189 (36.51%), Postives = 93/189 (49.21%), Query Frame = 1
Query:   61 DQRLKHRQEHGCSISTECKDILDTLLNIIQDKSVEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLL-LPRKATKDVAIA-GFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL----GSNADFKGQILS*IPF 609
            D RL+       S + +  D +D LL++  +    +    +     ++   G DTT+   EW MAE++ NP             VG      + D+ R+PYLQAVVKETLR HP  PLL   R AT DV +A G  VP G    VN+WAI  D   W +P  F PERF+    G++ D +G  L   PF
Sbjct:  305 DHRLRRDSS---STAADNADFVDVLLSL--EAHENLAEDDMVAVLWEMIFRGTDTTALVTEWCMAEVVRNPAVQARLRAEVDAAVGGDGCPSDGDVARMPYLQAVVKETLRAHPPGPLLSWARLATADVGLANGMVVPAGTTAMVNMWAITHDGEVWADPEAFAPERFIPSEGGADVDVRGGDLRLAPF 488          

HSP 2 Score: 28.4906 bits (62), Expect = 3.973e-26
Identity = 13/32 (40.62%), Postives = 17/32 (53.12%), Query Frame = 3
Query:  588 DFELNSLRAGRRICPGLPLAIRMLHLMVGSLI 683
            D  L    AGRR+CPG  L +  + L V  L+
Sbjct:  482 DLRLAPFGAGRRVCPGKNLGLATVTLWVARLV 513          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: CP17A_CHICK (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Gallus gallus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.999e-26
Identity = 63/185 (34.05%), Postives = 99/185 (53.51%), Query Frame = 1
Query:   31 KMLEVFDRLVDQRLKHRQEHGCSISTECKDILDTLL--------NIIQDKSVEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL 561
            + L+V D+L+ Q+    +E  C  +   +D++D LL        N   +  +E+   HL     D+F AG +TT++ ++WA+  LLH P           Q +G  +    SD   LPYL+A + E LR+ P  PLL+P  +  D +I  +++PKGA+V +N+W++  DE  WD P  F P RFL
Sbjct:  239 RCLKVRDQLLQQKFTEHKEAFCGDTV--RDLMDALLQVRLNAENNSPLEPGLELTDDHLLMTVGDIFGAGVETTTTVLKWAVLYLLHYPEVQKKIQEEMDQKIGLARHPHLSDRPLLPYLEATISEGLRIRPVSPLLIPHVSLADTSIGEYSIPKGARVVINLWSVHHDEKEWDKPEEFNPGRFL 421          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 8.766e-26
Identity = 64/206 (31.07%), Postives = 103/206 (50.00%), Query Frame = 1
Query:    1 IKRRITVYSAKMLEVFDRLVDQRLKHRQEHGCSISTECKDILDTLLNIIQDKSVEIE--TKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIE-ESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQILS*IPF 609
            ++ R+     ++  VFD+++ Q  +H+ +           +++ LL I     +E    T ++K    D+F  G +TTSS  EW M+EL+ NP           +      P + E  I  L Y++ V+KET+RL+P +PLL+P    +   I G+ V +G +V +N WA+ R    WD+   F PERF    AD+KG     +PF
Sbjct:  266 LRSRLWRARGQLDSVFDKIIAQCEEHQGD----------SLVNVLLRIRDQGDLEFPFGTTNIKAIILDMFTGGTETTSSAAEWVMSELMRNPEVMAKVQAEVRRVFDNKSPQDHEGLIDNLRYMKMVIKETMRLNPVLPLLMPHLCRETCDIGGYEVVEGTRVVINSWAMARSPEYWDDAEEFKPERFEDGMADYKGSRFEYLPF 461          

HSP 2 Score: 24.6386 bits (52), Expect = 8.766e-26
Identity = 12/31 (38.71%), Postives = 16/31 (51.61%), Query Frame = 3
Query:  591 FELNSLRAGRRICPGLPLAIRMLHLMVGSLI 683
            FE      GRR CPG    + +L L+V  L+
Sbjct:  456 FEYLPFGTGRRRCPGDTFGMVLLELIVARLL 486          
The following BLAST results are available for this feature:
BLAST of CX294560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 478
Match NameE-valueIdentityDescription
C71DD_MENPI1.623e-2736.11Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
C71DF_MENPI3.617e-2735.33Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C71C1_MAIZE8.174e-2733.14Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C83A1_ARATH1.052e-2636.00Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C7D94_MENGR1.374e-2634.76Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]
C78A1_MAIZE1.384e-2635.53Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 S... [more]
C82A4_SOYBN2.347e-2635.87Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]
C78AB_ORYSJ3.973e-2636.51Cytochrome P450 78A11 OS=Oryza sativa subsp. japon... [more]
CP17A_CHICK3.999e-2634.05Steroid 17-alpha-hydroxylase/17,20 lyase OS=Gallus... [more]
C99A2_ORYSJ8.766e-2631.07Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]

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Properties
Property NameValue
Genbank descriptionC05054C02SK FlavRip1 Citrus clementina cDNA clone C05054C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294560 ID=CX294560; Name=CX294560; organism=Citrus clementina; type=EST; length=684bp
ATAAAGCGCCGCATCACAGTTTATAGTGCCAAGATGCTCGAGGTGTTTGA
TCGCTTGGTTGATCAACGATTGAAGCATAGACAAGAACATGGTTGCAGTA
TTAGCACCGAATGTAAAGATATATTAGATACTCTTCTCAATATTATCCAA
GACAAGAGTGTTGAGATTGAAACAAAACATCTCAAGCACTTTTTTGCGGA
TTTGTTTATTGCGGGGAATGACACAACTTCAAGTACAATGGAATGGGCAA
TGGCAGAACTACTCCACAACCCTGAGGCTTTATTGAAAGCAAAATTGGAG
CTAGAACAAACAGTTGGCAAGTGTAAACCAATTGAGGAATCTGACATCAC
TCGGCTACCTTATCTACAAGCTGTTGTTAAAGAAACTTTGAGATTGCACC
CTGCAGTTCCCTTATTACTTCCCCGCAAAGCCACAAAAGATGTTGCAATT
GCAGGCTTCACAGTGCCAAAAGGTGCACAAGTTTTTGTCAATGTATGGGC
TATTGGCAGAGATGAAAGCACATGGGACAACCCACACACTTTTATTCCCG
AAAGGTTCTTAGGGTCAAATGCTGATTTCAAAGGCCAGATTTTGAGCTAA
ATTCCCTTCGAGCTGGACGACGAATTTGTCCTGGTTTACCATTGGCAATC
AGAATGTTACATCTAATGGTGGGTTCACTTATTA
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