CX294560

Overview
NameCX294560
Unique NameCX294560
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.489e-35
Identity = 69/168 (41.07%), Postives = 97/168 (57.74%), Query Frame = 1
Query:  118 DILDTLL-NIIQDKSVEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL---GSNADFKGQILS*IPF 609
            D LD ++ N    +   + T ++K    +LF AG DT+SS +EWA+AE++ NP           Q +G  + + ESDI  LPYL+A+ KET R HP+ PL LPR + +   + G+ +PK  ++ VN+WAIGRD   W+NP  F PERFL    S  D +G     IPF
Sbjct:  269 DFLDCVMENRDNSEGERLSTTNIKALLLNLFTAGTDTSSSAIEWALAEMMKNPAILKKAQGEMDQVIGNNRRLLESDIPNLPYLRAICKETFRKHPSTPLNLPRISNEPCIVDGYYIPKNTRLSVNIWAIGRDPEVWENPLEFYPERFLSGRNSKIDPRGNDFELIPF 436          

HSP 2 Score: 33.113 bits (74), Expect = 3.489e-35
Identity = 15/32 (46.88%), Postives = 21/32 (65.62%), Query Frame = 3
Query:  588 DFELNSLRAGRRICPGLPLAIRMLHLMVGSLI 683
            DFEL    AGRRIC G  + I M+  ++G+L+
Sbjct:  430 DFELIPFGAGRRICAGTRMGIVMVEYILGTLV 461          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.489e-35
Identity = 69/168 (41.07%), Postives = 98/168 (58.33%), Query Frame = 1
Query:  118 DILDTLL-NIIQDKSVEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL---GSNADFKGQILS*IPF 609
            D LD ++ N    +   + T ++K    +LF AG DT+SS +EWA+AE++ NP           Q +G+ + + ESDI  LPYL+A+ KET R HP+ PL LPR + +   + G+ +PK  ++ VN+WAIGRD   W+NP  F PERFL    S  D +G     IPF
Sbjct:  269 DFLDVVMENGDNSEGERLSTTNIKALLLNLFTAGTDTSSSAIEWALAEMMKNPAILKKAQAEMDQVIGRNRRLLESDIPNLPYLRAICKETFRKHPSTPLNLPRISNEPCIVDGYYIPKNTRLSVNIWAIGRDPQVWENPLEFNPERFLSGRNSKIDPRGNDFELIPF 436          

HSP 2 Score: 33.113 bits (74), Expect = 3.489e-35
Identity = 15/32 (46.88%), Postives = 21/32 (65.62%), Query Frame = 3
Query:  588 DFELNSLRAGRRICPGLPLAIRMLHLMVGSLI 683
            DFEL    AGRRIC G  + I M+  ++G+L+
Sbjct:  430 DFELIPFGAGRRICAGTRMGIVMVEYILGTLV 461          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.711e-35
Identity = 70/169 (41.42%), Postives = 100/169 (59.17%), Query Frame = 1
Query:  115 KDILDTLLNIIQDKSV----EIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQILS*IPF 609
            +D +D LL + ++++V    ++   H+K    D+ +AG DT++ TM WAM EL  NP             +G    I   D+ +L YL+ V+KET RLHP  PLLLPR+A  +  I G+T+P   ++ VNVWAIGRD  TW +P  F+PERF+ +N D KGQ    +PF
Sbjct:  264 EDFVDLLLRLEKEEAVLGNDKLTRNHIKAILLDVLLAGIDTSAITMTWAMTELARNPRVMKKVQSEIRTQMGNRSMISFEDMDQLEYLKMVIKETWRLHPTTPLLLPREAMSEFDINGYTIPVKTRLHVNVWAIGRDPDTWKDPEVFLPERFMDNNIDAKGQHFELLPF 432          

HSP 2 Score: 25.7942 bits (55), Expect = 7.711e-35
Identity = 11/31 (35.48%), Postives = 17/31 (54.84%), Query Frame = 3
Query:  591 FELNSLRAGRRICPGLPLAIRMLHLMVGSLI 683
            FEL     GRRICP + +   M+   + +L+
Sbjct:  427 FELLPFGGGRRICPAIYMGTTMVEFGLANLL 457          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 1.004e-34
Identity = 67/161 (41.61%), Postives = 96/161 (59.63%), Query Frame = 1
Query:  115 KDILDTLLNIIQDKSVEIETK--HLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQI 591
            +D LD LL+  +D++ EI+ +  H+K    D F AG DTT+ + EWA+ EL+  P             VGK + +EESD   LPYLQA++KET RLHP VP ++ R+   +  +  + +P+ + +FVNVW+IGR+   WDNP  F PERFL    D  G +
Sbjct:  270 RDFLDILLDCTEDENSEIKIQRVHIKALIMDFFTAGTDTTAISTEWALVELVKKPSVLQKVREEIDNVVGKDRLVEESDCPNLPYLQAILKETFRLHPPVP-MVTRRCVAECTVENYVIPEDSLLFVNVWSIGRNPKFWDNPLEFRPERFLKLEGDSSGVV 429          

HSP 2 Score: 30.8018 bits (68), Expect = 1.004e-34
Identity = 12/31 (38.71%), Postives = 23/31 (74.19%), Query Frame = 3
Query:  591 FELNSLRAGRRICPGLPLAIRMLHLMVGSLI 683
            F+L    +GRR+CPG+ LA++ +  ++G++I
Sbjct:  436 FQLLPFGSGRRMCPGVSLAMQEVPALLGAII 466          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.050e-34
Identity = 79/195 (40.51%), Postives = 114/195 (58.46%), Query Frame = 1
Query:   43 VFDRLVDQRLKHRQEHGCSISTECKDILDTLLNII----QDKSVEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVG--KCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQILS*IPF 609
            + + ++D  LK+  E    I+ +  DI+D+LL++I    Q  S ++   +LK    D+++AG DT++ TM WAMAEL+ NP             +G  + + IEE D+ +L YL+ VVKETLRLHPA PLLLPR+    + I G+ +P    + VNVW+IGRD   W NP  F PERF+    D+KG     +PF
Sbjct:  244 LLNHIIDDHLKNSIEE---ITHDRPDIIDSLLDMIRKQEQGDSFKLTIDNLKGIIQDIYLAGVDTSAITMIWAMAELVKNPRVMKKVQDEIRTCIGIKQNEKIEEDDVDKLQYLKLVVKETLRLHPAAPLLLPRETMSQIKIQGYNIPSKTILLVNVWSIGRDPKHWKNPEEFNPERFIDCPIDYKGNSFEMLPF 435          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.371e-34
Identity = 78/208 (37.50%), Postives = 123/208 (59.13%), Query Frame = 1
Query:   10 RITVYSAKMLEVF---DRLVDQRLKHRQEHGCSISTECKDILDTLLNII----QDKSVEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKP-IEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQILS*IPF 609
            +IT  S  + E+F   D   +Q L    + G  +  E  D++D +++++    QD S ++ T H+K   +D+F+AG +T+++T+ WAM EL+ NP             +G+ +  I E D+ +L Y + V+KET RLHPA PLLLPR+A   + I G+ +P+  Q+ VNV+AIGRD   W+NP  F PERF+ S+ D++G     +PF
Sbjct:  230 KITGQSKSLNEIFADLDGFFNQVLDDHLKPGRKV-LETPDVVDVMIDMMNKQSQDGSFKLTTDHIKGIISDIFLAGVNTSATTILWAMTELIRNPRVMKKVQDEVRTVLGEKRDRITEQDLNQLNYFKLVIKETFRLHPAAPLLLPREAMAKIKIQGYDIPEKTQIMVNVYAIGRDPDLWENPEEFKPERFVDSSVDYRGLNFELLPF 436          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.791e-34
Identity = 79/200 (39.50%), Postives = 120/200 (60.00%), Query Frame = 1
Query:   31 KMLEVFDRLVDQRLK-HRQEHGCSISTEC----KDILDTLLNIIQDKSVE--IETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQILS*IPF 609
            K+ + FD +V+  LK H+++    +S E     +D++D LLNI +    E  +  K++K    ++F AG +T+S+T++WAM E++ NP           +   +   ++E+ + +L YLQAV+KETLRLHP VPLLLPR+  +   I G+T+P  ++V VN WAIGRD + W  P  F P+RFL S  DFKG     +PF
Sbjct:  230 KIHKQFDVIVETILKGHKEKINKPLSQENGEKKEDLVDVLLNIQRRNDFEAPLGDKNIKAIIFNIFSAGTETSSTTVDWAMCEMIKNPTVMKKAQEEVRKVFNEEGNVDETKLHQLKYLQAVIKETLRLHPPVPLLLPRECREQCKIKGYTIPSKSRVIVNAWAIGRDPNYWIEPEKFNPDRFLESKVDFKGNSFEYLPF 429          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.339e-34
Identity = 71/137 (51.82%), Postives = 89/137 (64.96%), Query Frame = 1
Query:  199 DLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQILS*IPF 609
            +LF AG +T++ST+EWAM EL  NP             VG+ + ++ESD   LPYL+A VKETLRLHP  PLLLPR+A +   I  +T+PK  Q+ VN W IGRD  TW +P TF PERFL S+ DF+G   S IPF
Sbjct:  287 ELFGAGTETSASTIEWAMTELTKNPKITAKIRSEIQTVVGE-RSVKESDFPNLPYLEATVKETLRLHPPTPLLLPRRALETCTILNYTIPKDCQIMVNAWGIGRDPKTWTDPLTFSPERFLNSSVDFRGNDFSLIPF 422          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.055e-34
Identity = 76/186 (40.86%), Postives = 106/186 (56.99%), Query Frame = 1
Query:   52 RLVDQRLKHRQEHGCSISTECKDILDTLLNIIQDKSVEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQILS*IPF 609
            +++++  K  +E G       +  +D L  + Q   +  +T  +     D+  AG DTT  ++EWAMAEL+ NP           + VG+ + + E+D   LPYLQAVVKE+LRLHP  PL+LP KA+ +V I G+ +PKGA V VNVWA+ RD   W NP  + PERFL  N D KG     +PF
Sbjct:  256 KIIEEHAKSLKESGAK-----QHFVDALFTLKQQYDLSEDT--VIGLLWDMITAGMDTTVISVEWAMAELVRNPRVQKKLQEELDRVVGRDRVMLETDFQNLPYLQAVVKESLRLHPPTPLMLPHKASTNVKIGGYDIPKGANVMVNVWAVARDPKVWSNPLEYRPERFLEENIDIKGSDFRVLPF 434          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.765e-34
Identity = 75/199 (37.69%), Postives = 110/199 (55.28%), Query Frame = 1
Query:   25 SAKMLEVFDRLVDQRLKHRQEHGCSISTECKDILDTLLNIIQDKSV----EIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQILS*IPF 609
            S + L+ F   +    K ++E G       +D +D LL + ++++V    ++   H+K    D+ +AG DT++ TM WAMAEL  NP             +   + I   D  +L YL+ V+KET RLHP  PLL+PR+A  +  I G+T+P   ++ VNVWAIGRD  TW +P  F+PERF  +N D KGQ    +PF
Sbjct:  241 SMRDLDAFYEQMFDLHKQKKEEGS------EDFVDLLLRLEKEEAVLGNDKLTRNHIKAILMDVLLAGMDTSAITMTWAMAELAKNPRVMKKVQSEIRSQIKNKERISFDDTDKLEYLKMVIKETWRLHPTTPLLIPREAMSEFEINGYTIPVKTRLHVNVWAIGRDPDTWKDPEVFLPERFTDNNIDAKGQHFELLPF 433          

HSP 2 Score: 24.2534 bits (51), Expect = 3.765e-34
Identity = 10/31 (32.26%), Postives = 17/31 (54.84%), Query Frame = 3
Query:  591 FELNSLRAGRRICPGLPLAIRMLHLMVGSLI 683
            FEL     GRR+CP + +   M+   + +L+
Sbjct:  428 FELLPFGGGRRMCPAVYMGTTMVEFGLANLL 458          
The following BLAST results are available for this feature:
BLAST of CX294560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 478
Match NameE-valueIdentityDescription
C75A3_PETHY3.489e-3541.07Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]
C75A1_PETHY3.489e-3541.07Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida G... [more]
C71BW_ARATH7.711e-3541.42Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C93B1_GLYEC1.004e-3441.61Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C71BO_ARATH1.050e-3440.51Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C71BN_ARATH1.371e-3437.50Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C71DC_CATRO1.791e-3439.50Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C80B1_ESCCA2.339e-3451.82(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C98A1_SORBI3.055e-3440.86Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C71BV_ARATH3.765e-3437.69Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC05054C02SK FlavRip1 Citrus clementina cDNA clone C05054C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294560 ID=CX294560; Name=CX294560; organism=Citrus clementina; type=EST; length=684bp
ATAAAGCGCCGCATCACAGTTTATAGTGCCAAGATGCTCGAGGTGTTTGA
TCGCTTGGTTGATCAACGATTGAAGCATAGACAAGAACATGGTTGCAGTA
TTAGCACCGAATGTAAAGATATATTAGATACTCTTCTCAATATTATCCAA
GACAAGAGTGTTGAGATTGAAACAAAACATCTCAAGCACTTTTTTGCGGA
TTTGTTTATTGCGGGGAATGACACAACTTCAAGTACAATGGAATGGGCAA
TGGCAGAACTACTCCACAACCCTGAGGCTTTATTGAAAGCAAAATTGGAG
CTAGAACAAACAGTTGGCAAGTGTAAACCAATTGAGGAATCTGACATCAC
TCGGCTACCTTATCTACAAGCTGTTGTTAAAGAAACTTTGAGATTGCACC
CTGCAGTTCCCTTATTACTTCCCCGCAAAGCCACAAAAGATGTTGCAATT
GCAGGCTTCACAGTGCCAAAAGGTGCACAAGTTTTTGTCAATGTATGGGC
TATTGGCAGAGATGAAAGCACATGGGACAACCCACACACTTTTATTCCCG
AAAGGTTCTTAGGGTCAAATGCTGATTTCAAAGGCCAGATTTTGAGCTAA
ATTCCCTTCGAGCTGGACGACGAATTTGTCCTGGTTTACCATTGGCAATC
AGAATGTTACATCTAATGGTGGGTTCACTTATTA
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