CX294560

Overview
NameCX294560
Unique NameCX294560
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C520A_DICDI (Probable cytochrome P450 520A1 OS=Dictyostelium discoideum GN=cyp520a1 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.129e-12
Identity = 51/192 (26.56%), Postives = 92/192 (47.92%), Query Frame = 1
Query:    4 KRRITVYSAKMLEVFDRLVDQRLKHRQEHGCSISTECKDILDTLLNII---QDKSVEIETKHLK-HFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGK-CKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKD-VAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL 561
            K RI+ ++  +  + D +  + +  +Q     I+ E ++I+D L++      D+  E+  + L      D+ +A  DT++ST+EW M  +++NP             VGK C  +   D+ +L  ++A   E LR+ P   L LPR + +D   +    +PK   +  N++ +G  E    NP  F P R+L
Sbjct:  236 KNRISTFTNHLNVIKDFI--RSIYKQQIKTFDINIEPRNIMDCLISEYYEDDDQEDEVAKQELIIQLCIDMLVAATDTSASTLEWFMLFMINNPNLQEDLYEEVVNVVGKDCPYVTFDDVPKLALIKACYFEILRIRPVTSLSLPRVSMEDTTTLNDIFIPKDTIIIQNIFGMGNSEKFVSNPTVFNPSRWL 425          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C515B_DICDI (Probable cytochrome P450 515B1 OS=Dictyostelium discoideum GN=cyp515b1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.129e-12
Identity = 48/158 (30.38%), Postives = 74/158 (46.84%), Query Frame = 1
Query:  133 LLNIIQDKSVEIETKHLKHFFADLFIAGNDTTSSTMEW---------AMAELLHNPXXXXXXXXXXXQTVGKC------KPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL 561
            +L I  D S  I+   +++   DL + G D+TSS +EW         ++ E L+N             T          K IE+++    P   A VKETLR  P VPL LP   ++D  I G+ +PKG Q+  N+++    +  + +P  F P RF+
Sbjct:  267 ILQIRSDPSQTIKIDAIQYIVLDLLVGGTDSTSSALEWMILFLSNHESIQEKLYNEICKNTNTNTTATTTENDNESYFPKLIEKNNY---PLFNACVKETLRRSPPVPLGLPHLCSEDTEIGGYLIPKGTQIISNIYSASNCDKVFTDPLEFNPLRFI 421          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C13B1_CAEEL (Putative cytochrome P450 cyp-13B1 OS=Caenorhabditis elegans GN=cyp-13B1 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.129e-12
Identity = 55/205 (26.83%), Postives = 97/205 (47.32%), Query Frame = 1
Query:   31 KMLEVFDRLVDQRLKHRQEHG-CSISTECKDILDTLLNIIQDKSVEIE---TKHLKHFFADLF-------IAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTW-DNPHTFIPERFLGSNADFKGQILS*IPF 609
            K+L +  + V+ R++ R+E+          D +D  LN   ++  +IE   T   K    D+        +AG DTT++++ +A   L  +P             VG  + +   D+T+L YL AVV+E+LRL+P       R+  K   +    + KG ++  +V ++ R +  W +N   F+PER+L  ++      +S IPF
Sbjct:  249 KLLLICKKTVESRIQEREENAKLGFENAENDFIDMFLNYYSEQVEDIEFGSTVEKKVTAEDVIGACFVFLLAGFDTTANSLAYASYLLAKHPEKMKLAQEEVDTVVGS-ENVSYDDMTKLKYLDAVVRESLRLYPVAWFACSRECVKPTTLGDIYIDKGVKIEADVMSLHRSKEIWGENADDFVPERWLEPSS---RHTMSWIPF 449          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: CP4AA_MOUSE (Cytochrome P450 4A10 OS=Mus musculus GN=Cyp4a10 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 41/147 (27.89%), Postives = 65/147 (44.22%), Query Frame = 1
Query:  118 DILDTLLNIIQDKSVEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERF 558
            D LD LL    +    +  K L+         G+DTT+S + W    L  +P             +G    I    + ++PY    +KE LRL+P VP ++   +T      G ++PKG QV ++++ +  +   W NP  F P RF
Sbjct:  289 DFLDILLFARMENGDSMSDKDLRAEVDTFMFEGHDTTASGVSWIFYALATHPDHQQRCREEVQSLLGDGSSITWDHLDQIPYTTMCIKEALRLYPPVPGIVRELSTSVTFPDGRSLPKGVQVTLSIYGLHHNPKVWPNPEVFDPSRF 435          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: CP2K3_ONCMY (Cytochrome P450 2K3 OS=Oncorhynchus mykiss GN=cyp2k3 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 46/165 (27.88%), Postives = 74/165 (44.85%), Query Frame = 1
Query:  112 CKDILDTLLNIIQDKSVEIETKHLKHFFAD---------LFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADF 579
            C+  +D+ L  ++ +++E E+ H+  F+ D         LF AG DTT +T+ W +  +   P             +G  + + E D   LPY  AV+ ET RL    P+ +P   ++DV   G+ + K             D+S W++PHT  P  FL     F
Sbjct:  271 CRGFVDSFL--VRKQTLE-ESGHMDSFYHDDNLVFSVGNLFSAGTDTTGTTLRWGLLLMTKYPHIQDQVQEEISGVIGSRQTLVE-DRKNLPYTDAVIHETQRLANIAPMSIPHTTSRDVTFQGYFIKK-------------DDSEWESPHTLTPSHFLDEKGGF 418          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: CP4CA_MOUSE (Cytochrome P450 4A12A OS=Mus musculus GN=Cyp4a12a PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.927e-12
Identity = 40/147 (27.21%), Postives = 65/147 (44.22%), Query Frame = 1
Query:  118 DILDTLLNIIQDKSVEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERF 558
            D LD LL    +    +  K L+         G+DTT+S + W    L  NP             +G    I  +D+ ++PY    +KE LR++P VP +    ++      G ++PKG  V ++ + +  + + W NP  F P RF
Sbjct:  288 DFLDILLFARMENGKSLSDKDLRAEVDTFMFEGHDTTASGISWIFYALATNPEHQQRCRKEIQSLLGDGTSITWNDLDKMPYTTMCIKEALRIYPPVPSVSRELSSPVTFPDGRSLPKGIHVMLSFYGLHHNPTVWPNPEVFDPSRF 434          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: CP4A4_RABIT (Cytochrome P450 4A4 OS=Oryctolagus cuniculus GN=CYP4A4 PE=1 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 1.927e-12
Identity = 49/179 (27.37%), Postives = 79/179 (44.13%), Query Frame = 1
Query:   49 DRLVDQRLKHRQEHGCSISTECK---DILDTLLNIIQDKSVEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIA-GFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNA 573
            DR++ QR    Q+ G       K   D LD LL    +    +  + L+         G+DTT+S + W    L  +P             +G    I    + ++PY    +KE LRL+P VP  + R+ +K V    G ++PKG  +F++++ +  +   W NP  F P RF   +A
Sbjct:  264 DRVIQQRKAQLQQEGELEKVRRKRRLDFLDVLLFAKMENGSSLSDQDLRAEVDTFMFEGHDTTASGVSWIFYALATHPEHQHRCREEIQGLLGDGASITWEHLDQMPYTTMCIKEALRLYPPVP-SVTRQLSKPVTFPDGRSLPKGVILFLSIYGLHYNPKVWQNPEVFDPFRFAPDSA 441          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: CP3AO_SHEEP (Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.927e-12
Identity = 52/179 (29.05%), Postives = 77/179 (43.02%), Query Frame = 1
Query:   52 RLVDQRLKHRQEHGCSISTECKDILDTLLNIIQDKSVE----IETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNAD 576
            R+ + RLK  Q+          D L  ++N    K  +    +  + L         AG +TTS+T+ + +  L  +P            T     P     + ++ YL  VV ETLR+ P + + L R   KDV I G ++PKG  V V ++ + RD   W  P  F PERF   N D
Sbjct:  255 RIKESRLKDNQKPRV-------DFLQLMINSQNSKETDNHKALSDQELMAQSVIFIFAGYETTSNTLSFLLYILATHPDVQQKLQEEIDATFPNKAPPTYDVLAQMEYLDMVVNETLRMFP-IAVRLDRLCKKDVEIHGVSIPKGTAVTVPIFVLHRDPQLWPEPEEFRPERFSKKNKD 425          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: CP2B3_RAT (Cytochrome P450 2B3 OS=Rattus norvegicus GN=Cyp2b3 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.927e-12
Identity = 44/160 (27.50%), Postives = 77/160 (48.12%), Query Frame = 1
Query:  115 KDILDTLLNIIQDKSVEIETK----HLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFK 582
            +D +DT L  ++ + +   T+    +L      LF+AG ++TS+T+ +    +L  P           Q +G  +     D +++PY +AV+ E  R     P+ LP + TKD    G+ +PK  +V+  + +   D   ++ P TF PE FL +N   K
Sbjct:  262 RDFIDTFLLHMEKEKLNHYTEFHHWNLMISVLFLFLAGTESTSNTLCYGFLLMLKYPHVAEKVQKEIDQVIGSQRVPTLDDRSKMPYTEAVIHEIQRFSDVSPMGLPCRITKDTLFRGYLLPKNTEVYFILSSALHDPQYFEQPDTFNPEHFLDANGALK 421          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: ORDA_ASPPA (O-methylsterigmatocystin oxidoreductase OS=Aspergillus parasiticus GN=ordA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.931e-12
Identity = 39/122 (31.97%), Postives = 57/122 (46.72%), Query Frame = 1
Query:  196 ADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL 561
            A+  + G+DTT S +      +   P           + VG          ++LP++ A+VKE  R HPA PL  P    +D    G+ +PKGA +  N+W    D S + +P  F PERFL
Sbjct:  296 AEFVMGGSDTTVSAVSSFFVAMALYPEVQHQAREELDRVVGPTTLATFEHRSQLPFIDALVKEVFRWHPASPLGAPHITQEDQIWDGYLLPKGALLLPNIWTFTHDPSVYHDPMVFKPERFL 417          

HSP 2 Score: 20.7866 bits (42), Expect = 1.931e-12
Identity = 7/7 (100.00%), Postives = 7/7 (100.00%), Query Frame = 3
Query:  615 GRRICPG 635
            GRRICPG
Sbjct:  436 GRRICPG 442          
The following BLAST results are available for this feature:
BLAST of CX294560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 478
Match NameE-valueIdentityDescription
C520A_DICDI1.129e-1226.56Probable cytochrome P450 520A1 OS=Dictyostelium di... [more]
C515B_DICDI1.129e-1230.38Probable cytochrome P450 515B1 OS=Dictyostelium di... [more]
C13B1_CAEEL1.129e-1226.83Putative cytochrome P450 cyp-13B1 OS=Caenorhabditi... [more]
CP4AA_MOUSE1.475e-1227.89Cytochrome P450 4A10 OS=Mus musculus GN=Cyp4a10 PE... [more]
CP2K3_ONCMY1.475e-1227.88Cytochrome P450 2K3 OS=Oncorhynchus mykiss GN=cyp2... [more]
CP4CA_MOUSE1.927e-1227.21Cytochrome P450 4A12A OS=Mus musculus GN=Cyp4a12a ... [more]
CP4A4_RABIT1.927e-1227.37Cytochrome P450 4A4 OS=Oryctolagus cuniculus GN=CY... [more]
CP3AO_SHEEP1.927e-1229.05Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2... [more]
CP2B3_RAT1.927e-1227.50Cytochrome P450 2B3 OS=Rattus norvegicus GN=Cyp2b3... [more]
ORDA_ASPPA1.931e-1231.97O-methylsterigmatocystin oxidoreductase OS=Aspergi... [more]

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Properties
Property NameValue
Genbank descriptionC05054C02SK FlavRip1 Citrus clementina cDNA clone C05054C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294560 ID=CX294560; Name=CX294560; organism=Citrus clementina; type=EST; length=684bp
ATAAAGCGCCGCATCACAGTTTATAGTGCCAAGATGCTCGAGGTGTTTGA
TCGCTTGGTTGATCAACGATTGAAGCATAGACAAGAACATGGTTGCAGTA
TTAGCACCGAATGTAAAGATATATTAGATACTCTTCTCAATATTATCCAA
GACAAGAGTGTTGAGATTGAAACAAAACATCTCAAGCACTTTTTTGCGGA
TTTGTTTATTGCGGGGAATGACACAACTTCAAGTACAATGGAATGGGCAA
TGGCAGAACTACTCCACAACCCTGAGGCTTTATTGAAAGCAAAATTGGAG
CTAGAACAAACAGTTGGCAAGTGTAAACCAATTGAGGAATCTGACATCAC
TCGGCTACCTTATCTACAAGCTGTTGTTAAAGAAACTTTGAGATTGCACC
CTGCAGTTCCCTTATTACTTCCCCGCAAAGCCACAAAAGATGTTGCAATT
GCAGGCTTCACAGTGCCAAAAGGTGCACAAGTTTTTGTCAATGTATGGGC
TATTGGCAGAGATGAAAGCACATGGGACAACCCACACACTTTTATTCCCG
AAAGGTTCTTAGGGTCAAATGCTGATTTCAAAGGCCAGATTTTGAGCTAA
ATTCCCTTCGAGCTGGACGACGAATTTGTCCTGGTTTACCATTGGCAATC
AGAATGTTACATCTAATGGTGGGTTCACTTATTA
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