CX294560

Overview
NameCX294560
Unique NameCX294560
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.392e-31
Identity = 76/194 (39.18%), Postives = 110/194 (56.70%), Query Frame = 1
Query:   46 FDRLVDQRLKHRQEHGCSISTE--CKDILDTLL-NIIQDKSVEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL---GSNADFKGQILS*IPF 609
            FD L+ + L   +EH  S        D LD ++ N    +   + T ++K    ++F AG DT+SS +EWA+AELL NP             +G+ +   E+DI++LPYLQA+ KE  R HP+ PL LPR A++   + G  +PKG ++ VN+WAIGRD S W+NP+ F P+RFL    +  D +G     IPF
Sbjct:  250 FDALLTRLL---EEHTASAHERKGSPDFLDFVVANRDNSEGERLHTVNIKALLLNMFTAGTDTSSSVIEWALAELLKNPIILKRAQEEMDGVIGRDRRFLEADISKLPYLQAICKEAFRKHPSTPLNLPRIASQACEVNGHYIPKGTRLSVNIWAIGRDPSLWENPNEFNPDRFLERKNAKIDPRGNDFELIPF 440          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C81D1_ARATH (Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 6.133e-31
Identity = 62/147 (42.18%), Postives = 93/147 (63.27%), Query Frame = 1
Query:  121 ILDTLLNIIQDKSVEIETKHL-KHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERF 558
            ++D LL ++Q   +E  T  + K     + IAG +T++ T+EWA++ LL++P             VG  + IEE+D++ LPYL+ +V ETLRLHPA PLL+P  A++D  I  + +P+G  + VN WAI RD +TWD+P +F PERF
Sbjct:  276 MIDHLL-VLQKSDIEYYTDQIIKGIILIMVIAGTNTSAVTLEWALSNLLNHPDVISKARDEIDNRVGLDRLIEEADLSELPYLKNIVLETLRLHPATPLLVPHMASEDCKIGSYDMPRGTTLLVNAWAIHRDPNTWDDPDSFKPERF 421          

HSP 2 Score: 29.6462 bits (65), Expect = 6.133e-31
Identity = 14/23 (60.87%), Postives = 17/23 (73.91%), Query Frame = 3
Query:  615 GRRICPGLPLAIRMLHLMVGSLI 683
            GRR CPG  LA R++ L +GSLI
Sbjct:  436 GRRACPGSGLAQRIVGLALGSLI 458          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 7.987e-31
Identity = 72/207 (34.78%), Postives = 113/207 (54.59%), Query Frame = 1
Query:   10 RITVYSAKMLEVFDRLVDQRLKHRQEHGCSISTECKDILDTLLNIIQDKS--VEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKP----IEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTW-DNPHTFIPERFLGSNADFKGQILS*IPF 609
            RI  +++K++EV     D   K  QEH         D ++ LL+I ++K+   +++   +K    D+FI G  T+S+ +EW M EL+ NP            T+   +P    I+E ++  + YL+AV+KE  R+HP +PL+LPR  T+DV + G+ +  G +V +N W+I RD + W  +   F PER L S  D+ GQ L  IPF
Sbjct:  230 RINGFNSKIVEVSRAYSDLMEKVVQEH-LEAGEHKADFVNILLSIEKEKNNGFKVQRNDIKFMILDMFIGGISTSSTLLEWIMTELIRNPECMKKLQNEIRSTI---RPHGSYIKEKEVENMRYLKAVIKEVFRVHPPLPLILPRLLTEDVKVKGYDIAAGTEVLINAWSIHRDPAIWGPDAEEFKPERHLDSTLDYHGQDLKYIPF 432          

HSP 2 Score: 28.4906 bits (62), Expect = 7.987e-31
Identity = 10/24 (41.67%), Postives = 19/24 (79.17%), Query Frame = 3
Query:  612 AGRRICPGLPLAIRMLHLMVGSLI 683
            +GRRICPG+ LA+ ++ + + +L+
Sbjct:  434 SGRRICPGINLAMGLVEVTLANLV 457          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.197e-31
Identity = 66/174 (37.93%), Postives = 98/174 (56.32%), Query Frame = 1
Query:  103 STECKDILDTLLNII----QDKSVEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKP-IEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQILS*IPF 609
            S + KDI+D +L+++    +D S+ +   H+K    ++ IAG DT + TM W M EL  NP             +G  +  I + D+ ++P+L  V+KET RLHP  PLLLPR+    V + G+ +P   ++ VN WAIGRD   W +P  F PERF+ S  D++GQ    +PF
Sbjct:  264 SKDHKDIVDVMLDVMHKQGKDDSLRLTIDHIKGLLTNIIIAGIDTGALTMIWTMTELARNPEIMKKVQGEIRDRLGNNRERITKEDLDKVPFLNLVIKETFRLHPVAPLLLPRETMAHVKVQGYDIPPKRRILVNAWAIGRDPKLWTDPEEFKPERFIDSPVDYRGQHFELLPF 437          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.040e-30
Identity = 63/169 (37.28%), Postives = 96/169 (56.80%), Query Frame = 1
Query:  115 KDILDTLLNIIQDKSV----EIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQILS*IPF 609
            +D +D LL + ++++V    ++   H+K    ++ I G  T++ TM WAM EL+ NP             +GK   I   DI +L YL+ V+ ET RLHP  P L+PR+   +  +  + +P   +++VNVWAIGRD  TW +P  F+PERF+ S+ D KGQ    +PF
Sbjct:  265 EDFVDLLLRLEKEETVIGYGKLTRNHIKAILMNVLIGGIGTSAITMTWAMTELMRNPRVMKKVQSEIRNQIGKKSMITLDDIDQLHYLKMVINETWRLHPPSPFLIPRQVMSEFELNDYVIPVKTRLYVNVWAIGRDPDTWKDPEEFLPERFVNSSIDAKGQHFELLPF 433          

HSP 2 Score: 24.2534 bits (51), Expect = 1.040e-30
Identity = 9/31 (29.03%), Postives = 18/31 (58.06%), Query Frame = 3
Query:  591 FELNSLRAGRRICPGLPLAIRMLHLMVGSLI 683
            FEL    +GRR+CP + +   M+   + +++
Sbjct:  428 FELLPFGSGRRMCPAMYMGTTMVEFGLANML 458          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.201e-30
Identity = 69/189 (36.51%), Postives = 104/189 (55.03%), Query Frame = 1
Query:   46 FDRLVDQRLKHRQEHGCSISTECKDILDTLLNIIQDKSVEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVG-KCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQILS*IPF 609
            +  ++D  LK        I T   D++D   +     S ++   +LK    D+F+AG DT++ TM WAM EL+ NP            T+G K + I E D+ ++ YL  ++KET RLHPA+P ++PR+    + I G+ +P   Q+ +NVW IGRD   W++P  F PERF  S+ DF+GQ    +PF
Sbjct:  252 YQHVIDDHLKPEGRKNQDIVTLILDMIDKQED---SDSFKLNMDNLKAIVMDVFLAGIDTSAVTMIWAMTELIRNPRVMKKAQESIRTTLGLKKERITEEDLGKVEYLNHILKETFRLHPALPFVVPRETMSHIKIQGYDIPPKTQIQLNVWTIGRDPKRWNDPEEFNPERFANSSVDFRGQHFDLLPF 437          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.569e-30
Identity = 66/195 (33.85%), Postives = 111/195 (56.92%), Query Frame = 1
Query:   31 KMLEVFDRLVDQRL-KHRQEHGCSISTEC-KDILDTLLNIIQDKSVEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQILS*IPF 609
            K+  V DR++   + +H+  +  S   E  +D++D LL   ++    +   ++K    D+FI G +T+SS +EW M+EL+ NP           +       ++E+++ +L YL++++KET+RLHP VPLL+PR + +   I G+ +P   ++ +N WAIGR+   W    +F PERFL S+ DF+G     IPF
Sbjct:  250 KVHRVTDRVLQDIIDEHKNRNRSSEEREAVEDLVDVLLKFQKESEFRLTDDNIKAVIQDIFIGGGETSSSVVEWGMSELIRNPRVMEEAQAEVRRVYDSKGYVDETELHQLIYLKSIIKETMRLHPPVPLLVPRVSRERCQINGYEIPSKTRIIINAWAIGRNPKYWGETESFKPERFLNSSIDFRGTDFEFIPF 444          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.763e-30
Identity = 64/185 (34.59%), Postives = 96/185 (51.89%), Query Frame = 1
Query:    4 KRRITVYSAKMLEVFDRLVDQRLKHRQEHGCSISTECKDILDTLLNIIQDKSVEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERF 558
            ++ +      M ++  RL+D+         C    E   +++ L+++ Q +        +K     + +AG +T++ T+EWAMA LL NP           + +GK + I+ESDI  LPYLQ VV ET RL P  P L+PR  T D+ I G+ VP+   V VN WAI RD   W+ P  F P+R+
Sbjct:  240 EKEVKAIGKSMDDILQRLLDE---------CRRDKEGNTMVNHLISLQQQQPEYYTDVIIKGLMMSMMLAGTETSAVTLEWAMANLLRNPEVLEKARSEIDEKIGKDRLIDESDIAVLPYLQNVVSETFRLFPVAPFLIPRSPTDDMKIGGYDVPRDTIVMVNAWAIHRDPEIWEEPEKFNPDRY 415          

HSP 2 Score: 28.8758 bits (63), Expect = 1.763e-30
Identity = 14/31 (45.16%), Postives = 19/31 (61.29%), Query Frame = 3
Query:  591 FELNSLRAGRRICPGLPLAIRMLHLMVGSLI 683
            ++L     GRR CPG  L  R++ L +GSLI
Sbjct:  426 YKLMPFGNGRRTCPGAGLGQRIVTLALGSLI 456          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 3.495e-30
Identity = 65/169 (38.46%), Postives = 97/169 (57.40%), Query Frame = 1
Query:  115 KDILDTLLNIIQDKSV----EIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQILS*IPF 609
            +D +D LL + ++++V    ++   H+K    ++ + G  T++ TM WAM EL+ NP             +G    I   DI +L YL+ V+ ET RLHP  PLL+PR+   +  I G+T+P   +++VNVW IGRD  TW +P  F+PERF+ SN D KGQ    +PF
Sbjct:  265 EDFVDLLLKLEKEETVLGYGKLTRNHIKAVLMNVLLGGIGTSAITMTWAMTELMRNPRVMKKVQSEIRNQIGGKSMICLDDIDQLHYLKMVINETWRLHPPAPLLVPREVMSEFEINGYTIPAKTRLYVNVWGIGRDPDTWKDPEEFLPERFVNSNIDAKGQNFELLPF 433          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.495e-30
Identity = 74/197 (37.56%), Postives = 106/197 (53.81%), Query Frame = 1
Query:   31 KMLEVFDRLVDQRLKHRQEHGCSISTECKDILDTLLNI----IQDKSVEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQILS*IPF 609
            K+ +  D   DQ +KH  E   SI     DI+D LL +    I+    ++   + K    ++  AG DT++  M W M  L+ NP           + +     I E DI RL YL+ VVKET R+ P VPLL+PR+A+KDV I G+ +PK   + VN+WAI R+ + W +P  FIPERF+ +  D+KG     +PF
Sbjct:  237 KIFKAMDAFFDQSIKHHLEDE-SIKD---DIIDLLLKMERGEIELGEFQLTRDNTKGILFNILNAGIDTSAQVMTWVMTYLISNPRVMKKAQAEVREVIKNKDDIIEEDIERLEYLKMVVKETFRVLPLVPLLIPREASKDVKIGGYDIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFMDNQIDYKGLNFEFLPF 429          
The following BLAST results are available for this feature:
BLAST of CX294560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 478
Match NameE-valueIdentityDescription
C75A5_EUSGR5.392e-3139.18Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C81D1_ARATH6.133e-3142.18Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CY... [more]
C71AI_ARATH7.987e-3134.78Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C71BH_ARATH9.197e-3137.93Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C71BX_ARATH1.040e-3037.28Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]
C71B2_ARATH1.201e-3036.51Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C71DA_SOYBN1.569e-3033.85Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C81F1_ARATH1.763e-3034.59Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
C71BY_ARATH3.495e-3038.46Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]
C71BB_ARATH3.495e-3037.56Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05054C02SK FlavRip1 Citrus clementina cDNA clone C05054C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294560 ID=CX294560; Name=CX294560; organism=Citrus clementina; type=EST; length=684bp
ATAAAGCGCCGCATCACAGTTTATAGTGCCAAGATGCTCGAGGTGTTTGA
TCGCTTGGTTGATCAACGATTGAAGCATAGACAAGAACATGGTTGCAGTA
TTAGCACCGAATGTAAAGATATATTAGATACTCTTCTCAATATTATCCAA
GACAAGAGTGTTGAGATTGAAACAAAACATCTCAAGCACTTTTTTGCGGA
TTTGTTTATTGCGGGGAATGACACAACTTCAAGTACAATGGAATGGGCAA
TGGCAGAACTACTCCACAACCCTGAGGCTTTATTGAAAGCAAAATTGGAG
CTAGAACAAACAGTTGGCAAGTGTAAACCAATTGAGGAATCTGACATCAC
TCGGCTACCTTATCTACAAGCTGTTGTTAAAGAAACTTTGAGATTGCACC
CTGCAGTTCCCTTATTACTTCCCCGCAAAGCCACAAAAGATGTTGCAATT
GCAGGCTTCACAGTGCCAAAAGGTGCACAAGTTTTTGTCAATGTATGGGC
TATTGGCAGAGATGAAAGCACATGGGACAACCCACACACTTTTATTCCCG
AAAGGTTCTTAGGGTCAAATGCTGATTTCAAAGGCCAGATTTTGAGCTAA
ATTCCCTTCGAGCTGGACGACGAATTTGTCCTGGTTTACCATTGGCAATC
AGAATGTTACATCTAATGGTGGGTTCACTTATTA
back to top