CX294560

Overview
NameCX294560
Unique NameCX294560
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C75AK_ARATH (Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=CYP705A20 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 2.469e-29
Identity = 67/188 (35.64%), Postives = 106/188 (56.38%), Query Frame = 1
Query:    4 KRRITVYSAKMLEVFDRLVDQRLKHRQEHGCSISTECKDILDTLLNIIQDKSVE--IETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL 561
            K+ I   S    E+ +R++ +R K   EH  +       ++D LL   +D+  E  I   H+K  F +L + G DT++ T++W MAEL++N              VG+ + I+E D+ +LPYLQ+VVKE LRLHP +PL++ R   +   + GF + +   + VN +A+ RD +TW++P  F PERFL
Sbjct:  243 KKEIMYVSNSFDELLERIIVEREKKPNEHQGTY------LMDVLLEAYEDEKAEHKITRNHIKSLFVELLLGGTDTSAQTIQWTMAELINNRNVLKRLREEIDSVVGETRLIQEKDLPKLPYLQSVVKEGLRLHPPLPLMV-RTFQRSCEMKGFYIAEKTTLVVNAYAVMRDPTTWEDPDEFKPERFL 423          

HSP 2 Score: 23.483 bits (49), Expect = 2.469e-29
Identity = 13/41 (31.71%), Postives = 22/41 (53.66%), Query Frame = 3
Query:  576 FQRPDFELNSLR-----AGRRICPGLPLAIRMLHLMVGSLI 683
            F R + E  +L+     +GRR CPG  LA   +   +G+++
Sbjct:  422 FLRQEEERRALKHIAFGSGRRGCPGSNLATIFIGTAIGTMV 462          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.959e-29
Identity = 68/203 (33.50%), Postives = 112/203 (55.17%), Query Frame = 1
Query:    1 IKRRITVYSAKMLEVFDRLVDQRLKHRQEHGCSISTECKDILDTLLNIIQDKSVEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQILS*IPF 609
            +KR++      ++++++  V  R  +R       + E KD+LD L+      + +     +   F + F  G+DT S+ +EWA+A+L+ NP           + VG+   ++ES  + LPYLQA VKET+RL+P + +++P +  +   + G+T+PKG  V VN  AIGRD   W +P  F PERFL S+ ++ G+    IPF
Sbjct:  233 LKRKMDEQFKLLIKIWEGEVLARRANR-------NPEPKDMLDVLI------ANDFNEHQINAMFMETFGPGSDTNSNIIEWALAQLIKNPDKLAKLREELDRVVGRSSTVKESHFSELPYLQACVKETMRLYPPISIMIPHRCMETCQVMGYTIPKGMDVHVNAHAIGRDPKDWKDPLKFQPERFLDSDIEYNGKQFQFIPF 422          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.959e-29
Identity = 78/210 (37.14%), Postives = 113/210 (53.81%), Query Frame = 1
Query:   13 ITVYSAKMLEVFDR----LVDQRLKH-----RQEHGCSISTECKDILDTLLNIIQDKSVEIET--KHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQILS*IPF 609
            +T   AK+  V  R    L D   KH     R + G     E +D++D LL + +  S+E+    +++K    ++F AG DT++ST+EWAM+E++ NP           Q     + I E+D+  L YL++V+KETLRLHP   L+ PR+      I G+ +P   +V +N WAIGRD   W +   FIPERF  S+ DFKG     IPF
Sbjct:  229 LTRQKAKVEHVHQRADKILEDILRKHMEKRTRVKEGNGSEAEQEDLVDVLLRLKESGSLEVPMTMENIKAVIWNIFAAGTDTSASTLEWAMSEMMKNPKVKEKAQAELRQIFKGKEIIRETDLEELSYLKSVIKETLRLHPPSQLI-PRECIISTNIDGYEIPIKTKVMINTWAIGRDPQYWSDADRFIPERFNDSSIDFKGNSFEYIPF 437          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.213e-29
Identity = 70/192 (36.46%), Postives = 108/192 (56.25%), Query Frame = 1
Query:   49 DRLVDQRL-KHRQEHGCSISTECKDILDTLLNIIQDKSVEIETKHL--KHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL--GSNADFKGQILS*IPF 609
            D ++ + L +HRQ+    +    +D++  LL++++ K++E     +  K F   +  AG + + +T+ WA + +L+NP             VGK + I ESD+++L YLQAVVKETLRL+P  PL  PR+  +D  I G+TV KG ++  N+  I  D + W NP  F PERFL    + D KGQ    +PF
Sbjct:  263 DEIIGEWLDEHRQKR--KMGENVQDLMSVLLSLLEGKTIEGMNVDIVIKSFVLTVIQAGTEASITTLIWATSLILNNPSVLEKLKAELDIQVGKERYICESDLSKLTYLQAVVKETLRLYPPAPLSRPREFEEDCTIGGYTVKKGTRLITNLSKIHTDHNVWSNPLEFKPERFLTTDKDIDMKGQHFQLLPF 452          

HSP 2 Score: 29.6462 bits (65), Expect = 3.213e-29
Identity = 12/31 (38.71%), Postives = 19/31 (61.29%), Query Frame = 3
Query:  591 FELNSLRAGRRICPGLPLAIRMLHLMVGSLI 683
            F+L     GRRICPG+ L ++ + L + S +
Sbjct:  447 FQLLPFGGGRRICPGINLGLQTVRLTLASFL 477          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.047e-29
Identity = 76/207 (36.71%), Postives = 109/207 (52.66%), Query Frame = 1
Query:   10 RITVYSAKMLEVF---DRLVDQRLKHRQEHGCSISTECKDILDTLLNIIQDKS----VEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQILS*IPF 609
            RIT   AK  +VF   D   DQ +   Q H    S +  DI+D LL + + +      E+  +H K    ++  AG DT++ TM WAM  LL NP           + +     I + D+ +L Y + V+KET R+ P VP+L+PR A KD+ IAG+ VP+   + VN+WA+    S W +P TF PERF+ +  DFKG     +PF
Sbjct:  227 RITGLHAKCEKVFHGIDSFFDQAI---QRHIDDPSIK-DDIIDLLLKMERGEGSLGEYELTREHTKGILMNILTAGIDTSAQTMTWAMTHLLANPRVMKKLQAEIREKIKNIDEITDDDVEQLDYFKLVLKETFRISPIVPVLVPRVAAKDLKIAGYDVPEKTWIHVNMWAVHMSPSIWKDPETFNPERFIDNQTDFKGLNFELLPF 429          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.591e-29
Identity = 67/195 (34.36%), Postives = 106/195 (54.36%), Query Frame = 1
Query:   46 FDRLVDQRLKHRQEHGCSISTECKDILDTLLNIIQDKSV----EIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGK---CKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQILS*IPF 609
            +++++D  L+  +E          D +D LL + ++++V    ++   H+K    ++ + G +T++ TM WAMAEL+ NP             +GK    + I   +I  L YL  V+KET RLHP  PLL+PR+   +  I G+T+    ++ VNVWAIGRD   W +P  F+PERF+  + D KGQ    +PF
Sbjct:  248 YEQMIDLHLQKNREESED------DFVDLLLRLEKEEAVLGYGKLTRNHIKAILMNILLGGINTSAITMTWAMAELIRNPRVMKKVQSEIRAQIGKNNKTRIISLDEINHLSYLNMVIKETCRLHPVAPLLVPREVISEFKINGYTIQPKTRLHVNVWAIGRDPEIWKDPEEFLPERFMDCDIDVKGQDYELLPF 436          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 8.608e-29
Identity = 73/200 (36.50%), Postives = 110/200 (55.00%), Query Frame = 1
Query:   25 SAKMLEVF-DRLVDQRLKHRQEHGCSISTECKDILDTLLNIIQDKSV----EIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQILS*IPF 609
            S K L+VF  ++ D    H+QE+   +    +D +D LL + ++++V    ++   H+K    ++ +   +T++ TM WAMAEL+ NP             +     I   DI  LPYL+ V+KET RLHP VPLLLPR+   +  I G+ +     ++VNVWAIGRD  +W +   F PERF+ +N D KGQ    +PF
Sbjct:  241 SVKDLDVFYQQMFDL---HKQENKQGV----EDFVDLLLKLEKEETVLGYGKLTRNHVKAILMNVLLGAINTSAMTMTWAMAELIRNPRVMKKVQSEIRNQMINKSVITLDDIDHLPYLKMVIKETWRLHPPVPLLLPREVMSEFEINGYKIQPKTLLYVNVWAIGRDPDSWKDADMFYPERFMDNNIDAKGQNFELLPF 433          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.608e-29
Identity = 65/167 (38.92%), Postives = 96/167 (57.49%), Query Frame = 1
Query:  118 DILDTLLNIIQDKSV--EIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTW-DNPHTFIPERFLGSNADFKGQILS*IPF 609
            D +D LL I ++KS+  EI+   +K    D+ +AG D++ + M+WAM ELL +P                   + E DI  + YL+AV+KET RLHP +PLL P ++ +DV +  + +P G QV +N WAIGR+ +TW  +   F PER L S+ DF+G     +PF
Sbjct:  259 DFVDVLLRIQREKSIGFEIDRLCIKAIVLDVLVAGTDSSYALMDWAMTELLRHPECLRTLQEEVRTICKGNLSVSEEDIQNMSYLKAVIKETTRLHPPLPLLAPHESIQDVILGDYHIPAGTQVMINAWAIGREAATWGPDAEKFRPERHLDSSVDFRGHNFELVPF 425          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.237e-29
Identity = 67/189 (35.45%), Postives = 101/189 (53.44%), Query Frame = 1
Query:   55 LVDQRLKHRQEHGCSISTECKDILDTLLNIIQDK----SVEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQILS*IPF 609
            +VD R K + E       + +D++D LL +   +    S  I   H++    DLF+AG DT+  T++W MAEL  +P           + VG    +   D+  L Y++ V+KET RLH   P+L+PR+A  +  I G+ +  G ++ VN WAIGR+   W +P  FIPERF+ SN + KG     +PF
Sbjct:  258 IVDHREKKKTE-------DREDLIDVLLKLQSQETKLGSSRITDTHIRAIIMDLFVAGVDTSVITLDWTMAELSRHPRVMKKVQAEIREHVGDKGIVTYDDLEALVYMKMVIKETWRLHAPSPILIPREAMTNFKIKGYDIYPGTRIHVNAWAIGRNPDVWKDPDEFIPERFVDSNVETKGTSFELLPF 439          

HSP 2 Score: 21.9422 bits (45), Expect = 9.237e-29
Identity = 9/31 (29.03%), Postives = 17/31 (54.84%), Query Frame = 3
Query:  591 FELNSLRAGRRICPGLPLAIRMLHLMVGSLI 683
            FEL    +GRR CP + + +  +   + +L+
Sbjct:  434 FELLPFGSGRRGCPAMYVGLSTVEYTLANLL 464          
BLAST of CX294560 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.124e-28
Identity = 69/202 (34.16%), Postives = 110/202 (54.46%), Query Frame = 1
Query:   49 DRLVDQRLKHRQEHGCSISTEC--KDILDTLLNIIQDK------------SVEIETKHLKHFFADLFIAGNDTTSSTMEWAMAELLHNPXXXXXXXXXXXQTVGKCKPIEESDITRLPYLQAVVKETLRLHPAVPLLLPRKATKDVAIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNA-DFKGQILS*IPF 609
            D ++D+ +K ++        +    D++D LL    ++            S+++   ++K    D+   G +T +S +EWA+ ELL +P           + VG  + +EESDI +L YL+  +KETLR+HP +PLLL  +  +D +I GF +PK ++V +N +AIGRD ++W +P TF P RFL     DFKG     IPF
Sbjct:  251 DDIIDEHMKKKENQNAVDDGDVVDTDMVDDLLAFYSEEAKLVSETADLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWALTELLRSPEDLKRVQQELAEVVGLDRRVEESDIEKLTYLKCTLKETLRMHPPIPLLL-HETAEDTSIDGFFIPKKSRVMINAFAIGRDPTSWTDPDTFRPSRFLEPGVPDFKGSNFEFIPF 451          
The following BLAST results are available for this feature:
BLAST of CX294560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 478
Match NameE-valueIdentityDescription
C75AK_ARATH2.469e-2935.64Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=... [more]
C80A1_BERST2.959e-2933.50Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C71D8_SOYBN2.959e-2937.14Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C82A2_SOYBN3.213e-2936.46Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C71B1_THLAR5.047e-2936.71Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C71BA_ARATH6.591e-2934.36Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C71B9_ARATH8.608e-2936.50Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
C71AL_ARATH8.608e-2938.92Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
C71B6_ARATH9.237e-2935.45Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C84A1_ARATH1.124e-2834.16Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC05054C02SK FlavRip1 Citrus clementina cDNA clone C05054C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294560 ID=CX294560; Name=CX294560; organism=Citrus clementina; type=EST; length=684bp
ATAAAGCGCCGCATCACAGTTTATAGTGCCAAGATGCTCGAGGTGTTTGA
TCGCTTGGTTGATCAACGATTGAAGCATAGACAAGAACATGGTTGCAGTA
TTAGCACCGAATGTAAAGATATATTAGATACTCTTCTCAATATTATCCAA
GACAAGAGTGTTGAGATTGAAACAAAACATCTCAAGCACTTTTTTGCGGA
TTTGTTTATTGCGGGGAATGACACAACTTCAAGTACAATGGAATGGGCAA
TGGCAGAACTACTCCACAACCCTGAGGCTTTATTGAAAGCAAAATTGGAG
CTAGAACAAACAGTTGGCAAGTGTAAACCAATTGAGGAATCTGACATCAC
TCGGCTACCTTATCTACAAGCTGTTGTTAAAGAAACTTTGAGATTGCACC
CTGCAGTTCCCTTATTACTTCCCCGCAAAGCCACAAAAGATGTTGCAATT
GCAGGCTTCACAGTGCCAAAAGGTGCACAAGTTTTTGTCAATGTATGGGC
TATTGGCAGAGATGAAAGCACATGGGACAACCCACACACTTTTATTCCCG
AAAGGTTCTTAGGGTCAAATGCTGATTTCAAAGGCCAGATTTTGAGCTAA
ATTCCCTTCGAGCTGGACGACGAATTTGTCCTGGTTTACCATTGGCAATC
AGAATGTTACATCTAATGGTGGGTTCACTTATTA
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