CX294566

Overview
NameCX294566
Unique NameCX294566
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length652
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294566 vs. ExPASy Swiss-Prot
Match: ARFD_DICDI (ADP-ribosylation factor D OS=Dictyostelium discoideum GN=arrD PE=3 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 4.755e-50
Identity = 88/175 (50.29%), Postives = 130/175 (74.29%), Query Frame = 1
Query:   82 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLST 606
            MG++ +  FS +F  K +++LM+GLD +GKTTILYKL L E+V+TI T+G+NVET+++K+++ T+WD+ G+++IR LW+ ++     +IFVVDS+DR RI EA  EL +++ E+EL+   LL+FA KQD  + M   E+TD+LGLH ++ R WY+Q T    G G+YEGLDWLST
Sbjct:    1 MGISSSNPFSSIFKSKAIKLLMLGLDGSGKTTILYKLMLNEVVSTISTLGYNVETIQHKHLNLTLWDLAGEERIRTLWKPFYNKCTAIIFVVDSSDRLRIDEAASELAKLMKEEELKGCSLLIFATKQDCISPMEIPELTDQLGLHDIKDRRWYVQPTRTLEGIGIYEGLDWLST 175          
BLAST of CX294566 vs. ExPASy Swiss-Prot
Match: ARFF_DICDI (ADP-ribosylation factor F OS=Dictyostelium discoideum GN=arrF PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.082e-49
Identity = 90/175 (51.43%), Postives = 124/175 (70.86%), Query Frame = 1
Query:   94 FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRML--NEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSTTS 612
            F  +FS    K+ +RILM+GLD AGK+T+LYKLK G+++ TIPTIGFNVE +EYKN+S  VWD+GGQ+ IR LWR Y Q T   IFVVDS DR+R  E + E+  ++  N++E  +A LL+FANKQD+ N +  AE+ + L L+SL  + W++Q   A  G+G+YEG DW+ + S
Sbjct:   13 FVNIFSLFEGKRNIRILMIGLDGAGKSTLLYKLKFGDVIRTIPTIGFNVEIIEYKNLSMNVWDIGGQNNIRALWRQYDQRTDVFIFVVDSTDRERFDEVKQEIKNIIEQNKNESSNASLLIFANKQDMLNPITPAELVNSLDLNSLTNKKWHVQPCSAVRGDGIYEGFDWIVSNS 187          
BLAST of CX294566 vs. ExPASy Swiss-Prot
Match: ARL5B_MOUSE (ADP-ribosylation factor-like protein 5B OS=Mus musculus GN=Arl5b PE=2 SV=3)

HSP 1 Score: 187.963 bits (476), Expect = 3.768e-47
Identity = 89/175 (50.86%), Postives = 126/175 (72.00%), Query Frame = 1
Query:   82 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLST 606
            MGL F KL+S LF  +E ++++VGLD AGKTTILY+  + E+V T PTIG NVE +  KN  F +WD+GGQ+ +R  W  Y+ NT+ +I VVDS DR+R+   ++EL+RML  ++LR A +L+FANKQD+   M AAEI+  L L S++   W+IQS CA +GEGL +GL+W+++
Sbjct:    1 MGLIFAKLWS-LFCNQEHKVIIVGLDNAGKTTILYQFLMNEVVHTSPTIGSNVEEIVVKNTHFLMWDIGGQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMKGCMTAAEISKYLTLSSIKDHPWHIQSCCALTGEGLCQGLEWMTS 174          
BLAST of CX294566 vs. ExPASy Swiss-Prot
Match: ARL5B_HUMAN (ADP-ribosylation factor-like protein 5B OS=Homo sapiens GN=ARL5B PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.768e-47
Identity = 89/175 (50.86%), Postives = 126/175 (72.00%), Query Frame = 1
Query:   82 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLST 606
            MGL F KL+S LF  +E ++++VGLD AGKTTILY+  + E+V T PTIG NVE +  KN  F +WD+GGQ+ +R  W  Y+ NT+ +I VVDS DR+R+   ++EL+RML  ++LR A +L+FANKQD+   M AAEI+  L L S++   W+IQS CA +GEGL +GL+W+++
Sbjct:    1 MGLIFAKLWS-LFCNQEHKVIIVGLDNAGKTTILYQFLMNEVVHTSPTIGSNVEEIVVKNTHFLMWDIGGQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMKGCMTAAEISKYLTLSSIKDHPWHIQSCCALTGEGLCQGLEWMTS 174          
BLAST of CX294566 vs. ExPASy Swiss-Prot
Match: ARL5A_MOUSE (ADP-ribosylation factor-like protein 5A OS=Mus musculus GN=Arl5a PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.442e-46
Identity = 87/173 (50.29%), Postives = 124/173 (71.68%), Query Frame = 1
Query:   82 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 600
            MG+ FT+++ RLF  +E ++++VGLD AGKTTILY+  + E+V T PTIG NVE +   N  F +WD+GGQ+ +RP W  Y+ NT+ +I VVDS DR+RI   R+EL++ML  ++LR A LL+FANKQD+   M  AEI+  L L S++   W+IQ+ CA +GEGL +GL+W+
Sbjct:    1 MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVVNNTRFLMWDIGGQESLRPSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWM 172          
BLAST of CX294566 vs. ExPASy Swiss-Prot
Match: ARL5A_RAT (ADP-ribosylation factor-like protein 5A OS=Rattus norvegicus GN=Arl5a PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.067e-45
Identity = 86/173 (49.71%), Postives = 123/173 (71.10%), Query Frame = 1
Query:   82 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 600
            MG+ FT+++ RLF  +E ++++VGLD AGKTTILY+  + E+V T PTIG NVE +   N  F +WD+GGQ+ +R  W  Y+ NT+ +I VVDS DR+RI   R+EL++ML  ++LR A LL+FANKQD+   M  AEI+  L L S++   W+IQ+ CA +GEGL +GL+W+
Sbjct:    1 MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVVNNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWM 172          
BLAST of CX294566 vs. ExPASy Swiss-Prot
Match: ARL5A_HUMAN (ADP-ribosylation factor-like protein 5A OS=Homo sapiens GN=ARL5A PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.067e-45
Identity = 86/173 (49.71%), Postives = 123/173 (71.10%), Query Frame = 1
Query:   82 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 600
            MG+ FT+++ RLF  +E ++++VGLD AGKTTILY+  + E+V T PTIG NVE +   N  F +WD+GGQ+ +R  W  Y+ NT+ +I VVDS DR+RI   R+EL++ML  ++LR A LL+FANKQD+   M  AEI+  L L S++   W+IQ+ CA +GEGL +GL+W+
Sbjct:    1 MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWM 172          
BLAST of CX294566 vs. ExPASy Swiss-Prot
Match: ARL5A_BOVIN (ADP-ribosylation factor-like protein 5A OS=Bos taurus GN=ARL5A PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.067e-45
Identity = 86/173 (49.71%), Postives = 123/173 (71.10%), Query Frame = 1
Query:   82 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 600
            MG+ FT+++ RLF  +E ++++VGLD AGKTTILY+  + E+V T PTIG NVE +   N  F +WD+GGQ+ +R  W  Y+ NT+ +I VVDS DR+RI   R+EL++ML  ++LR A LL+FANKQD+   M  AEI+  L L S++   W+IQ+ CA +GEGL +GL+W+
Sbjct:    1 MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKGCMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWM 172          
BLAST of CX294566 vs. ExPASy Swiss-Prot
Match: ARL5_DICDI (ADP-ribosylation factor-like protein 5 OS=Dictyostelium discoideum GN=arl5 PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.899e-44
Identity = 79/169 (46.75%), Postives = 120/169 (71.01%), Query Frame = 1
Query:   94 FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 600
            F  +++R F   E ++++VGL+AAGKTT LYKL L E+V+T PT+G N+E   Y+NI   +WD+GGQD +R  W  Y+ NTQ +I V+DS DR R+   ++EL +ML  + L+ +++L++ANKQDL +AM+  E++  L LHS++   ++IQ+ CA +G+GL  GLDWL
Sbjct:    8 FASIWNRFFNNAEYKVIIVGLNAAGKTTTLYKLLLDEVVSTTPTVGSNLEEFVYRNIRLLMWDLGGQDLLRSTWNQYYINTQAVILVIDSTDRARVNLIKEELFKMLAHENLKKSIILIYANKQDLKDAMSPTELSTLLSLHSIKDHDYHIQACCALTGQGLESGLDWL 176          
BLAST of CX294566 vs. ExPASy Swiss-Prot
Match: ARL5_CAEEL (ADP-ribosylation factor-like protein 5 OS=Caenorhabditis elegans GN=arl-5 PE=2 SV=3)

HSP 1 Score: 173.711 bits (439), Expect = 7.353e-43
Identity = 86/175 (49.14%), Postives = 115/175 (65.71%), Query Frame = 1
Query:   82 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR-QRHWYIQSTCATSGEGLYEGLDWLS 603
            MGL   KLF   +  K+ +I++VGLD AGKTTILY     + V T PTIG NVE V Y+N+ F +WD+GGQ+ +R  W  Y+  T  +I V+DS+D  RI   +++LH ML  ++L  A +LV ANKQDLP AMN AE++ +LGL +LR  R W I   CA  GEGL E L+W++
Sbjct:    1 MGLIMAKLFQSWWIGKKYKIIVVGLDNAGKTTILYNYVTKDQVETKPTIGSNVEEVSYRNLDFVIWDIGGQESLRKSWSTYYVQTDVVIVVIDSSDTTRIPIMKEQLHNMLQHEDLARAHILVLANKQDLPGAMNPAEVSTQLGLQTLRGARKWQINGCCAVKGEGLPEALEWIA 175          
The following BLAST results are available for this feature:
BLAST of CX294566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
ARFD_DICDI4.755e-5050.29ADP-ribosylation factor D OS=Dictyostelium discoid... [more]
ARFF_DICDI3.082e-4951.43ADP-ribosylation factor F OS=Dictyostelium discoid... [more]
ARL5B_MOUSE3.768e-4750.86ADP-ribosylation factor-like protein 5B OS=Mus mus... [more]
ARL5B_HUMAN3.768e-4750.86ADP-ribosylation factor-like protein 5B OS=Homo sa... [more]
ARL5A_MOUSE2.442e-4650.29ADP-ribosylation factor-like protein 5A OS=Mus mus... [more]
ARL5A_RAT2.067e-4549.71ADP-ribosylation factor-like protein 5A OS=Rattus ... [more]
ARL5A_HUMAN2.067e-4549.71ADP-ribosylation factor-like protein 5A OS=Homo sa... [more]
ARL5A_BOVIN2.067e-4549.71ADP-ribosylation factor-like protein 5A OS=Bos tau... [more]
ARL5_DICDI3.899e-4446.75ADP-ribosylation factor-like protein 5 OS=Dictyost... [more]
ARL5_CAEEL7.353e-4349.14ADP-ribosylation factor-like protein 5 OS=Caenorha... [more]

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Properties
Property NameValue
Genbank descriptionC05054D02SK FlavRip1 Citrus clementina cDNA clone C05054D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294566 ID=CX294566; Name=CX294566; organism=Citrus clementina; type=EST; length=652bp
AATAAGCTTCGTCCTCCACACCCCCCCCCCCTCCCCTCTCTCTCTCGCGT
TCTCTGAAGATAGTGATCCCCAGCTGGAAGAATGGGGCTGACTTTCACAA
AGCTGTTCAGCCGGCTCTTTGCCAAGAAAGAGATGCGAATTCTAATGGTT
GGTCTTGATGCTGCTGGTAAGACCACTATCTTGTACAAGCTCAAGCTTGG
AGAGATTGTCACCACAATTCCTACCATTGGGTTTAATGTGGAGACCGTTG
AATATAAAAACATCAGTTTCACTGTGTGGGATGTTGGTGGCCAGGACAAG
ATTCGTCCCTTGTGGAGGCATTATTTCCAGAACACTCAAGGTCTCATTTT
TGTTGTGGACAGCAATGACAGAGACCGTATTGTAGAAGCAAGGGATGAAT
TGCATAGGATGTTGAATGAGGATGAGCTGCGAGATGCAGTGTTGCTTGTA
TTTGCTAACAAACAGGATCTTCCAAATGCAATGAATGCTGCTGAGATTAC
TGATAAGCTTGGCCTCCACTCCCTCAGGCAGCGCCACTGGTACATCCAGA
GCACCTGTGCAACCTCTGGTGAGGGTCTTTATGAAGGTCTGGATTGGCTC
TCCACAACATCGCTAACAAGGGCCTGAGCTGTTAAGATCTTTTTGCGGAC
TG
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