CX294570
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB2B_DICDI (Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 9.654e-43 Identity = 87/178 (48.88%), Postives = 126/178 (70.79%), Query Frame = 2 Query: 92 DYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIY-RIVSKKALTAND 622 +++FK +++GDSAVGKS LL +F F+ +S TIGVEF ++++ I+ K +K QIWDTAGQE++R++T AYYRGAV AM+VYDIT+R SF+++ WL + R + ++ +L+GNK+DLE R V T +AKEFAEK GL F ETSA + NV+ AF +I ++ S L +N+ Sbjct: 22 EHLFKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWDTAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTDCRKFSSCDVTTVLIGNKADLEANRQVSTSEAKEFAEKNGLMFFETSAKTALNVDEAFEKSTEQILKKLESNPGLLSNE 199
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB8B_HUMAN (Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2) HSP 1 Score: 172.94 bits (437), Expect = 1.261e-42 Identity = 83/176 (47.16%), Postives = 120/176 (68.18%), Query Frame = 2 Query: 92 DYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAN 619 DY+FK++LIGDS VGK+ LL RF+ D F+ +TIG++F+ +T+ + K +K QIWDTAGQER+R +T+AYYRGA+G MLVYDIT +SFDN+ W+ + HA ++ M++GNK D+ R V E ++ A G+ F+ETSA S NVE AF T+ +I +++K +N Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDSN 181
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB43_MOUSE (Ras-related protein Rab-43 OS=Mus musculus GN=Rab43 PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.647e-42 Identity = 87/172 (50.58%), Postives = 121/172 (70.35%), Query Frame = 2 Query: 71 GNYNNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEK-EGLCFMETSALESTNVELAFLTVLTEI 583 G+ + D++FK+VL+GD++VGK+ ++ RF FS +TIGV+F KTL I K VK QIWDTAGQER+R +T +YYR A GA+L YDI+KR +F +V W+E++R +A NI+ +L+GNKSDL R VP +A+ AE + LC +ETSA +S+NVE AF V TE+ Sbjct: 7 GDQDEHYDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLADFREVPLAEAQSLAEHYDILCAIETSAKDSSNVEEAFTRVATEL 178
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB1B_DICDI (Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B PE=2 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 1.647e-42 Identity = 84/171 (49.12%), Postives = 124/171 (72.51%), Query Frame = 2 Query: 80 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRI 592 N + DY+FK++LIGDS VGKS LL RFA D ++ +TIGV+F+ +T+ + K +K QIWDTAGQER+R +TS+YYRGA G ++VYD+T SF+NV +W++E++ +A ++ +LVGNK DL + V T A+E+A+ G+ F+ETSA S NVE AF+ + +EI ++ Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVGNKCDLIEKKIVDTSTAREYADSVGIPFLETSAKSSANVEQAFMIMASEIKKL 172
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB8_DISOM (Ras-related protein Rab-8 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 4.791e-42 Identity = 82/171 (47.95%), Postives = 118/171 (69.01%), Query Frame = 2 Query: 92 DYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 604 DY+FK++LIGDS VGK+ LL RF+ D F+ +TIG++F+ +T+ + K +K QIWDTAGQER+R +T+AYYRGA+G M VYDIT +SFDN+ W+ + HA ++ M++GNK D+ R V E ++ A G+ F+ETSA S NVE AF+T+ +I ++KK Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNEKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFITLARDIMTKLNKK 176
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB8B_BOVIN (Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 6.258e-42 Identity = 82/176 (46.59%), Postives = 119/176 (67.61%), Query Frame = 2 Query: 92 DYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAN 619 DY+FK++LIGDS VGK+ LL RF+ D F+ +TIG++F+ +T+ + K +K QIWDTAGQER+R +T+AYYRGA+G MLVYDIT +SFDN+ W+ + HA ++ M++GNK D+ R V E ++ A G+ F+E SA S NVE AF T+ +I +++K +N Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLEASAKSSMNVEEAFFTLARDIMTKLNRKMNDSN 181
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB1D_DICDI (Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.067e-41 Identity = 86/164 (52.44%), Postives = 117/164 (71.34%), Query Frame = 2 Query: 92 DYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEI 583 D+ FKI+LIGDS VGKS LL RFA D ++ +TIGV+F+ KTL + K +K QIWDTAGQER+R +TS+YYRGA G +LVYD T + SF NV +W+ E+ +A +N+ +LVGNK+DL + V + AK FAE G+ F+ETSA +TNVE F+++ +I Sbjct: 8 DFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQWMGEIDRYACENVNKLLVGNKTDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDI 171
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB10_PONAB (Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.067e-41 Identity = 79/166 (47.59%), Postives = 119/166 (71.69%), Query Frame = 2 Query: 92 DYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYR 589 D +FK++LIGDS VGK+ +L RF+ D F+ +TIG++F+ KT+ + K +K QIWDTAGQER+ +T++YYRGA+G MLVYDIT +SF+N+++WL + HA++++ ML+GNK D++ R VP ++ A + G+ F ETSA + N+E AFLT+ +I R Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB10_MOUSE (Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.067e-41 Identity = 79/166 (47.59%), Postives = 119/166 (71.69%), Query Frame = 2 Query: 92 DYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYR 589 D +FK++LIGDS VGK+ +L RF+ D F+ +TIG++F+ KT+ + K +K QIWDTAGQER+ +T++YYRGA+G MLVYDIT +SF+N+++WL + HA++++ ML+GNK D++ R VP ++ A + G+ F ETSA + N+E AFLT+ +I R Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB10_HUMAN (Ras-related protein Rab-10 OS=Homo sapiens GN=RAB10 PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.067e-41 Identity = 79/166 (47.59%), Postives = 119/166 (71.69%), Query Frame = 2 Query: 92 DYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYR 589 D +FK++LIGDS VGK+ +L RF+ D F+ +TIG++F+ KT+ + K +K QIWDTAGQER+ +T++YYRGA+G MLVYDIT +SF+N+++WL + HA++++ ML+GNK D++ R VP ++ A + G+ F ETSA + N+E AFLT+ +I R Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172 The following BLAST results are available for this feature:
BLAST of CX294570 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294570 ID=CX294570; Name=CX294570; organism=Citrus clementina; type=EST; length=660bpback to top |