CX294570
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB25_MOUSE (Ras-related protein Rab-25 OS=Mus musculus GN=Rab25 PE=1 SV=2) HSP 1 Score: 225.328 bits (573), Expect = 2.141e-58 Identity = 116/184 (63.04%), Postives = 143/184 (77.72%), Query Frame = 2 Query: 53 MSNFQQGNYNNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 604 M N +YN +VFK+VLIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VPTE+A FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+ Sbjct: 1 MGNRTDEDYN----FVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQ 180
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: YPT31_YEAST (GTP-binding protein YPT31/YPT8 OS=Saccharomyces cerevisiae GN=YPT31 PE=1 SV=3) HSP 1 Score: 223.402 bits (568), Expect = 8.135e-58 Identity = 111/183 (60.66%), Postives = 140/183 (76.50%), Query Frame = 2 Query: 74 NYNNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 622 +Y D +FKIVLIGDS VGKS LL+RF ++EF++DSK+TIGVEF T+TL I K +KAQIWDTAGQERYRA+TSAYYRGAVGA++VYDI+K S++N WL ELR +AD N+ + L+GNKSDL LRAVPTE++K FA++ L F ETSAL S NV+ AF ++ IY+ VSK + D Sbjct: 5 DYGYDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGD 187
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: YPT32_YEAST (GTP-binding protein YPT32/YPT11 OS=Saccharomyces cerevisiae GN=YPT32 PE=1 SV=3) HSP 1 Score: 222.631 bits (566), Expect = 1.388e-57 Identity = 107/176 (60.80%), Postives = 139/176 (78.98%), Query Frame = 2 Query: 74 NYNNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSK 601 +Y DY+FKIVLIGDS VGKS LL+RF DEF+++SK+TIGVEF T+T+ + +K +KAQIWDTAGQERYRA+TSAYYRGAVGA++VYDI+K S++N WL ELR +AD N+ + L+GNKSDL LRAVPT++AK FA + + F ETSAL S NV+ AF ++ I+++VSK Sbjct: 5 DYGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSK 180
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RB11C_DICDI (Ras-related protein Rab-11C OS=Dictyostelium discoideum GN=rab11C PE=1 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.175e-56 Identity = 111/178 (62.36%), Postives = 141/178 (79.21%), Query Frame = 2 Query: 92 DYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIV-SKKALTAND 622 +Y+FKIV+IGDSAVGKS LL RF R+EF+ +KATIGV+F TK++ I +K + AQ WDTAGQER+RAVTS YYRGAVGAM+VYDIT + SF NV RWL ELR A+++I+IM+VGNKSDLE R VPT++A+ FAE + F+ETSAL STNV +F +LT+IY +V SKK + +D Sbjct: 8 EYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQCWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGNKSDLEMSREVPTKEAQAFAESNKISFLETSALNSTNVNQSFERLLTDIYHLVSSKKPMVVDD 185
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RB11B_DICDI (Ras-related protein Rab-11B OS=Dictyostelium discoideum GN=rab11B PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 6.461e-47 Identity = 91/165 (55.15%), Postives = 126/165 (76.36%), Query Frame = 2 Query: 92 DYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIY 586 DY+ KIV+IGDS VGKS LL+R+ ++EFS+ +TIGVEF TKTL I +K +K Q+WDTAGQE+Y ++T +YY+GA+GA++VY+I R SF+N+ +WL++ R +A ++ IMLVGNKSDL+ R V T + K+FAEK + F+ETSAL+S NVE AF + IY Sbjct: 9 DYLCKIVVIGDSGVGKSNLLSRYNKNEFSVGKLSTIGVEFSTKTLKIDNKLIKLQLWDTAGQEKYNSITESYYKGAIGALIVYNIADRNSFNNLEKWLKKFRENAHQDYGIMLVGNKSDLKEYREVSTLEGKQFAEKHYMQFIETSALDSNNVETAFNNLFNFIY 173
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB1B_MACFA (Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.455e-46 Identity = 91/181 (50.28%), Postives = 130/181 (71.82%), Query Frame = 2 Query: 80 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 622 N + DY+FK++LIGDS VGKS LL RFA D ++ +TIGV+F+ +T+ + K +K QIWDTAGQER+R +TS+YYRGA G ++VYD+T R+S+ NV +WL+E+ +A +N+ +LVGNKSDL T + V AKEFA+ G+ F+ETSA +TNVE AF+T+ EI + + A + + Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 182
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB1B_RAT (Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 7.143e-46 Identity = 91/181 (50.28%), Postives = 130/181 (71.82%), Query Frame = 2 Query: 80 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 622 N + DY+FK++LIGDS VGKS LL RFA D ++ +TIGV+F+ +T+ + K +K QIWDTAGQER+R VTS+YYRGA G ++VYD+T ++S+ NV +WL+E+ +A +N+ +LVGNKSDL T + V AKEFA+ G+ F+ETSA +TNVE AF+T+ EI + + A + + Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 182
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB1B_PONAB (Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 7.143e-46 Identity = 90/181 (49.72%), Postives = 130/181 (71.82%), Query Frame = 2 Query: 80 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 622 N + DY+FK++LIGDS VGKS LL RFA D ++ +TIGV+F+ +T+ + K +K QIWDTAGQER+R +TS+YYRGA G ++VYD+T ++S+ NV +WL+E+ +A +N+ +LVGNKSDL T + V AKEFA+ G+ F+ETSA +TNVE AF+T+ EI + + A + + Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 182
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB1B_HUMAN (Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 7.143e-46 Identity = 90/181 (49.72%), Postives = 130/181 (71.82%), Query Frame = 2 Query: 80 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 622 N + DY+FK++LIGDS VGKS LL RFA D ++ +TIGV+F+ +T+ + K +K QIWDTAGQER+R +TS+YYRGA G ++VYD+T ++S+ NV +WL+E+ +A +N+ +LVGNKSDL T + V AKEFA+ G+ F+ETSA +TNVE AF+T+ EI + + A + + Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 182
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB1B_BOVIN (Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 7.143e-46 Identity = 90/181 (49.72%), Postives = 130/181 (71.82%), Query Frame = 2 Query: 80 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 622 N + DY+FK++LIGDS VGKS LL RFA D ++ +TIGV+F+ +T+ + K +K QIWDTAGQER+R +TS+YYRGA G ++VYD+T ++S+ NV +WL+E+ +A +N+ +LVGNKSDL T + V AKEFA+ G+ F+ETSA +TNVE AF+T+ EI + + A + + Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 182 The following BLAST results are available for this feature:
BLAST of CX294570 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294570 ID=CX294570; Name=CX294570; organism=Citrus clementina; type=EST; length=660bpback to top |