CX294570
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB1B_MOUSE (Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 9.329e-46 Identity = 90/181 (49.72%), Postives = 130/181 (71.82%), Query Frame = 2 Query: 80 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 622 N + DY+FK++LIGDS VGKS LL RFA D ++ +TIGV+F+ +T+ + K +K QIWDTAGQER+R +TS+YYRGA G ++VYD+T ++S+ NV +WL+E+ +A +N+ +LVGNKSDL T + V AKEFA+ G+ F+ETSA +TNVE AF+T+ EI + + A + + Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 182
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB1A_LYMST (Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 9.329e-46 Identity = 89/168 (52.98%), Postives = 126/168 (75.00%), Query Frame = 2 Query: 80 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEI 583 N DY+FK++LIGDS VGKS LL RFA D ++ +TIGV+F+ +T+ + K +K QIWDTAGQER+R +TS+YYRGA G ++VYD+T ++SF+NV +WL+E+ +A +N+ +LVGNKSDL T + V AKE+A++ G+ F+ETSA +TNVE AF+T+ EI Sbjct: 5 NPDYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEI 172
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB1_DISOM (Ras-related protein ORAB-1 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.218e-45 Identity = 89/168 (52.98%), Postives = 125/168 (74.40%), Query Frame = 2 Query: 80 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEI 583 N + DY+FK++LIGDS VGKS LL RFA D ++ +TIGV+F+ +T+ + K +K QIWDTAGQER+R +TS+YYRGA G ++VYD+T ++SF+NV +WL+E+ +A +N+ +LVGNK DL T + V AKEFA+ G+ F+ETSA +TNVE AF+T+ EI Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: YPT1_YEAST (GTP-binding protein YPT1 OS=Saccharomyces cerevisiae GN=YPT1 PE=1 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 2.714e-45 Identity = 90/177 (50.85%), Postives = 131/177 (74.01%), Query Frame = 2 Query: 80 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL 610 N++ DY+FK++LIG+S VGKS LL RF+ D ++ D +TIGV+F+ KT+ + K VK QIWDTAGQER+R +TS+YYRG+ G ++VYD+T ++SF+ V WL+E+ +A ++ +LVGNK DL+ R V + AKEFA+ + F+ETSAL+STNVE AFLT+ +I +S++ L Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNL 178
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB2A_RABIT (Ras-related protein Rab-2A OS=Oryctolagus cuniculus GN=RAB2A PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.714e-45 Identity = 87/176 (49.43%), Postives = 121/176 (68.75%), Query Frame = 2 Query: 95 YVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 622 Y+FK ++IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R++T +YYRGA GA+LVYDIT+R +F+++ WLE+ R H++ N++IML+GNKSDLE+ R V E+ + FA + GL FMETSA ++NVE AF+ EIY + + N+ Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB2A_PONAB (Ras-related protein Rab-2A OS=Pongo abelii GN=RAB2A PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.714e-45 Identity = 87/176 (49.43%), Postives = 121/176 (68.75%), Query Frame = 2 Query: 95 YVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 622 Y+FK ++IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R++T +YYRGA GA+LVYDIT+R +F+++ WLE+ R H++ N++IML+GNKSDLE+ R V E+ + FA + GL FMETSA ++NVE AF+ EIY + + N+ Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB2A_MOUSE (Ras-related protein Rab-2A OS=Mus musculus GN=Rab2a PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.714e-45 Identity = 87/176 (49.43%), Postives = 121/176 (68.75%), Query Frame = 2 Query: 95 YVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 622 Y+FK ++IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R++T +YYRGA GA+LVYDIT+R +F+++ WLE+ R H++ N++IML+GNKSDLE+ R V E+ + FA + GL FMETSA ++NVE AF+ EIY + + N+ Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB2A_MACFA (Ras-related protein Rab-2A OS=Macaca fascicularis GN=RAB2A PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.714e-45 Identity = 87/176 (49.43%), Postives = 121/176 (68.75%), Query Frame = 2 Query: 95 YVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 622 Y+FK ++IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R++T +YYRGA GA+LVYDIT+R +F+++ WLE+ R H++ N++IML+GNKSDLE+ R V E+ + FA + GL FMETSA ++NVE AF+ EIY + + N+ Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB2A_HUMAN (Ras-related protein Rab-2A OS=Homo sapiens GN=RAB2A PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.714e-45 Identity = 87/176 (49.43%), Postives = 121/176 (68.75%), Query Frame = 2 Query: 95 YVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 622 Y+FK ++IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R++T +YYRGA GA+LVYDIT+R +F+++ WLE+ R H++ N++IML+GNKSDLE+ R V E+ + FA + GL FMETSA ++NVE AF+ EIY + + N+ Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB2A_CHICK (Ras-related protein Rab-2A OS=Gallus gallus GN=RAB2A PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.714e-45 Identity = 87/176 (49.43%), Postives = 121/176 (68.75%), Query Frame = 2 Query: 95 YVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 622 Y+FK ++IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R++T +YYRGA GA+LVYDIT+R +F+++ WLE+ R H++ N++IML+GNKSDLE+ R V E+ + FA + GL FMETSA ++NVE AF+ EIY + + N+ Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180 The following BLAST results are available for this feature:
BLAST of CX294570 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294570 ID=CX294570; Name=CX294570; organism=Citrus clementina; type=EST; length=660bpback to top |