CX294570
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB2A_CANFA (Ras-related protein Rab-2A OS=Canis familiaris GN=RAB2A PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.714e-45 Identity = 87/176 (49.43%), Postives = 121/176 (68.75%), Query Frame = 2 Query: 95 YVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 622 Y+FK ++IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R++T +YYRGA GA+LVYDIT+R +F+++ WLE+ R H++ N++IML+GNKSDLE+ R V E+ + FA + GL FMETSA ++NVE AF+ EIY + + N+ Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB1A_RAT (Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3) HSP 1 Score: 181.8 bits (460), Expect = 2.714e-45 Identity = 88/168 (52.38%), Postives = 125/168 (74.40%), Query Frame = 2 Query: 80 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEI 583 N + DY+FK++LIGDS VGKS LL RFA D ++ +TIGV+F+ +T+ + K +K QIWDTAGQER+R +TS+YYRGA G ++VYD+T ++SF+NV +WL+E+ +A +N+ +LVGNK DL T + V AKEFA+ G+ F+ETSA +TNVE +F+T+ EI Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB1A_MOUSE (Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3) HSP 1 Score: 181.8 bits (460), Expect = 2.714e-45 Identity = 88/168 (52.38%), Postives = 125/168 (74.40%), Query Frame = 2 Query: 80 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEI 583 N + DY+FK++LIGDS VGKS LL RFA D ++ +TIGV+F+ +T+ + K +K QIWDTAGQER+R +TS+YYRGA G ++VYD+T ++SF+NV +WL+E+ +A +N+ +LVGNK DL T + V AKEFA+ G+ F+ETSA +TNVE +F+T+ EI Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB1A_HUMAN (Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3) HSP 1 Score: 181.8 bits (460), Expect = 2.714e-45 Identity = 88/168 (52.38%), Postives = 125/168 (74.40%), Query Frame = 2 Query: 80 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEI 583 N + DY+FK++LIGDS VGKS LL RFA D ++ +TIGV+F+ +T+ + K +K QIWDTAGQER+R +TS+YYRGA G ++VYD+T ++SF+NV +WL+E+ +A +N+ +LVGNK DL T + V AKEFA+ G+ F+ETSA +TNVE +F+T+ EI Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB1A_CANFA (Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3) HSP 1 Score: 181.8 bits (460), Expect = 2.714e-45 Identity = 88/168 (52.38%), Postives = 125/168 (74.40%), Query Frame = 2 Query: 80 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEI 583 N + DY+FK++LIGDS VGKS LL RFA D ++ +TIGV+F+ +T+ + K +K QIWDTAGQER+R +TS+YYRGA G ++VYD+T ++SF+NV +WL+E+ +A +N+ +LVGNK DL T + V AKEFA+ G+ F+ETSA +TNVE +F+T+ EI Sbjct: 5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB1B_PIG (Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.545e-45 Identity = 90/181 (49.72%), Postives = 129/181 (71.27%), Query Frame = 2 Query: 80 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 622 N + DY+FK++LIGDS VGKS LL RFA D ++ +TIGV+F+ +T+ + K +K QIWDTAGQER R +TS+YYRGA G ++VYD+T ++S+ NV +WL+E+ +A +N+ +LVGNKSDL T + V AKEFA+ G+ F+ETSA +TNVE AF+T+ EI + + A + + Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 182
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1 PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 4.630e-45 Identity = 89/168 (52.98%), Postives = 124/168 (73.81%), Query Frame = 2 Query: 80 NNKIDYVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEI 583 N + DY+FK++LIGDS VGKS LL RFA D ++ +TIGV+F+ +T+ + K +K QIWDTAGQER+R +TS+YYRGA G ++VYD+T ++SF+NV +WL E+ +A +N+ +LVGNKSDL R V T+ AKEFAE G+ F+ETSA + NVE AF+ + +I Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQI 169
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB2_LYMST (Ras-related protein Rab-2 OS=Lymnaea stagnalis GN=RAB2 PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.047e-45 Identity = 87/176 (49.43%), Postives = 119/176 (67.61%), Query Frame = 2 Query: 95 YVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 622 Y+FK ++IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R++T +YYRGA GA+LVYDIT+R +F+++ WLE+ R H++ N++IML+GNKSDLE R V E+ + FA + GL FMETSA + NVE AF+ EIY+ + N+ Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQDGVFDINN 180
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB2A_RAT (Ras-related protein Rab-2A OS=Rattus norvegicus GN=Rab2a PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.047e-45 Identity = 86/176 (48.86%), Postives = 121/176 (68.75%), Query Frame = 2 Query: 95 YVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 622 Y+FK ++IGD+ VGKS LL +F F T+GVEF + + I K +K QIWDTAGQE +R++T +YYRGA GA+LVYDIT+R +F+++ WLE+ R H++ N++IML+GNKSDLE+ R V E+ + FA + GL FMETSA ++NVE AF+ EIY + + N+ Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTMGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
BLAST of CX294570 vs. ExPASy Swiss-Prot
Match: RAB2B_HUMAN (Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 7.898e-45 Identity = 87/169 (51.48%), Postives = 119/169 (70.41%), Query Frame = 2 Query: 95 YVFKIVLIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSK 601 Y+FK ++IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R++T +YYRGA GA+LVYDIT+R++F+++ WLE+ R H+ N++IML+GNKSDLE+ R V E+ + FA + GL FMETSA + NVE AF+ EIYR + + Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQ 173 The following BLAST results are available for this feature:
BLAST of CX294570 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294570 ID=CX294570; Name=CX294570; organism=Citrus clementina; type=EST; length=660bpback to top |