CX294583
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_CHLRE (40S ribosomal protein S3a OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_168484 PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 5.529e-31 Identity = 63/90 (70.00%), Postives = 76/90 (84.44%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA 270 ++QIRQIR+KM EI+ +A SCDLK LV KFI E IG++IEK+ IYPLQN FIRKVK+LKAPKFD+ KLMEVHGDYSE+VG K++RPA Sbjct: 158 SAQIRQIRKKMMEIITREATSCDLKELVAKFIPESIGKDIEKSCQGIYPLQNTFIRKVKVLKAPKFDITKLMEVHGDYSEEVGAKIERPA 247
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A2_VITVI (40S ribosomal protein S3a-2 OS=Vitis vinifera GN=GSVIVT00031140001 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.362e-29 Identity = 66/73 (90.41%), Postives = 68/73 (93.15%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME 219 +SQIRQIRRKMREIM QAASCDLK LV KFI E+IGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME Sbjct: 158 SSQIRQIRRKMREIMTTQAASCDLKELVRKFIPEMIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLME 230
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_LENED (40S ribosomal protein S1 OS=Lentinula edodes GN=RPS1 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.967e-28 Identity = 57/93 (61.29%), Postives = 76/93 (81.72%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 279 +SQ+R+IR+KM EIM +A +CDLK LV+KF+ E IGREIEKA+ SIYPLQNV++RK KILKAPKFD+ KLME+HG+ +++ G K+ + EP Sbjct: 158 SSQVREIRKKMFEIMTREATNCDLKELVQKFVPEAIGREIEKASRSIYPLQNVYVRKAKILKAPKFDVSKLMELHGESTDETGTKIAKDFKEP 250
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_COPC7 (40S ribosomal protein S1 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=RPS1 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 4.381e-28 Identity = 57/93 (61.29%), Postives = 76/93 (81.72%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 279 T+Q+R++R+KM EI+ +A SCDLK LV+KF+ E IGREIEKA+ SIYPLQNV+IRK KILKAPKFD+ KL+E+HGD +++ G +V + EP Sbjct: 158 TAQVRELRKKMFEIITREATSCDLKELVQKFVPEAIGREIEKASRSIYPLQNVYIRKAKILKAPKFDVSKLLELHGDSTDESGTRVTKDFKEP 250
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_POSPM (40S ribosomal protein S1 OS=Postia placenta (strain ATCC 44394 / Madison 698-R) GN=RPS1 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 5.722e-28 Identity = 59/93 (63.44%), Postives = 74/93 (79.57%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 279 +SQIRQIR+KM EIM +A+SCDLK LV+KFI E IGREIEKA IYPLQNVF+ K KILKAPKFD+ KL+E+HG+ +++ G +V + EP Sbjct: 158 SSQIRQIRQKMFEIMTREASSCDLKELVQKFIPEAIGREIEKAARGIYPLQNVFVHKAKILKAPKFDMSKLLELHGESTDETGTRVVKDFKEP 250
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_OSTLU (40S ribosomal protein S3a OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_28528 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 5.722e-28 Identity = 65/97 (67.01%), Postives = 76/97 (78.35%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPMPE 288 ++QIR+IR KM EI+ + +CDLK LV KFI EVIG+EIEK+ + IYPLQNV+IRKVKILKAPKFDL KLMEVHGDYS E VG V RP +E E Sbjct: 158 SAQIRKIRAKMVEIITRECTTCDLKELVLKFIPEVIGKEIEKSCAGIYPLQNVYIRKVKILKAPKFDLTKLMEVHGDYSGEAVGEAVARPVEEKAEE 254
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_LACBS (40S ribosomal protein S1 OS=Laccaria bicolor (strain S238N-H82) GN=RPS1 PE=3 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 7.473e-28 Identity = 55/93 (59.14%), Postives = 75/93 (80.65%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEP 279 +SQ+R+IR+KM EIM +A +CDLK LV+KF+ E IGREIEKA SIYPLQNV++RK KILK+PKFD+ KL+E+HGD +++ G ++ + EP Sbjct: 158 SSQVREIRKKMFEIMTREATNCDLKELVQKFVPEAIGREIEKAARSIYPLQNVYVRKAKILKSPKFDMSKLLELHGDSTDETGTRIAKDFKEP 250
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_TORRU (40S ribosomal protein S3a OS=Tortula ruralis GN=RPS3A PE=2 SV=3) HSP 1 Score: 117.857 bits (294), Expect = 3.140e-26 Identity = 63/87 (72.41%), Postives = 73/87 (83.91%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSS-IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 258 +SQI IRRKMREIMV +A +CDLK LV KFI EVIG+EI++ S IYPLQ+ FIRKVKILKAPKFDL KLMEVHGDY+E+VG K+ Sbjct: 156 SSQIA-IRRKMREIMVKEAQTCDLKELVAKFIPEVIGKEIDEWRSQGIYPLQSTFIRKVKILKAPKFDLMKLMEVHGDYNEEVGAKI 241
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_ASPCL (40S ribosomal protein S1 OS=Aspergillus clavatus GN=rps1 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.658e-25 Identity = 61/98 (62.24%), Postives = 73/98 (74.49%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKVDRPADEPMPEA 291 +SQIR IR+KM EIM +AASC L L K I EVIGREIEKAT IYPLQNV IRKVK+LKAPKFDLG L+ +HG+ ++D G KV+R E + E+ Sbjct: 158 SSQIRAIRKKMTEIMQREAASCSLAQLTHKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKAPKFDLGALLNLHGESTTDDKGQKVEREFKEQVLES 255
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_ASPOR (40S ribosomal protein S1 OS=Aspergillus oryzae GN=rps1 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 4.534e-25 Identity = 61/98 (62.24%), Postives = 73/98 (74.49%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKVDRPADEPMPEA 291 +SQIR IR+KM EIM +AASC L L K I EVIGREIEKAT IYPLQNV IRKVK+LKAPKFDLG L+ +HG+ ++D G KV+R E + E+ Sbjct: 158 SSQIRAIRKKMTEIMQREAASCTLSQLTTKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKAPKFDLGALLNLHGESTTDDKGHKVEREFKEQVLES 255 The following BLAST results are available for this feature:
BLAST of CX294583 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 148
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294583 ID=CX294583; Name=CX294583; organism=Citrus clementina; type=EST; length=531bpback to top |