CX294583
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_DROGR (40S ribosomal protein S3a OS=Drosophila grimshawi GN=RpS3A PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.847e-16 Identity = 46/106 (43.40%), Postives = 68/106 (64.15%), Query Frame = 1 Query: 4 SQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD----YSEDV----GVKVDRPA--DEPMPEA 291 SQ+R+IR +M +I+ + + DLK LV K + I ++IEK+ IYPL +V+IRKVK+LK P+FD+ KL+E+H D +E V G +DRP + P+ EA Sbjct: 162 SQVRKIRARMTDIITNEVSGVDLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHNDGGGKTTEAVVSAEGAVIDRPEGYEPPVQEA 267
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_BOMMA (40S ribosomal protein S3a OS=Bombyx mandarina PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.562e-16 Identity = 41/91 (45.05%), Postives = 62/91 (68.13%), Query Frame = 1 Query: 4 SQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKVDRP 267 +Q+R IR+KM EI+ + +L+ +V K I + I ++IEKA IYPL++V IRKVK+LK P+F++ KLME+HG+ + G K +RP Sbjct: 162 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEGGGGKREAGDKSERP 252
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_SPOFR (40S ribosomal protein S3a OS=Spodoptera frugiperda PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 8.570e-16 Identity = 41/92 (44.57%), Postives = 62/92 (67.39%), Query Frame = 1 Query: 4 SQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE----DVGVKVDRP 267 +Q+R IR+KM EI+ + +L+ +V K I + I ++IEKA IYPL++V IRKVK+LK P+F++ KLME+HG+ + G K +RP Sbjct: 162 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEGGSGKRGEAGDKSERP 253
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_SCHJA (40S ribosomal protein S3a OS=Schistosoma japonicum GN=SJCHGC01275 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 8.570e-16 Identity = 43/90 (47.78%), Postives = 61/90 (67.78%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKVDRP 267 T++I++IR ++ EI+ + ++CDLK +V K I + I ++ KA S IYPL FIRKVK+LK PK DL +LME+HG+ S G V RP Sbjct: 159 TTRIKRIRARLVEIIQQEVSTCDLKEVVNKLIPDSIAQDARKAASWIYPLGETFIRKVKVLKRPKADLARLMELHGESKSTAPGETVSRP 248
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_BOMMO (40S ribosomal protein S3a OS=Bombyx mori PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.119e-15 Identity = 41/91 (45.05%), Postives = 62/91 (68.13%), Query Frame = 1 Query: 4 SQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKVDRP 267 +Q+R IR+KM EI+ + +L+ +V K I + I ++IEKA IYPL++V IRKVK+LK P+F++ KLME+HG+ + G K +RP Sbjct: 162 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEGGGGKGEAGDKSERP 252
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_TAESO (40S ribosomal protein S3a OS=Taenia solium PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.462e-15 Identity = 38/90 (42.22%), Postives = 63/90 (70.00%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKVDRP 267 T++I+++R K+ E++ + A CDLKS+V+K I + IG++ SSI+PL +RKVK+LK PK DLG+++E+H + +++ G V RP Sbjct: 157 TTRIKKLRAKIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNEASSIFPLSGALVRKVKVLKKPKLDLGRILELHSEGKADEFGEGVPRP 246
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_PODAN (40S ribosomal protein S1 OS=Podospora anserina GN=RPS1 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.508e-12 Identity = 35/53 (66.04%), Postives = 41/53 (77.36%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNV 159 +SQIR IR+KM EI+ +A+SC L+ L K I EVIGREIEKAT IYPLQNV Sbjct: 158 SSQIRAIRKKMTEIIQREASSCTLQQLTSKLIPEVIGREIEKATQGIYPLQNV 210
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_TETTH (40S ribosomal protein S3a OS=Tetrahymena thermophila GN=TTHERM_00047480 PE=3 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 8.301e-11 Identity = 32/75 (42.67%), Postives = 48/75 (64.00%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVH 225 +SQ+R IRRK+ + +AA + + I E ++IEK T +I+PLQN+ IRKVK+LK PK D K+ E++ Sbjct: 164 SSQVRAIRRKINTFITNEAAKLGIAEFSKNLIGEDYTKKIEKETKNIFPLQNITIRKVKVLKRPKLDATKIAELY 238 The following BLAST results are available for this feature:
BLAST of CX294583 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 148
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294583 ID=CX294583; Name=CX294583; organism=Citrus clementina; type=EST; length=531bpback to top |