CX294583
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A1_SCHPO (40S ribosomal protein S1-A OS=Schizosaccharomyces pombe GN=rps101 PE=2 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 4.243e-23 Identity = 55/86 (63.95%), Postives = 69/86 (80.23%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 258 +SQIR I +KM +++ QA C +K LV+K I EVIGR IEKAT++IYPLQNVF+RKVKILKAPK D KL+E+HG+ S+DVG KV Sbjct: 158 SSQIRAIHQKMFQVIQNQANGCSMKELVQKLIPEVIGRAIEKATNNIYPLQNVFVRKVKILKAPKHDAQKLLELHGE-SQDVGSKV 242
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_SCHJY (40S ribosomal protein S1 OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) GN=rps1 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 9.453e-23 Identity = 52/86 (60.47%), Postives = 68/86 (79.07%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 258 +SQIR IR+KM +++ QA C ++ LV+K I E+IGREIEKAT I+PLQNVF+RKVKILK+PK D KL+E HG+ ++DVG KV Sbjct: 158 SSQIRAIRQKMFQVIQNQATGCSMRELVQKLIPEIIGREIEKATGGIFPLQNVFVRKVKILKSPKLDAQKLLEQHGE-AQDVGTKV 242
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_NANOT (40S ribosomal protein S1 OS=Nannizzia otae (strain CBS 113480) GN=RPS1 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 9.453e-23 Identity = 58/98 (59.18%), Postives = 73/98 (74.49%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPMPEA 291 +SQIR IR+KM EI+ QA+SC L L K + EVIGREIEK+T IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ S +D G KV+R E + E+ Sbjct: 158 SSQIRAIRKKMTEIIQRQASSCTLTQLT-KLVPEVIGREIEKSTQGIYPLQNVHIRKVKLLKSPKFDLGALLALHGEASTDDKGQKVEREFKEKVLES 254
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_MALGO (40S ribosomal protein S1 OS=Malassezia globosa (strain ATCC 96807 / CBS 7966) GN=RPS1 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.613e-22 Identity = 55/102 (53.92%), Postives = 73/102 (71.57%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS----EDVGVKV-DRPADEPMPEA 291 +SQI IR+KM E++ +++SCDL+ V K I EV+GREIEK+T IYPL++VFI KVK+LK PKFD+ KL E+HG S EDVG K+ EP+P+A Sbjct: 157 SSQIHAIRKKMFEVIQRESSSCDLREFVAKLIPEVMGREIEKSTQGIYPLKDVFIHKVKVLKRPKFDVNKLYELHGGASVVGAEDVGTKIKSGEFKEPVPQA 258
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_USTMA (40S ribosomal protein S1 OS=Ustilago maydis GN=RPS1 PE=3 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 4.692e-22 Identity = 57/102 (55.88%), Postives = 72/102 (70.59%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY----SEDVGVKV-DRPADEPMPEA 291 +S IR IR+KM EI+ +A SCDL+ V K I EVIGRE+EKAT I+PL++V++RKVK+LKAPK DL KL+EVHG +ED GVK + EP P A Sbjct: 157 SSHIRAIRQKMFEIVQREANSCDLREFVAKLIPEVIGREVEKATQGIFPLKDVYVRKVKVLKAPKDDLNKLLEVHGGAAIAGAEDAGVKARNTEFKEPAPLA 258
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_PLAVI (40S ribosomal protein S3a OS=Plasmodium vivax GN=PVX_095080 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 4.692e-22 Identity = 53/86 (61.63%), Postives = 64/86 (74.42%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 258 TSQI++IR+KM +IM A+A+ LK LV+KFI E IG+E+EK IYPLQNV IRKVKILK PK D+ KLME+H D ED G V Sbjct: 158 TSQIKKIRKKMVDIMNAEASKVMLKDLVKKFIPESIGKEVEKQCKKIYPLQNVLIRKVKILKRPKLDISKLMELHTDSKEDAGKNV 243
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_PLAKH (40S ribosomal protein S3a OS=Plasmodium knowlesi (strain H) GN=PKH_081740 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 6.128e-22 Identity = 53/86 (61.63%), Postives = 64/86 (74.42%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 258 TSQI++IR+KM +IM A+A+ LK LV+KFI E IG+E+EK IYPLQNV IRKVKILK PK D+ KLME+H D ED G V Sbjct: 158 TSQIKKIRKKMVDIMNAEASKVLLKDLVKKFIPESIGKEVEKQCKKIYPLQNVLIRKVKILKRPKLDISKLMELHTDSKEDAGKNV 243
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_PLAF7 (40S ribosomal protein S3a OS=Plasmodium falciparum (isolate 3D7) GN=MAL3P7.35 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.045e-21 Identity = 53/87 (60.92%), Postives = 65/87 (74.71%), Query Frame = 1 Query: 1 TSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVD 261 TSQI++IR+KM +IM A+A+ LK LV+KFI E IG+EIEK IYPLQNV IRKVKILK PK D+ KLME+H D E+ G V+ Sbjct: 158 TSQIKKIRKKMVDIMTAEASKVLLKDLVKKFIPESIGKEIEKQCKKIYPLQNVLIRKVKILKRPKLDISKLMELHTDPKEESGKNVN 244
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_MACFA (40S ribosomal protein S3a OS=Macaca fascicularis GN=RPS3A PE=2 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 2.328e-21 Identity = 51/93 (54.84%), Postives = 68/93 (73.12%), Query Frame = 1 Query: 7 QIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDR 264 Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R Sbjct: 160 QVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVER 252
BLAST of CX294583 vs. ExPASy Swiss-Prot
Match: RS3A_HUMAN (40S ribosomal protein S3a OS=Homo sapiens GN=RPS3A PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 2.328e-21 Identity = 51/93 (54.84%), Postives = 68/93 (73.12%), Query Frame = 1 Query: 7 QIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDR 264 Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R Sbjct: 160 QVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVER 252 The following BLAST results are available for this feature:
BLAST of CX294583 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 148
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294583 ID=CX294583; Name=CX294583; organism=Citrus clementina; type=EST; length=531bpback to top |