CX294590
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294590 vs. ExPASy Swiss-Prot
Match: IDI1_PONAB (Isopentenyl-diphosphate Delta-isomerase 1 OS=Pongo abelii GN=IDI1 PE=2 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 2.856e-37 Identity = 79/139 (56.83%), Postives = 96/139 (69.06%), Query Frame = 2 Query: 11 NDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELVICAEDVPVDEFTPLGRILYMASSDGTWVEHELDYLLFIVRDASFTPN 427 ND +G E K NCHL E IE LLHRAFSVFLFN++ +LLLQQRS K+T P +TNTCCSHPL EL E +ALGVR AAQR+L EL I E+VP +E L RI Y A SDG W EHE+DY+L + ++ + P+ Sbjct: 27 NDNKIGAETKKNCHLNENIEK-GLLHRAFSVFLFNTENKLLLQQRSDAKITLPGCFTNTCCSHPLSNPGELEENDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILLVRKNVTLNPD 164
BLAST of CX294590 vs. ExPASy Swiss-Prot
Match: IDI1_MOUSE (Isopentenyl-diphosphate Delta-isomerase 1 OS=Mus musculus GN=Idi1 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 3.157e-36 Identity = 75/139 (53.96%), Postives = 98/139 (70.50%), Query Frame = 2 Query: 11 NDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELVICAEDVPVDEFTPLGRILYMASSDGTWVEHELDYLLFIVRDASFTPN 427 ND +G + K NCHL E I+ LLHRAFSVFLFN++ +LLLQQRS K+TFP +TN+CCSHPL EL E NA+GV+ AA+R+L EL I E+V ++E L RI Y A SDG W EHE+DY+LF+ ++ + P+ Sbjct: 27 NDNKIGADTKKNCHLNENIDK-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNSCCSHPLSNPGELEENNAIGVKRAAKRRLKAELGIPLEEVDLNEMDYLTRIYYKAQSDGIWGEHEVDYILFLRKNVTLNPD 164
BLAST of CX294590 vs. ExPASy Swiss-Prot
Match: IDI1_RAT (Isopentenyl-diphosphate Delta-isomerase 1 OS=Rattus norvegicus GN=Idi1 PE=2 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 4.124e-36 Identity = 74/139 (53.24%), Postives = 98/139 (70.50%), Query Frame = 2 Query: 11 NDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELVICAEDVPVDEFTPLGRILYMASSDGTWVEHELDYLLFIVRDASFTPN 427 ND +G + K NCHL E I+ L+HRAFSVFLFN++ +LLLQQRS K+TFP +TN+CCSHPL EL E +A+GV+ AAQR+L EL I E+V ++E L RI Y A SDG W EHE+DY+LF+ ++ + P+ Sbjct: 27 NDNKIGADTKKNCHLNENIDK-GLIHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNSCCSHPLNNPGELEENDAMGVKRAAQRRLKAELGIPLEEVDLNEMNYLTRIYYKAQSDGIWGEHEIDYILFLRKNVTLNPD 164
BLAST of CX294590 vs. ExPASy Swiss-Prot
Match: IDI1_MESAU (Isopentenyl-diphosphate Delta-isomerase 1 OS=Mesocricetus auratus GN=IDI1 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 7.034e-36 Identity = 75/139 (53.96%), Postives = 97/139 (69.78%), Query Frame = 2 Query: 11 NDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELVICAEDVPVDEFTPLGRILYMASSDGTWVEHELDYLLFIVRDASFTPN 427 ND +G + K NCHL E I+ LLHRAFSVFLFN++ +LLLQQRS K+TFP +TN+CCSHPL EL E +A+GV+ AAQR+L EL I E+V +E L RI Y A SDG W EHE+DY+LF+ ++ + P+ Sbjct: 27 NDNKIGADTKKNCHLNENIDK-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNSCCSHPLSNPGELEENDAIGVKRAAQRRLKAELGIPLEEVDPNEMHYLTRIYYKAQSDGIWGEHEIDYILFLKKNVTLNPD 164
BLAST of CX294590 vs. ExPASy Swiss-Prot
Match: IDI1_PHARH (Isopentenyl-diphosphate Delta-isomerase OS=Phaffia rhodozyma GN=IDI PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 4.267e-33 Identity = 75/141 (53.19%), Postives = 90/141 (63.83%), Query Frame = 2 Query: 11 NDRVVGHENKYNCHLMEKIES-LNLLHRAFSVFLFN-SKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELVICAEDVPVDEFTPLGRILYMASSDGTWVEHELDYLLFIVRDASFTPN 427 +D G +K CHLM I + +LLHRAFSVFLF S LLLQ+R+ K+TFP +WTNTCCSHPL + E+ EEN +GVR AA RKL EL + P D FT L RI Y+A SDG W EHE+DY+LF T N Sbjct: 40 DDVAYGEASKKTCHLMSNINAPKDLLHRAFSVFLFRPSDGALLLQRRADEKITFPGMWTNTCCSHPLSIKGEVKEENQIGVRRAASRKLEHELGVPTSSTPPDSFTYLTRIHYLAPSDGLWGEHEIDYILFSTTPTEHTGN 180
BLAST of CX294590 vs. ExPASy Swiss-Prot
Match: IDI2_HUMAN (Isopentenyl-diphosphate Delta-isomerase 2 OS=Homo sapiens GN=IDI2 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.793e-31 Identity = 69/139 (49.64%), Postives = 94/139 (67.63%), Query Frame = 2 Query: 11 NDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELVICAEDVPVDEFTPLGRILYMASSDGTWVEHELDYLLFIVRDASFTPN 427 ND+V+G + K NCHL E IE LLHRAFSV LFN+K +L+QQRS TKVTFP +T++C SHPLY +EL E++A+GVR AAQR+L EL I E + ++ + + A SD W EHE+ YLL + ++ + P+ Sbjct: 27 NDKVIGADTKRNCHLNENIEK-GLLHRAFSVVLFNTKNRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGEQISPEDIVFMTIYHHKAKSDRIWGEHEICYLLLVRKNVTLNPD 164
BLAST of CX294590 vs. ExPASy Swiss-Prot
Match: IDI1_SCHPO (Isopentenyl-diphosphate Delta-isomerase OS=Schizosaccharomyces pombe GN=idi1 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 3.058e-31 Identity = 71/132 (53.79%), Postives = 88/132 (66.67%), Query Frame = 2 Query: 11 NDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESE---LIEENALGVRNAAQRKLLDELVICAEDVPVDEFTPLGRILYMASSDGTWVEHELDYLLF 397 ND + + K CHLME I LLHRAFS+F+F+ + LLLQQR+ K+TFP +WTNTCCSHPL E + E GV+NAAQRKL EL I A+ +P D+F L RI Y+A S G W EHE+DY+LF Sbjct: 28 NDVPLRYGTKKECHLMENINK-GLLHRAFSMFIFDEQNRLLLQQRAEEKITFPSLWTNTCCSHPLDVAGERGNTLPEAVEGVKNAAQRKLFHELGIQAKYIPKDKFQFLTRIHYLAPSTGAWGEHEIDYILF 158
BLAST of CX294590 vs. ExPASy Swiss-Prot
Match: IDI1_YEAST (Isopentenyl-diphosphate Delta-isomerase OS=Saccharomyces cerevisiae GN=IDI1 PE=1 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 7.050e-28 Identity = 69/135 (51.11%), Postives = 86/135 (63.70%), Query Frame = 2 Query: 11 NDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESEL-----IEENALGVRNAAQRKLLDELVICAEDVPV-DEFTPLGRILYMASSDGTWVEHELDYLLF 397 +D +G K CHLME IE LLHRAFSVF+FN + ELLLQQR+ K+TFP +WTNTCCSHPL + EL +++ G AA RKL EL I ++ +F L RI YMA S+ W EHE+DY+LF Sbjct: 80 DDNAIGAGTKKVCHLMENIEK-GLLHRAFSVFIFNEQGELLLQQRATEKITFPDLWTNTCCSHPLCIDDELGLKGKLDDKIKGAITAAVRKLDHELGIPEDETKTRGKFHFLNRIHYMAPSNEPWGEHEIDYILF 213
BLAST of CX294590 vs. ExPASy Swiss-Prot
Match: IDI_DICDI (Isopentenyl-diphosphate Delta-isomerase OS=Dictyostelium discoideum GN=ipi PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.571e-27 Identity = 67/136 (49.26%), Postives = 93/136 (68.38%), Query Frame = 2 Query: 11 NDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLY-RESELIEENALGVRNAAQRKLLDELVICAEDVPVDEFTPLGRILYMASS--DGTWVEHELDYLLFIVRD 409 +D+ + +K HLM I + LLHRAFS+FLFN + +LLLQQR+ K+TFP WTNT CSHPL+ SEL+EENA GV+ AA+RKL EL + + V +D+FT + +I Y + S D W EHE+D++L + +D Sbjct: 34 DDKPIRPGSKKETHLMVNINN-GLLHRAFSIFLFNGEGKLLLQQRALEKITFPGYWTNTVCSHPLWIVGSELVEENAQGVKIAAKRKLNHELGVPLDQVNIDDFTFMTKIHYKSESKEDPQWGEHEIDHILIMQKD 168
BLAST of CX294590 vs. ExPASy Swiss-Prot
Match: IDI_SERP5 (Isopentenyl-diphosphate Delta-isomerase OS=Serratia proteamaculans (strain 568) GN=idi PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.056e-15 Identity = 49/127 (38.58%), Postives = 69/127 (54.33%), Query Frame = 2 Query: 11 NDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELVICAEDVPVDEFTPLGRILYMASSDGTWVEHELDYL 391 +D +G ++K H LLHRAFS+F+F+S+ LLLQQR+ +K +WTN+CC HP + ES L AAQR+L +E+ AE V FT Y A+ G +EHE D++ Sbjct: 11 DDNAIGSQSKTRVHQQ------GLLHRAFSIFIFDSQGRLLLQQRAFSKYHSAGLWTNSCCGHPRWGESTLA---------AAQRRLQEEMGFSAELQQVSSFT------YQAAVPGDLIEHEFDHI 116 The following BLAST results are available for this feature:
BLAST of CX294590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294590 ID=CX294590; Name=CX294590; organism=Citrus clementina; type=EST; length=427bpback to top |