CX294590
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294590 vs. ExPASy Swiss-Prot
Match: IDI_NOCFA (Isopentenyl-diphosphate Delta-isomerase OS=Nocardia farcinica GN=idi PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.291e-13 Identity = 49/128 (38.28%), Postives = 64/128 (50.00%), Query Frame = 2 Query: 47 CHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELVICAEDVPVDEFTPLGRILYMASSDGTW-VEHELDYLLFIVRDASFTPN 427 C + E LHRAFSV LF++ +LLQQR+ K FPL+W NTCC HP ES V AA +L +EL + A T +G Y A+ T VEHE D++L D + P+ Sbjct: 16 CPVAEAHRDPGKLHRAFSVLLFDTAGRVLLQQRAAVKTRFPLLWANTCCGHPAPGES---------VEAAAATRLAEELGVAA------GLTEVGVFRYRAADTATGRVEHEWDHVLIGTLDTTPHPD 128
BLAST of CX294590 vs. ExPASy Swiss-Prot
Match: IDI_ERWCT (Isopentenyl-diphosphate Delta-isomerase OS=Erwinia carotovora subsp. atroseptica GN=idi PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.202e-13 Identity = 48/134 (35.82%), Postives = 68/134 (50.75%), Query Frame = 2 Query: 11 NDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELVI-CAEDVPVDEFTPLGRILYMASSDGTWVEHELDYLLFIVRD 409 ND+ G K H+ + LHRA +V++FNS+ +LLLQQR+ K +W+NTCCSHP E L AA R+L +E+ + CA TP+ + Y D +EHEL ++ F V D Sbjct: 12 NDKPTGVMEKQEAHVKGE------LHRAITVYIFNSRQQLLLQQRAEEKYHSGGLWSNTCCSHPAPGEETL---------QAAHRRLYEEMGLRCA-------LTPMFTLTYRLQLDNGLIEHELGHVYFGVTD 123
BLAST of CX294590 vs. ExPASy Swiss-Prot
Match: IDI1_AZOSE (Isopentenyl-diphosphate Delta-isomerase 1 OS=Azoarcus sp. (strain EbN1) GN=idi1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.061e-11 Identity = 47/140 (33.57%), Postives = 66/140 (47.14%), Query Frame = 2 Query: 11 NDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDEL-VICAEDVPVDEFTPLGRILYMASSDGTWVEHELDYLLFIVRDASFTPN 427 ND +G E K H LHRA S+F+F+S LLLQ+R+ +K +W+NTCCSHP RE AA+R+L +E+ + C DV +Y A +E+E D++ F D PN Sbjct: 11 NDTEIGVEGKMIAHRSGS------LHRAISIFIFDSADRLLLQKRAASKYHSAGLWSNTCCSHPRPREE---------CARAARRRLREEMGIACELDVKFG-------FVYRAVLTNHLIENEFDHVFFGRHDGDPVPN 128
BLAST of CX294590 vs. ExPASy Swiss-Prot
Match: IDI_BURM1 (Isopentenyl-diphosphate Delta-isomerase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=idi PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.515e-11 Identity = 44/127 (34.65%), Postives = 65/127 (51.18%), Query Frame = 2 Query: 11 NDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELVICAEDVPVDEFTPLGRILYMASSDGTWVEHELDYL 391 +DR +G K H LLHRAFS+F+F+S LLLQQR+ K +W+NTCC HP RE+ + +A +R+L +E+ E PVD ++Y A + +EHE ++ Sbjct: 11 DDRPIGICEKMRAH------HEGLLHRAFSIFVFDSAGRLLLQQRALNKYHSGGLWSNTCCGHPRPREA---------LPDAVRRRLGEEMGFACELRPVD------ALVYRARFENDLIEHEFVHI 116
BLAST of CX294590 vs. ExPASy Swiss-Prot
Match: IDI1_PHOLL (Isopentenyl-diphosphate Delta-isomerase 1 OS=Photorhabdus luminescens subsp. laumondii GN=idi1 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.831e-11 Identity = 47/139 (33.81%), Postives = 69/139 (49.64%), Query Frame = 2 Query: 11 NDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELVICAEDVPVDEFTPLGRILYMASSDGTWVEHELDYLLFIVRDASFTPN 427 ND VG NK + HL + + LHRAFS F+ NSK E+ +QQR+ +K+ +P W+N+ CSHP E + +A R+ +EL I + P +F L + Y EHEL ++ + D T N Sbjct: 10 NDNRVGCINKIDAHL-----NGDHLHRAFSCFIINSKNEVYIQQRAQSKLLWPGYWSNSYCSHPRPDEE---------ISHAVMRRAEEELGIVINEEP--KF--LYKFQYKEKYKDVGYEHELCHVFVVFTDTPPTEN 130 The following BLAST results are available for this feature:
BLAST of CX294590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294590 ID=CX294590; Name=CX294590; organism=Citrus clementina; type=EST; length=427bpback to top |