CX294592

Overview
NameCX294592
Unique NameCX294592
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: CP2DR_MESAU (Cytochrome P450 2D27 OS=Mesocricetus auratus GN=CYP2D27 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.022e-13
Identity = 36/129 (27.91%), Postives = 68/129 (52.71%), Query Frame = 3
Query:  300 EVKLERHSLKAVTQDLLAGGTESSAVTVEWAISELMKKPKLLKKATEELDRVVGKERWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPAFVGNPNEF 686
            E      +L+ V  D+   G  +++ T+ WA+  ++  P +  +  +E+D V+G+ R  E  D   +P+ +A++ E  R   ++P  +P M S D +V G+ IPKGT ++ N+ ++ +D      P  F
Sbjct:  290 ESSFNDENLRMVVADMFIAGMVTTSTTLSWALLLMILHPDVQSRVQQEIDDVIGQVRRPEMADQARMPYTNAVIHEVQRFGDIAPVNIPHMTSHDVEVQGFLIPKGTTLIPNLSSVLKDETVWEKPLHF 418          
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: CP2AC_MOUSE (Cytochrome P450 2A12 OS=Mus musculus GN=Cyp2a12 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.022e-13
Identity = 41/174 (23.56%), Postives = 86/174 (49.43%), Query Frame = 3
Query:  168 LAKKFDRLFEYELDDHNARRKGVDNYEAKDMMD-VLLQLADDPTLEVKLERHSLKAVTQDLLAGGTESSAVTVEWAISELMKKPKLLKKATEELDRVVGKERWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPAFVGNPNEF 686
            + K   +L ++ +      +  +D    +D +D  L+ +  +  +  +    +L   + +L   G+E+ + T+ +    LMK P +  K  EE+DRV+G+ R  + +D + +P+  A++ E  R    +P  +PR  +++    G+ +PK T V   + ++  DP F  +P +F
Sbjct:  236 IIKDSHKLEDFMIQKVKQNQSTLDPNSPRDFIDSFLIHMQKEKYVNSEFHMKNLVMTSLNLFFAGSETVSSTLRYGFLLLMKHPDVEAKVHEEIDRVIGRNRQPQYEDHMKMPYTQAVINEIQRFSNFAPLGIPRRITKNTSFRGFFLPKATEVFPILGSLMTDPKFFSSPKDF 409          
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: C521A_DICDI (Probable cytochrome P450 521A1 OS=Dictyostelium discoideum GN=cyp521a1 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.022e-13
Identity = 66/223 (29.60%), Postives = 102/223 (45.74%), Query Frame = 3
Query:   15 GKKYTNEIVARHEFKEMADELFILGGVLDIGDMIPWLGFLD----------LQGYIKRM-KVLAKKFDRLFEYELDDHNARRKGVDNYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQDLLAGGTESSAVTVEWAISELMKKPKLLKKATEELDRVV---GKERWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVW 641
            G K   EI+   EF E  +E++ L     IG M    G LD          L+ + +R  K   K+ + LF+     ++     +D    KD+MDV++   D        E+  +  +  DLL G  ++    V W    ++    +  K  +E+ +V+   G++  V  +DI  LP+ID I+KE  R+HP  P  VPR A  D  + GY IPKG  V  N +
Sbjct:  177 GTKVITEIIFGREFSE--NEVYSL-----IGPMNKLFGILDTPFPSESISFLKPFYRRSYKECDKQCEELFKLVEKVYDDHLLNLDKDNPKDVMDVMIVETDFK------EKDHVICICCDLLMGTKDTFNTIVLWFFVLMINYQDVQLKGYQEIIKVLECTGRDH-VTIEDIDKLPYIDGIIKEISRIHPAGPLSVPRTAINDIMINGYFIPKGCHVFQNTY 385          
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: C515B_DICDI (Probable cytochrome P450 515B1 OS=Dictyostelium discoideum GN=cyp515b1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.022e-13
Identity = 53/194 (27.32%), Postives = 95/194 (48.97%), Query Frame = 3
Query:  153 KRMKVLAKKFDRLFEYELDDHNARRKGVDNYEAKDMMDVL-LQLADDPTLEVKLERHSLKAVTQDLLAGGTESSAVTVEWAISELMKKPKLLKK---------------ATEELDRVVGKERWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPAFVGNPNEF 686
            K++K +  +  +  +  +D    + + +D    K  +D L LQ+  DP+  +K++  +++ +  DLL GGT+S++  +EW I  L     + +K                T E D      + +E+    N P  +A VKET+R  P  P  +P + SED ++ GY IPKGT+++ N+++         +P EF
Sbjct:  230 KKLKEICDRMSKFIKPRVDK---KVELLDQDNPKCFIDYLILQIRSDPSQTIKID--AIQYIVLDLLVGGTDSTSSALEWMILFLSNHESIQEKLYNEICKNTNTNTTATTTENDNESYFPKLIEKN---NYPLFNACVKETLRRSPPVPLGLPHLCSEDTEIGGYLIPKGTQIISNIYSASNCDKVFTDPLEF 415          
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: CP2K4_ONCMY (Cytochrome P450 2K4 OS=Oncorhynchus mykiss GN=cyp2k4 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.334e-13
Identity = 53/197 (26.90%), Postives = 92/197 (46.70%), Query Frame = 3
Query:  108 DMIPWLGFLDLQGYIKRMKVLAKKFDRLFEYELDDHNARRKGVDNYEAKDMMDVLL----QLADDPTLEVKLERHSLKAVTQDLLAGGTESSAVTVEWAISELMKKPKLLKKATEELDRVVGKERWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPAFVGNPNEF 686
            +M PWLG      +I  +  L K    L    ++     ++ ++ +  +  +D  L     L +   ++      +L     +L   GT+++  T+ W +  + K P +  +  EE+ RV+G  + + E D  NLP+ DA++ ET RL  +SP  VP   S D    GY I KGT V+  + ++ +D     +PN F
Sbjct:  229 NMFPWLG-----PWINNLTRLKKNVADLKMEVIELVRGLKETLNPHMCRGFVDSFLVRKQTLEESGKMDSFYHDDNLLFSIGNLFGAGTDTTGTTLRWGLLLMAKYPHIQDQVQEEISRVIGSRQTLVE-DRKNLPYTDAVIHETQRLANISPMAVPHTTSRDVTFQGYFIKKGTSVIPLLMSVLQDDNEWESPNTF 419          
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: CP2K1_ONCMY (Cytochrome P450 2K1 OS=Oncorhynchus mykiss GN=cyp2k1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.334e-13
Identity = 56/198 (28.28%), Postives = 94/198 (47.47%), Query Frame = 3
Query:  108 DMIPWLG-----FLDLQGYIKRMKVLAKKFDRLFEYELDDHNARRKGVDNYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQDLLAGGTESSAVTVEWAISELMKKPKLLKKATEELDRVVGKERWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPAFVGNPNEF 686
            +M PWLG        L+  I  MK+   +  R  +  L+ H  R   VD++  +        L +   ++      +L     +L + GT+++  T+ W +  + K P +  +  EE+ RV+G  + + E D  NLP+ DA++ ET RL  + P  VP   S D    GY I KGT V+  + ++ +D +   +PN F
Sbjct:  229 NMFPWLGPWINNLTRLKKNIADMKMEVIELVRGLKETLNPHMCRGF-VDSFLVRKQT-----LEESGHMDSFYHDDNLVFSVGNLFSAGTDTTGTTLRWGLLLMTKYPHIQDQVQEEISRVIGSRQTLVE-DRKNLPYTDAVIHETQRLANIVPMSVPHTTSRDVTFQGYFIKKGTSVIPLLTSVLQDDSEWESPNTF 419          
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: CP2H2_CHICK (Cytochrome P450 2H2 OS=Gallus gallus GN=CYP2H2 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.334e-13
Identity = 48/175 (27.43%), Postives = 82/175 (46.86%), Query Frame = 3
Query:  162 KVLAKKFDRLFEYELDDHNARRKGVDNYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQDLLAGGTESSAVTVEWAISELMKKPKLLKKATEELDRVVGKERWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPAFVGNPNEF 686
            K L K  + + ++  +   A ++  D    +D +D  +               SL   T DL   GT +++ T+ + +  L+K P++ +K  +E+DRVVG++R     D   LP+ DA++ E  R     P  +PR   +D K+  Y IPK T +   +  I +D     NP +F
Sbjct:  234 KTLIKSIETVDDFITEIIRAHQESFDASCPRDFIDAFINKMQQEKENSYFTVESLTRTTLDLFLAGTGTTSTTLRYGLLILLKHPEIEEKMHKEIDRVVGRDRSPCMADRSQLPYTDAVIHEIQRFIDFLPVNLPRAVIKDTKLRDYFIPKDTMIFPLLSPILQDCKEFPNPEKF 408          
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: CP2CL_CANFA (Cytochrome P450 2C21 (Fragment) OS=Canis familiaris GN=CYP2C21 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.334e-13
Identity = 47/183 (25.68%), Postives = 90/183 (49.18%), Query Frame = 3
Query:  165 VLAKKFDRLFEYELDDHNARRKGVDNYEAKDMMDVLLQLADDPTLEVKLERHSLKA---------VTQDLLAGGTESSAVTVEWAISELMKKPKLLKKATEELDRVVGKERWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPAFVGNPNEF 686
            VL K     F++  +      + ++    +D +D  L       ++++ E+H+ ++            D+ + GTE+++ T+ + +  L+K P +  K  EE+ RVVG+ R    +D   +P+ DA+V E  R   + P  +P   ++D K   Y IPKGT +L ++ ++  D     NP++F
Sbjct:  229 VLFKNIANQFKFISEKIKEHEESLNFSNPRDFIDYFL-------IKIEKEKHNKQSEFTMDNLIITIWDVFSAGTETTSTTLRYGLLVLLKHPDVTAKVQEEIHRVVGRHRSPCMQDRSCMPYTDAVVHEIQRYIDLVPNNLPHSVTQDIKFREYLIPKGTTILTSLTSVLHDEKGFPNPDQF 404          
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: CP27A_MOUSE (Sterol 26-hydroxylase, mitochondrial OS=Mus musculus GN=Cyp27a1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.334e-13
Identity = 35/115 (30.43%), Postives = 68/115 (59.13%), Query Frame = 3
Query:  342 DLLAGGTESSAVTVEWAISELMKKPKLLKKATEELDRVVGKERWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPAFVGNPNEF 686
            +LL  G ++++ T+ WA+  L K P++ +   +E+  VV   +  + KD  ++P + A++KET+RL+PV PT    +  ++ ++ G+  PK T+ ++  + + RDP+    PN F
Sbjct:  333 ELLLAGVDTTSNTLTWALYHLSKSPEIQEALHKEVTGVVPFGKVPQHKDFAHMPLLKAVIKETLRLYPVVPTNSRIITEKETEINGFLFPKNTQFVLCHYVVSRDPSVFPEPNSF 447          
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: CP2S1_MOUSE (Cytochrome P450 2S1 OS=Mus musculus GN=Cyp2s1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.743e-13
Identity = 51/150 (34.00%), Postives = 77/150 (51.33%), Query Frame = 3
Query:  249 AKDMMDVLL----QLADDPTLEVKLERHSLKAVTQDLLAGGTESSAVTVEWAISELMKKPKLLKKATEELDRVVGKERWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPAFVGNPNEF 686
            A+D++D  L    Q   DP  E   E++ L  VT  LL  GT +   T+ +A+  L++ P++ ++  EEL + +G  R     D V LP+ DA++ E  RL  + P  +P   +      GY +PKGT V   + +I  DPA   NP EF
Sbjct:  266 ARDVVDAFLLKMAQEKQDPGTEFT-EKNLLMTVTY-LLFAGTMTIGATIRYALLLLLRYPQVQQRVREELIQELGPGRAPSLSDRVRLPYTDAVLHEAQRLLALVPMGMPHTITRTTCFRGYTLPKGTEVFPLIGSILHDPAVFQNPGEF 413          
The following BLAST results are available for this feature:
BLAST of CX294592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 410
Match NameE-valueIdentityDescription
CP2DR_MESAU1.022e-1327.91Cytochrome P450 2D27 OS=Mesocricetus auratus GN=CY... [more]
CP2AC_MOUSE1.022e-1323.56Cytochrome P450 2A12 OS=Mus musculus GN=Cyp2a12 PE... [more]
C521A_DICDI1.022e-1329.60Probable cytochrome P450 521A1 OS=Dictyostelium di... [more]
C515B_DICDI1.022e-1327.32Probable cytochrome P450 515B1 OS=Dictyostelium di... [more]
CP2K4_ONCMY1.334e-1326.90Cytochrome P450 2K4 OS=Oncorhynchus mykiss GN=cyp2... [more]
CP2K1_ONCMY1.334e-1328.28Cytochrome P450 2K1 OS=Oncorhynchus mykiss GN=cyp2... [more]
CP2H2_CHICK1.334e-1327.43Cytochrome P450 2H2 OS=Gallus gallus GN=CYP2H2 PE=... [more]
CP2CL_CANFA1.334e-1325.68Cytochrome P450 2C21 (Fragment) OS=Canis familiari... [more]
CP27A_MOUSE1.334e-1330.43Sterol 26-hydroxylase, mitochondrial OS=Mus muscul... [more]
CP2S1_MOUSE1.743e-1334.00Cytochrome P450 2S1 OS=Mus musculus GN=Cyp2s1 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionC05054H01SK FlavRip1 Citrus clementina cDNA clone C05054H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294592 ID=CX294592; Name=CX294592; organism=Citrus clementina; type=EST; length=686bp
GCCGTATGGTTTTAGGGAAAAAATACACAAATGAGATTGTGGCACGACAT
GAGTTTAAGGAAATGGCCGATGAGTTGTTTATTTTAGGCGGGGTTTTGGA
TATTGGCGATATGATTCCTTGGTTAGGGTTCTTGGATTTACAAGGTTATA
TAAAGAGAATGAAGGTTTTGGCTAAGAAATTTGACAGGTTATTTGAGTAC
GAGTTGGATGATCATAACGCTAGAAGAAAGGGGGTCGATAATTATGAGGC
TAAAGACATGATGGATGTGCTTTTGCAGCTTGCTGATGATCCTACTCTTG
AAGTTAAACTTGAAAGACATAGCCTCAAAGCTGTAACCCAGGACCTACTA
GCTGGTGGGACTGAGAGCTCAGCAGTGACAGTGGAATGGGCTATCTCTGA
ACTAATGAAAAAACCAAAACTTCTCAAAAAAGCAACCGAAGAACTAGATA
GAGTAGTCGGAAAAGAAAGATGGGTTGAAGAGAAAGATATCGTTAATCTC
CCATTCATCGACGCCATAGTTAAAGAAACAATGCGTCTACACCCGGTGTC
TCCAACACTGGTGCCAAGAATGGCTAGTGAAGATTGCAAAGTTGCCGGCT
ACGACATCCCTAAAGGCACCCGAGTCCTAGTTAATGTATGGACGATAGGG
AGAGACCCTGCTTTTGTGGGAAATCCTAATGAATTT
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