CX294592

Overview
NameCX294592
Unique NameCX294592
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.586e-33
Identity = 70/225 (31.11%), Postives = 134/225 (59.56%), Query Frame = 3
Query:    3 RMVLGKKYTNEIVARHEFKEMADELFILGGVLDIGDMIPWLGFLD-LQGYIKRMKVLAKKFDRLFEYELDDHNARRKGVDNYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQDLLAGGTESSAVTVEWAISELMKKPKLLKKATEELDRVVGKE-RWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPAFVG 671
            R+ LG+K++ +  AR + K+   ++  L G   IG+ +P L ++D ++G+  ++K +++ F  L +  + +H          +  D +D+LL +  D     +++R+ +K +  D+  GGT +++  +EW ++EL++ PK +KK  +E+   +     +++EK++ N+ ++ A++KE +RLHP  P ++PR+ SED KV GY+I  GT V++N W I RD A  G
Sbjct:  186 RVALGRKHSEDETAR-DLKKRVRQIMELLGEFPIGEYVPILAWIDGIRGFNNKIKEVSRGFSDLMDKVVQEHLEASN-----DKADFVDILLSIEKDKNSGFQVQRNDIKFMILDMFIGGTSTTSTLLEWTMTELIRSPKSMKKLQDEIRSTIRPHGSYIKEKEVENMKYLKAVIKEVLRLHPSLPMILPRLLSEDVKVKGYNIAAGTEVIINAWAIQRDTAIWG 404          
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.411e-33
Identity = 79/234 (33.76%), Postives = 135/234 (57.69%), Query Frame = 3
Query:    3 RMVLGKKYTNEIVARHEFKEMADELFILGGVLDIGDMIPWLGFLD-LQGYIKRMKVLAKKFDRLFEYELDDHNARRKGVD---NYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQDLLAGGTESSAVTVEWAISELMKKPKLLKKATEELDRVVGKERWVEEKDIVNLPFIDAIVKETMRLHPVSPT-LVPRMASEDCKVAG-YDIPKGTRVLVNVWTIGRDPAFVGNPNEF 686
            R+ LG+ Y  +        E   EL    G+ ++GD IP L +++   G   ++K +AK+ D   E  +++H  R+K  +     EAKD +DVLL++ +    +  L+R SLKA+  D  A GT+++  T++W ++EL+++P+ LK   +E+  +   +  + E D+ N+ ++ A++KE++RLHP   + LVPR + ED  + G Y IP  T+ ++N W IGRDP    NP E+
Sbjct:  189 RVALGRTYDEKESGIEHIIEQFVELL---GIFNVGDYIPRLEWVNKFTGLDAKVKKVAKELDMFLEIVIEEHIIRKKKEEYTSTGEAKDFVDVLLEIQNGNETDFPLQRDSLKAILLDSFAAGTDTTFATLDWTMAELLRQPRALKTLQDEVRGLAQGKSEITEDDLKNMQYLRAVIKESLRLHPTQESLLVPRESMEDVNLLGYYHIPARTQAIINAWAIGRDPLSWENPEEY 419          
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.524e-33
Identity = 81/235 (34.47%), Postives = 135/235 (57.45%), Query Frame = 3
Query:    3 RMVLGKKYTN---EIVAR-HEFKEMADELFILGGVLDIGDMI---PWLGFLDLQGYIKRMKVLAKKFDRLFEYELDDHNARRKGVDNYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQDLLAGGTESSAVTVEWAISELMKKPKLLKKATEELDRVVGKERWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPAFVGNPNEF 686
            R+  GK++ N   +I  +  EFK + +    +G  L + + I    WL  L+ + Y    K   ++ DRL    +++H    K  ++   +  +D L  L      +  L   ++  +  D++  G +++ ++VEWA++EL++ P++ KK  EELDRVVG++R + E D  NLP++ A+VKE++RLHP +P ++P  AS + K+ GYDIPKG  V+VNVW + RDP    NP E+
Sbjct:  188 RLAFGKRFMNANGDIDEQGREFKTIVNNGIKIGASLSVAEFIWYLRWLCPLNEELY----KTHNERRDRLTMKIIEEHAKSLK--ESGAKQHFVDALFTLKQ----QYDLSEDTVIGLLWDMITAGMDTTVISVEWAMAELVRNPRVQKKLQEELDRVVGRDRVMLETDFQNLPYLQAVVKESLRLHPPTPLMLPHKASTNVKIGGYDIPKGANVMVNVWAVARDPKVWSNPLEY 412          
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 9.826e-33
Identity = 77/227 (33.92%), Postives = 125/227 (55.07%), Query Frame = 3
Query:   51 EFKEMADELFILGGVLDIGDMIPWLGFLDLQGYIKRMKVLAKKFDRLFEYELDDHNARRKGVDNYEAKDMMDV---------------LLQLADDPTLEVKLERHSLKAVTQDLLAGGTESSAVTVEWAISELMKKPKLLKKATEELDRVVGKERWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPAFVGNPNEF 686
            EF  +  E   L G  ++ D IP+ G++D QG  KR+       D   +  +D+H  +++  +  +  D++D                L+    D    +KL R ++KA+  D++ GGTE+ A  +EWA++EL++ P+ LK+  +EL  VVG +R VEE DI  L ++   +KET+R+HP  P L+   A ED  + G+ IPK +RV++N + IGRDP    +P+ F
Sbjct:  203 EFIRILQEFSKLFGAFNVADFIPYFGWIDPQGINKRLVKARNDLDGFIDDIIDEHMKKKENQNAVDDGDVVDTDMVDDLLAFYSEEAKLVSETADLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWALTELLRSPEDLKRVQQELAEVVGLDRRVEESDIEKLTYLKCTLKETLRMHPPIPLLLHETA-EDTSIDGFFIPKKSRVMINAFAIGRDPTSWTDPDTF 428          
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.676e-32
Identity = 71/184 (38.59%), Postives = 109/184 (59.24%), Query Frame = 3
Query:  138 LQGYIKRMKVLAKKFDRLFEYELDDHNARRKGVDNYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQDLLAGGTESSAVTVEWAISELMKKPKLLKKATEELDRVVGKER-WVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPAFVGNPNEF 686
            L G++ R + +  + D  FE  +D H    + V +    D++DVL+ L  +    ++  R  +KA+  D   G  ++S+VT+ WA+SELM+KP++L+KA  E+   VG ++  V  +D   +P++  +VKET+RLHP +  LVPR    D  + GYD+P  TRV VN W IGRDPA    P+EF
Sbjct:  257 LSGFLARRERIFNELDVFFEKVIDQHMDPARPVPD-NGGDLVDVLINLCKEHDGTLRFTRDHVKAIVLDTFIGAIDTSSVTILWAMSELMRKPQVLRKAQAEVRAAVGDDKPRVNSEDAAKIPYLKMVVKETLRLHPPATLLVPRETMRDTTICGYDVPANTRVFVNAWAIGRDPASWPAPDEF 439          
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.086e-31
Identity = 76/218 (34.86%), Postives = 128/218 (58.72%), Query Frame = 3
Query:   51 EFKEMADELFILGGVLDIGDMIPWLGFLDLQGYIK-RMKVLAKKFDRLFEYELDDHNARRKGV-----DNYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQDLLAGGTESSAVTVEWAISELMKKPKLLKKATEELDRVVGKERWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPAFVGNPNEF 686
            EF  +  +   + G  ++ DM P L  L L    K +++ + ++ D++ E  L  H  +R  V        E +D++DVLL+L +  +LEV +   ++KAV  ++ A GT++SA T+EWA+SE+MK PK+ +KA  EL ++   +  + E D+  L ++ +++KET+RLHP S  L+PR       + GY+IP  T+V++N W IGRDP +  + + F
Sbjct:  199 EFMSLVRKAITMTGGFEVDDMFPSLKPLHLLTRQKAKVEHVHQRADKILEDILRKHMEKRTRVKEGNGSEAEQEDLVDVLLRLKESGSLEVPMTMENIKAVIWNIFAAGTDTSASTLEWAMSEMMKNPKVKEKAQAELRQIFKGKEIIRETDLEELSYLKSVIKETLRLHPPS-QLIPRECIISTNIDGYEIPIKTKVMINTWAIGRDPQYWSDADRF 415          
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.419e-31
Identity = 73/209 (34.93%), Postives = 124/209 (59.33%), Query Frame = 3
Query:   54 FKEMADELFILGGVLDIGDMIPWLGFLDLQGYIKRMKV-LAKKFDRLFEYELDDHN---ARRKGVDN-YEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQDLLAGGTESSAVTVEWAISELMKKPKLLKKATEELDRVVGKERWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPAF 665
            F ++  E+  L    D+ D+ P   FL + G  KR  + + +K D + E  +++H    A RK  D+    ++++DVLL+L +D +L+  +   ++KA+  D+ A GTE+S+ T  WA+ E++K P++L KA  E+      +   +E D+ +L ++  ++KETMRLH   P LVPR   ++ ++ GY IP  T+V+VNVW +GRDP +
Sbjct:  198 FIKLIREVIRLAEGFDVADIFPSYKFLHVFGRAKRKLLNVHRKVDAIVEDVINEHKKNFATRKNDDHALGGENLIDVLLKLMNDKSLQFPINNDNIKAIIIDMFAAGTETSSTTTVWAMVEMLKNPRVLAKAQAEVREAFRNKVTFDENDVEDLKYLKLVIKETMRLHAPIPLLVPRECRKETEINGYTIPVKTKVMVNVWALGRDPKY 406          
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.419e-31
Identity = 75/227 (33.04%), Postives = 127/227 (55.95%), Query Frame = 3
Query:   18 KKYTNEIVARHEFKEMADELFILGGVLDIGDMIPWLGFLDLQGYIKRMKVLAKKFDRLFEYELDDHNARRKGVDNYEAKDMMDVLLQLADDPT--LEVKLERHSLKAVTQDLLAGGTESSAVTVEWAISELMKKPKLLKKATEELDRVVG--KERWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPAFVGNPNEF 686
            K    E +    F+ +++  F          +  ++GF+   G  KR+  +  + D  F + +DDH++++   D     DM+D +L + D+       KL    LK V  ++   G ++SA+T+ WA++EL++ P+++KKA +E+   +G  +E  + E+D+  L ++  +VKET+RLHP +P L+PR    D K+ GYDIP+   +LVN W+IGRDP    NP EF
Sbjct:  196 KHVDQESIKELMFESLSNMTFRFSDFFPTAGLKWFIGFVS--GQHKRLYNVFNRVDTFFNHIVDDHHSKKATQDR---PDMVDAILDMIDNEQQYASFKLTVDHLKGVLSNIYHAGIDTSAITLIWAMAELVRNPRVMKKAQDEIRTCIGIKQEGRIMEEDLDKLQYLKLVVKETLRLHPAAPLLLPRETMADIKIQGYDIPQKRALLVNAWSIGRDPESWKNPEEF 417          
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.419e-31
Identity = 81/227 (35.68%), Postives = 128/227 (56.39%), Query Frame = 3
Query:   45 RHEFKEMADELFI---LGGVLDIGDMIP----WLGFLD-LQGYIKRMKVLAKKFDRLFEYELDDHNARRKGVDNYEAKDMMDVLLQLA--DDPTLEVKLERHSLKAVTQDLLAGGTESSAVTVEWAISELMKKPKLLKKATEELDRVVG---KERWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPAFVGNPNEF 686
            +H  KE  +EL       G L   D+ P    W  F+D + G  K +  +  + D L  + +D H    +   N +  D++D +L+     +     KL    LK + Q++   G ++SA+T+ WA++EL+K P+++KKA EE+   +G   KER +EE+D+  L ++  ++KET+RLHP +P L+PR    D K+ GYDIP+ T +LVN W+IGR+P    NP EF
Sbjct:  193 KHVNKEKIEELMFEVQKVGSLSSSDIFPAGVGW--FMDFVSGRHKTLHKVFVEVDTLLNHVIDGHLKNPEDKTNQDRPDIIDSILETIYKQEQDESFKLTIDHLKGIIQNIYLAGVDTSAITMIWAMAELVKNPRVMKKAQEEIRTCIGIKQKER-IEEEDVDKLQYLKLVIKETLRLHPPAPLLLPRETMADIKIQGYDIPRKTILLVNAWSIGRNPELWENPEEF 416          
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.853e-31
Identity = 69/225 (30.67%), Postives = 128/225 (56.89%), Query Frame = 3
Query:   18 KKYTNEIVARHEFKEMADELFILGGVLDIGDMIPWLGFLDLQGYIKRMKVLAKKFDRLFEYELDDHNARRKGVDNYE-AKDMMDVLLQLADDPTLEVKLERHSLKAVTQDLLAGGTESSAVTVEWAISELMKKPKLLKKATEELDRVVG-KERWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPAFVGNPNEF 686
            K ++ E +    F+      F    +  I  +  ++GF+   G  K +  +  + D    + +DDH  + +  D  +    ++D++     D + ++ ++   LK +TQD+   G ++SA+T+ WA++EL+  P+++KK  +E+   +G K+  +EE+D+  L ++  ++KET+RLHP +P L+PR    D K+ GYDIP+ T +LV+ W++GRDP +  NP EF
Sbjct:  196 KHFSEEKIEELVFEAQKSLTFKFSDLFPIPGLGWFIGFVS--GQHKGLHKVFIEVDNFLNHMIDDHQKQNQPQDRSDIVGSLLDMIHNQEQDKSFKLTIDH--LKGITQDIFLAGIDTSAITMIWAMAELVNNPRVMKKVQDEIRSCIGIKKERIEEEDVGKLQYLKLVIKETLRLHPAAPLLLPRETMADIKIQGYDIPRKTLLLVSAWSLGRDPKYWKNPEEF 416          
The following BLAST results are available for this feature:
BLAST of CX294592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 410
Match NameE-valueIdentityDescription
C71AD_ARATH2.586e-3331.11Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C71A2_SOLME4.411e-3333.76Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C98A1_SORBI7.524e-3334.47Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C84A1_ARATH9.826e-3333.92Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C71E1_SORBI1.676e-3238.594-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71D8_SOYBN1.086e-3134.86Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71D6_SOLCH1.419e-3134.93Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C71B4_ARATH1.419e-3133.04Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71B3_ARATH1.419e-3135.68Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C71BP_ARATH1.853e-3130.67Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05054H01SK FlavRip1 Citrus clementina cDNA clone C05054H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294592 ID=CX294592; Name=CX294592; organism=Citrus clementina; type=EST; length=686bp
GCCGTATGGTTTTAGGGAAAAAATACACAAATGAGATTGTGGCACGACAT
GAGTTTAAGGAAATGGCCGATGAGTTGTTTATTTTAGGCGGGGTTTTGGA
TATTGGCGATATGATTCCTTGGTTAGGGTTCTTGGATTTACAAGGTTATA
TAAAGAGAATGAAGGTTTTGGCTAAGAAATTTGACAGGTTATTTGAGTAC
GAGTTGGATGATCATAACGCTAGAAGAAAGGGGGTCGATAATTATGAGGC
TAAAGACATGATGGATGTGCTTTTGCAGCTTGCTGATGATCCTACTCTTG
AAGTTAAACTTGAAAGACATAGCCTCAAAGCTGTAACCCAGGACCTACTA
GCTGGTGGGACTGAGAGCTCAGCAGTGACAGTGGAATGGGCTATCTCTGA
ACTAATGAAAAAACCAAAACTTCTCAAAAAAGCAACCGAAGAACTAGATA
GAGTAGTCGGAAAAGAAAGATGGGTTGAAGAGAAAGATATCGTTAATCTC
CCATTCATCGACGCCATAGTTAAAGAAACAATGCGTCTACACCCGGTGTC
TCCAACACTGGTGCCAAGAATGGCTAGTGAAGATTGCAAAGTTGCCGGCT
ACGACATCCCTAAAGGCACCCGAGTCCTAGTTAATGTATGGACGATAGGG
AGAGACCCTGCTTTTGTGGGAAATCCTAATGAATTT
back to top