CX294592

Overview
NameCX294592
Unique NameCX294592
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.676e-30
Identity = 76/220 (34.55%), Postives = 126/220 (57.27%), Query Frame = 3
Query:    3 RMVLGKKYTNEIVARHEFKEMADELFILGGVLDIGDMIPWLGFLD-LQGYIKRMKVLAKKFDRLFEYELDDHNARRKGVDNYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQDLLAGGTESSAVTVEWAISELMKKPKLLKKATEELDRVVGKE-RWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRD 656
            R+ LG+KY+ E  +  +FK    ++  L G   +G+ IP L ++D L+G  ++ + ++K F  L E  L +H        +    D +DVLL L       V++ R  +K +  D+   GTE++   +EW ++EL++ P+ +KK  +E+     K   ++ E+D+ ++ ++ A+VKE +RLHP  P LVPR  SED K+ GYDI  GT+V++N W I RD
Sbjct:  186 RVSLGRKYSKE-ESMSDFKIQMRKITELVGGFPVGEYIPCLAWIDKLRGVDEKAEEVSKAFGDLMEKVLQEH----LDATDKPTLDFVDVLLSLERHERNGVQIRRSDIKFLILDMFLAGTETTYALLEWIMTELIRHPECMKKLQDEIRAKATKLILYISEEDVEDMKYLKAVVKEVLRLHPPLPLLVPRELSEDIKLKGYDIAAGTQVIINAWAIQRD 400          
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.495e-30
Identity = 75/235 (31.91%), Postives = 129/235 (54.89%), Query Frame = 3
Query:    3 RMVLGKKY-TNEIVARHEFKEMADELFILGGVLDIGDMIP--WLGFLD--LQGYIKRMKVLAKKFDRLFEYELDDHNARRKGVDNYEAKD-MMDVLLQLADDPTLEVKLERHSLKAVTQDLLAGGTESSAVTVEWAISELMKKPKLLKKATEEL-DRVVGKERWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPAFVGNPNEF 686
            R+  G+ +  +E     +  E+  E     G     D  P   LG+L   + G  KR+  +  K D L ++ +DDH+   +  D+ +  D M+DV+ +   D +L + ++   +K +  +++  G ++ A+T+ W ++EL + P+++KK   E+ DR+      + ++D+  +PF++ ++KET RLHPV+P L+PR      KV GYDIP   R+LVN W IGRDP    +P EF
Sbjct:  183 RVAFGQSFHESEFTDTDKIDELVFETETAQGSFTCSDFFPIAGLGWLVDWISGQHKRLNDVFLKLDALLQHVIDDHSNPGRSKDHKDIVDVMLDVMHKQGKDDSLRLTIDH--IKGLLTNIIIAGIDTGALTMIWTMTELARNPEIMKKVQGEIRDRLGNNRERITKEDLDKVPFLNLVIKETFRLHPVAPLLLPRETMAHVKVQGYDIPPKRRILVNAWAIGRDPKLWTDPEEF 415          
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.564e-30
Identity = 79/221 (35.75%), Postives = 117/221 (52.94%), Query Frame = 3
Query:   51 EFKEMADE---------LFILGGVLDIGDMIPWLGFLDLQGYIKRMKVLAKKFDRLFEYELDDHNARRKGVDNYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQDLLAGGTESSAVTVEWAISELMKKPKLLKKATEELDRVVGKERWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPAFVGNPNEF 686
            E+ + +DE         + + GG  D+    P L   DL G  ++M    K   +++E E+    A R    N E KDM+DVL+  A+D         H + A+  +    G+++++  +EWA+++L+K P  L K  EELDRVVG+   V+E     LP++ A VKETMRL+P    ++P    E C+V GY IPKG  V VN   IGRDP    +P +F
Sbjct:  192 EYSDQSDEVGMDKLIHGMLMTGGDFDVASYFPVLARFDLHGLKRKMDEQFKLLIKIWEGEVLARRANR----NPEPKDMLDVLI--AND------FNEHQINAMFMETFGPGSDTNSNIIEWALAQLIKNPDKLAKLREELDRVVGRSSTVKESHFSELPYLQACVKETMRLYPPISIMIPHRCMETCQVMGYTIPKGMDVHVNAHAIGRDPKDWKDPLKF 400          
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.564e-30
Identity = 66/212 (31.13%), Postives = 121/212 (57.08%), Query Frame = 3
Query:   60 EMADELFILGGVLDIGDMIP--WL-GFLDLQGYIKRMKVLAKKFDRLFEYELDDHNARRKGVDNYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQDLLAGGTESSAVTVEWAISELMKKPKLLKKATEELDRVVGKERWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPAFVGNPNEF 686
            E+  E   L    ++ D+ P  WL   L L  Y  R++ + ++ D + +  L++H  ++ G   +  +D++DVL ++     +++ +  + +K    D  + G E+S+ T+ WA+SELM+ P  + K   E+   +  +  V+  ++  L ++ +++KET+RLHP  P L+PR + E+C+V GY IP  TR+ +NVW IGRDP +  +P+ F
Sbjct:  201 ELVKESLALASGFELADLYPSSWLLNLLSLNKY--RLQRMRRRLDHILDGFLEEHREKKSG--EFGGEDIVDVLFRMQKGSDIKIPITSNCIKGFIFDTFSAGAETSSTTISWALSELMRNPAKMAKVQAEVREALKGKTVVDLSEVQELKYLRSVLKETLRLHPPFP-LIPRQSREECEVNGYTIPAKTRIFINVWAIGRDPQYWEDPDTF 407          
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.564e-30
Identity = 66/212 (31.13%), Postives = 121/212 (57.08%), Query Frame = 3
Query:   60 EMADELFILGGVLDIGDMIP--WL-GFLDLQGYIKRMKVLAKKFDRLFEYELDDHNARRKGVDNYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQDLLAGGTESSAVTVEWAISELMKKPKLLKKATEELDRVVGKERWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPAFVGNPNEF 686
            E+  E   L    ++ D+ P  WL   L L  Y  R++ + ++ D + +  L++H  ++ G   +  +D++DVL ++     +++ +  + +K    D  + G E+S+ T+ WA+SELM+ P  + K   E+   +  +  V+  ++  L ++ +++KET+RLHP  P L+PR + E+C+V GY IP  TR+ +NVW IGRDP +  +P+ F
Sbjct:  201 ELVKESLALASGFELADLYPSSWLLNLLSLNKY--RLQRMRRRLDHILDGFLEEHREKKSG--EFGGEDIVDVLFRMQKGSDIKIPITSNCIKGFIFDTFSAGAETSSTTISWALSELMRNPAKMAKVQAEVREALKGKTVVDLSEVQELKYLRSVLKETLRLHPPFP-LIPRQSREECEVNGYTIPAKTRIFINVWAIGRDPQYWEDPDTF 407          
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.564e-30
Identity = 83/226 (36.73%), Postives = 126/226 (55.75%), Query Frame = 3
Query:   21 KYTNEIVARHEFKEMADELFILGGVLDIGDMIPWLGFLDLQGYIKRMKV--LAKKFDRLFEYELDDHNARRKG-VDNYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQDLLAGGTESSAVTVEWAISELMKKPKLLKKATEELDR-VVGKERWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPAFVGNPNEF 686
            K++ E      F+E+ D    L G   I D  P LG ++L   +   K   + K++D L +  +DDH AR     D  + KD + VLL L      E  L R  +KA+  D+   GT++S +T+E+A++EL++KP L+KK  EE+ R V   +  V E ++  +  + A++KET+RLHP  P L+P  + + C+VAGY IP  TRV+VN W +GR   +    NEF
Sbjct:  227 KFSMEEGRNRLFRELTDINAGLLGGFHIQDYFPRLGRIELVRKVACAKTRRVRKRWDDLLDKLIDDHAARMATHQDEDDDKDFIYVLLSLQK----EYGLTRDHIKAILIDMFEAGTDTSYMTLEFAMTELIRKPHLMKKLQEEVRRNVPAGQEMVTEDNLPGMTDLKAVIKETLRLHPPVPLLLPHYSLDACEVAGYTIPANTRVVVNAWALGRHSGYWERENEF 448          
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 4.564e-30
Identity = 71/226 (31.42%), Postives = 130/226 (57.52%), Query Frame = 3
Query:    3 RMVLGKKYTNEIVARHEFKEMADELFILGGVLDIGDMIPWLGFLD-LQGYIKRMKVLAKKFDRLFEYELDDHNARRKGVDNYEAK-DMMDVLLQLADDPTLEVKLERHSLKAVTQDLLAGGTESSAVTVEWAISELMKKPKLLKKATEELDRVVGKE-RWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPAFVG 671
            R+ LGKKY  +  A    K+   ++  L     IGD +P L ++D + G+  ++  +++ +  L E  + +H      ++  E K D +++LL +  +     K++R+ +K +  D+  GG  +S+  +EW ++EL++ P+ +KK   E+   +     +++EK++ N+ ++ A++KE  R+HP  P ++PR+ +ED KV GYDI  GT VL+N W+I RDPA  G
Sbjct:  186 RVSLGKKYWEDETAGG-LKKRVRQIMELLREFPIGDYVPALAWIDRINGFNSKIVEVSRAYSDLMEKVVQEH------LEAGEHKADFVNILLSIEKEKNNGFKVQRNDIKFMILDMFIGGISTSSTLLEWIMTELIRNPECMKKLQNEIRSTIRPHGSYIKEKEVENMRYLKAVIKEVFRVHPPLPLILPRLLTEDVKVKGYDIAAGTEVLINAWSIHRDPAIWG 404          
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.961e-30
Identity = 80/233 (34.33%), Postives = 126/233 (54.08%), Query Frame = 3
Query:    3 RMVLGKKYTNEIVARHEFKEMADELFILGGVLDIGDMIPWLGFLDL-QGYIKRMKVLAKKFDRLFEYELDDHNARRKGVDNYEAKD-MMDVLLQLADDPTLEVK--LERHSLKAVTQDLLAGGTESSAVTVEWAISELMKKPKLLKKATEELDRVV-GKERWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPAFVGNPNEF 686
            R  LGK   +EI++      + D   + G     GD+ P L F+D+  G  +R+    ++ D +F+  L +  AR++  +     D  + VLL++ DD        +   S+KA+  D+LAGGTE+++   EW +SELM+KP+ + KA  E+   + GK     E  +  L +   +VKE +RLHPV P L+PR   E C V G+++ KGT+V+VN W + R P    +P EF
Sbjct:  191 RATLGKLCGDEIMS------VVDVAVLYGSGFCAGDLFPSLWFVDVVTGLTRRLWTARRRLDAIFDRILAECEARQRQEEKMTGDDGFLGVLLRIRDDDGEPETGGISTTSIKAILFDMLAGGTETTSSAAEWIMSELMRKPEAMAKAQAEVRGALDGKSPEDHEGQMDKLSYTRMVVKEGLRLHPVLPLLLPRSCQETCDVGGFEVTKGTKVIVNAWALARSPERWHDPEEF 417          
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.961e-30
Identity = 65/213 (30.52%), Postives = 123/213 (57.75%), Query Frame = 3
Query:   51 EFKEMADELFILGGVLDIGDMIPWLGFLDLQGYIK-RMKVLAKKFDRLFEYELDDHNARRKGVDNYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQDLLAGGTESSAVTVEWAISELMKKPKLLKKATEELDRVVGKERWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPAFVGNPNEF 686
            E  E+  +   +    ++ D+ P    L+L  + K ++  + ++ D + E  +D+H  ++ G   +  +D++DVL ++  D  ++V +  +++KA   D  + GTE+S+ T  W ++ELM+ P ++ KA  E+   +  +  V+  D+  L ++ ++VKETMR+HP  P L+PR   E+C+V GY IP   R+++NVW++GR+P +   P  F
Sbjct:  198 ELVELVKDSLSMASGFELADLFPSSKLLNLLCWNKSKLWRMRRRVDTILEAIVDEHKLKKSG--EFGGEDIIDVLFRMQKDSQIKVPITTNAIKAFIFDTFSAGTETSSTTTLWVMAELMRNPAVMAKAQAEVRAALKGKTSVDVDDVQELKYMKSVVKETMRMHPPIP-LIPRSCREECEVNGYKIPNKARIMINVWSMGRNPLYWEKPETF 407          
BLAST of CX294592 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.961e-30
Identity = 67/214 (31.31%), Postives = 125/214 (58.41%), Query Frame = 3
Query:   51 EFKEMADELFILGGVLDIGDMIPWLGFLDLQGYIK-RMKVLAKKFDRLFEYELDDHNARRKGVDNYEAKDMMDVLLQLADDPTLEVKLERHSLKAVTQDLLAGGTESSAVTVEWAISELMKKPKLLKKATEELDRVV-GKERWVEEKDIVNLPFIDAIVKETMRLHPVSPTLVPRMASEDCKVAGYDIPKGTRVLVNVWTIGRDPAFVGNPNEF 686
            E  E+  +   +    ++ DM P    L+L  + K ++  + ++ D + E  +++H  ++ G   +  +D++DVL ++  D  ++V +  +++KA   D  + GTE+S+ T  W ++ELM+ P+++ KA  E+   + GK  W +  D+  L ++ ++VKETMR+HP  P L+PR   E+C+V GY IP   R+++NVW++GR+P +   P  F
Sbjct:  201 ELVELVKDALSMASGFELADMFPSSKLLNLLCWNKSKLWRMRRRVDAILEAIVEEHKLKKSG--EFGGEDIIDVLFRMQKDSQIKVPITTNAIKAFIFDTFSAGTETSSTTTLWVMAELMRNPEVMAKAQAEVRAALKGKTDW-DVDDVQELKYMKSVVKETMRMHPPIP-LIPRSCREECEVNGYTIPNKARIMINVWSMGRNPLYWEKPETF 410          
The following BLAST results are available for this feature:
BLAST of CX294592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 410
Match NameE-valueIdentityDescription
C71AE_ARATH2.676e-3034.55Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C71BH_ARATH3.495e-3031.91Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C80A1_BERST4.564e-3035.75Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C71DI_MENSP4.564e-3031.13Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]
C71DI_MENGR4.564e-3031.13Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]
C71C4_MAIZE4.564e-3036.73Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C71AI_ARATH4.564e-3031.42Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C99A1_SORBI5.961e-3034.33Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C7D95_MENSP5.961e-3030.52Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C71DD_MENPI5.961e-3031.31Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05054H01SK FlavRip1 Citrus clementina cDNA clone C05054H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294592 ID=CX294592; Name=CX294592; organism=Citrus clementina; type=EST; length=686bp
GCCGTATGGTTTTAGGGAAAAAATACACAAATGAGATTGTGGCACGACAT
GAGTTTAAGGAAATGGCCGATGAGTTGTTTATTTTAGGCGGGGTTTTGGA
TATTGGCGATATGATTCCTTGGTTAGGGTTCTTGGATTTACAAGGTTATA
TAAAGAGAATGAAGGTTTTGGCTAAGAAATTTGACAGGTTATTTGAGTAC
GAGTTGGATGATCATAACGCTAGAAGAAAGGGGGTCGATAATTATGAGGC
TAAAGACATGATGGATGTGCTTTTGCAGCTTGCTGATGATCCTACTCTTG
AAGTTAAACTTGAAAGACATAGCCTCAAAGCTGTAACCCAGGACCTACTA
GCTGGTGGGACTGAGAGCTCAGCAGTGACAGTGGAATGGGCTATCTCTGA
ACTAATGAAAAAACCAAAACTTCTCAAAAAAGCAACCGAAGAACTAGATA
GAGTAGTCGGAAAAGAAAGATGGGTTGAAGAGAAAGATATCGTTAATCTC
CCATTCATCGACGCCATAGTTAAAGAAACAATGCGTCTACACCCGGTGTC
TCCAACACTGGTGCCAAGAATGGCTAGTGAAGATTGCAAAGTTGCCGGCT
ACGACATCCCTAAAGGCACCCGAGTCCTAGTTAATGTATGGACGATAGGG
AGAGACCCTGCTTTTGTGGGAAATCCTAATGAATTT
back to top