CX294609

Overview
NameCX294609
Unique NameCX294609
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length593
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294609 vs. ExPASy Swiss-Prot
Match: WRK24_ARATH (Probable WRKY transcription factor 24 OS=Arabidopsis thaliana GN=WRKY24 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.314e-13
Identity = 32/58 (55.17%), Postives = 42/58 (72.41%), Query Frame = 3
Query:  153 DDGYNWRKYGQKQVKGSENPRSYYKCTFPSCPTKKKVER-SLDGQITEIVYKGSHNHP 323
            DDGY WRKYGQK VK + +PRSYY+CT+ +C  KK+V+R + D  +    Y+G HNHP
Sbjct:   98 DDGYRWRKYGQKSVKHNAHPRSYYRCTYHTCNVKKQVQRLAKDPNVVVTTYEGVHNHP 155          
BLAST of CX294609 vs. ExPASy Swiss-Prot
Match: WRK43_ARATH (Probable WRKY transcription factor 43 OS=Arabidopsis thaliana GN=WRKY43 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.716e-13
Identity = 35/58 (60.34%), Postives = 40/58 (68.97%), Query Frame = 3
Query:  153 DDGYNWRKYGQKQVKGSENPRSYYKCTFPSCPTKKKVER-SLDGQITEIVYKGSHNHP 323
            DDGY WRKYGQK VK S  PRSYY+CT   C  KK+V+R S +  I E  Y+G HNHP
Sbjct:   30 DDGYRWRKYGQKSVKNSLYPRSYYRCTQHMCNVKKQVQRLSKETSIVETTYEGIHNHP 87          
BLAST of CX294609 vs. ExPASy Swiss-Prot
Match: WRKY8_ARATH (Probable WRKY transcription factor 8 OS=Arabidopsis thaliana GN=WRKY8 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.241e-13
Identity = 34/60 (56.67%), Postives = 39/60 (65.00%), Query Frame = 3
Query:  153 DDGYNWRKYGQKQVKGSENPRSYYKCTFPSCPTKKKVERSL-DGQITEIVYKGSHNHPKP 329
            +DGY WRKYGQK VK S  PRSYY+CT   C  KK+VERS  D  +    Y+  HNHP P
Sbjct:  183 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSYQDPTVVITTYESQHNHPIP 242          
BLAST of CX294609 vs. ExPASy Swiss-Prot
Match: WRK75_ARATH (Probable WRKY transcription factor 75 OS=Arabidopsis thaliana GN=WRKY75 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.241e-13
Identity = 31/58 (53.45%), Postives = 43/58 (74.14%), Query Frame = 3
Query:  153 DDGYNWRKYGQKQVKGSENPRSYYKCTFPSCPTKKKVER-SLDGQITEIVYKGSHNHP 323
            DDGY WRKYGQK VK ++ PRSYY+CT+  C  KK+V+R ++D ++    Y+G H+HP
Sbjct:   67 DDGYRWRKYGQKAVKNNKFPRSYYRCTYGGCNVKKQVQRLTVDQEVVVTTYEGVHSHP 124          
BLAST of CX294609 vs. ExPASy Swiss-Prot
Match: WRK50_ARATH (Probable WRKY transcription factor 50 OS=Arabidopsis thaliana GN=WRKY50 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.241e-13
Identity = 33/57 (57.89%), Postives = 40/57 (70.18%), Query Frame = 3
Query:  153 DDGYNWRKYGQKQVKGSENPRSYYKCTFPSCPTKKKVERSLDGQITEI-VYKGSHNH 320
            DDG+ WRKYG+K VK S +PR+YYKC+   CP KK+VER  D     I  Y+GSHNH
Sbjct:  113 DDGFKWRKYGKKMVKNSPHPRNYYKCSVDGCPVKKRVERDRDDPSFVITTYEGSHNH 169          
BLAST of CX294609 vs. ExPASy Swiss-Prot
Match: WRK32_ARATH (Probable WRKY transcription factor 32 OS=Arabidopsis thaliana GN=WRKY32 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.241e-13
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 3
Query:  156 DGYNWRKYGQKQVKGSENPRSYYKCTFPSCPTKKKVERSLDG-QITEIVYKGSHNHPKP 329
            DGY WRKYGQK VKG+ +PR+YY+CT   CP +K +E +++  +   I YKG HNH  P
Sbjct:  332 DGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVENTKAVIITYKGVHNHDMP 390          

HSP 2 Score: 73.1738 bits (178), Expect = 1.112e-12
Identity = 35/59 (59.32%), Postives = 40/59 (67.80%), Query Frame = 3
Query:  156 DGYNWRKYGQKQVKGSENPRSYYKCTFPSCPTKKKVERSLD-GQITEIVYKGSHNHPKP 329
            DGYNWRKYGQKQVK  +  RSYY+CT+  C   KK+E S D G + EIV KG H H  P
Sbjct:  169 DGYNWRKYGQKQVKSPKGSRSYYRCTYTEC-CAKKIECSNDSGNVVEIVNKGLHTHEPP 226          
BLAST of CX294609 vs. ExPASy Swiss-Prot
Match: WRK59_ARATH (Probable WRKY transcription factor 59 OS=Arabidopsis thaliana GN=WRKY59 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 6.521e-13
Identity = 33/67 (49.25%), Postives = 40/67 (59.70%), Query Frame = 3
Query:  132 IRESKKSDDGYNWRKYGQKQVKGSENPRSYYKCTFPSCPTKKKVERSLDG-QITEIVYKGSHNHPKP 329
            I E    DDGY WRKYG+K + GS  PR Y+KC+ P C  KKK+ER  +        Y+G HNHP P
Sbjct:  102 IDEKVALDDGYKWRKYGKKPITGSPFPRHYHKCSSPDCNVKKKIERDTNNPDYILTTYEGRHNHPSP 168          
BLAST of CX294609 vs. ExPASy Swiss-Prot
Match: WRK12_ARATH (Probable WRKY transcription factor 12 OS=Arabidopsis thaliana GN=WRKY12 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.521e-13
Identity = 34/57 (59.65%), Postives = 41/57 (71.93%), Query Frame = 3
Query:  153 DDGYNWRKYGQKQVKGSENPRSYYKCTFPSCPTKKKVER-SLDGQITEIVYKGSHNH 320
            DDGY WRKYGQK VK S +PRSYY+CT  +C  KK+VER S D ++    Y+G HNH
Sbjct:  145 DDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNH 201          
BLAST of CX294609 vs. ExPASy Swiss-Prot
Match: WRKY9_ARATH (Probable WRKY transcription factor 9 OS=Arabidopsis thaliana GN=WRKY9 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.517e-13
Identity = 34/66 (51.52%), Postives = 44/66 (66.67%), Query Frame = 3
Query:  138 ESKKSDDGYNWRKYGQKQVKGSENPRSYYKCTF-PSCPTKKKVERSL-DGQITEIVYKGSHNHPKP 329
            E+   +DG  WRKYGQK  KG+  PR+YY+CT  P CP +K+V+R L D  I    Y+G+HNHP P
Sbjct:  230 ETATMNDGCQWRKYGQKTAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLP 295          
BLAST of CX294609 vs. ExPASy Swiss-Prot
Match: WRK23_ARATH (Probable WRKY transcription factor 23 OS=Arabidopsis thaliana GN=WRKY23 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.517e-13
Identity = 34/60 (56.67%), Postives = 38/60 (63.33%), Query Frame = 3
Query:  153 DDGYNWRKYGQKQVKGSENPRSYYKCTFPSCPTKKKVERSL-DGQITEIVYKGSHNHPKP 329
            +DGY WRKYGQK VK S  PRSYY+CT  SC  KK+VERS  D       Y+G H H  P
Sbjct:  174 EDGYRWRKYGQKAVKNSPFPRSYYRCTTASCNVKKRVERSFRDPSTVVTTYEGQHTHISP 233          
The following BLAST results are available for this feature:
BLAST of CX294609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
WRK24_ARATH1.314e-1355.17Probable WRKY transcription factor 24 OS=Arabidops... [more]
WRK43_ARATH1.716e-1360.34Probable WRKY transcription factor 43 OS=Arabidops... [more]
WRKY8_ARATH2.241e-1356.67Probable WRKY transcription factor 8 OS=Arabidopsi... [more]
WRK75_ARATH2.241e-1353.45Probable WRKY transcription factor 75 OS=Arabidops... [more]
WRK50_ARATH2.241e-1357.89Probable WRKY transcription factor 50 OS=Arabidops... [more]
WRK32_ARATH2.241e-1352.54Probable WRKY transcription factor 32 OS=Arabidops... [more]
WRK59_ARATH6.521e-1349.25Probable WRKY transcription factor 59 OS=Arabidops... [more]
WRK12_ARATH6.521e-1359.65Probable WRKY transcription factor 12 OS=Arabidops... [more]
WRKY9_ARATH8.517e-1351.52Probable WRKY transcription factor 9 OS=Arabidopsi... [more]
WRK23_ARATH8.517e-1356.67Probable WRKY transcription factor 23 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionC05055A10SK FlavSen1 Citrus clementina cDNA clone C05055A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294609 ID=CX294609; Name=CX294609; organism=Citrus clementina; type=EST; length=593bp
ATTATCAGGAATCCACAAAGCAAGATGTGAAATTGGCACAGAGTTTTTCA
ACAACTTTGCAAAGTAACAATCAGAGCAACAGTGGGTTCCAATCAGATTT
TGGAAACTACCAACACCAACAATCTCAGCCCATTAGAGAGAGTAAAAAAT
CTGATGATGGATATAATTGGAGAAAATATGGGCAAAAACAAGTCAAAGGA
AGTGAAAATCCAAGAAGTTATTACAAGTGCACATTCCCAAGTTGCCCAAC
AAAGAAGAAAGTTGAAAGGTCATTGGATGGGCAGATAACTGAGATTGTTT
ACAAGGGCAGTCACAATCATCCCAAGCCTCAATCTACAAGGAGATCATCG
TCATCCTCGGTTAATTCTAATGCCATCCAAGCATCTACTCAACATTCAAA
TGAAATACAAGATCAGTCATATGCTACACATGGAAGTGGACAGATGGATT
CAGCTGCAACCCCAGAGAATTCTTCGATATCGGTGGGAGATGATGACGTT
GATCAGGGTTCACAGAAGAGTAAATCAGGAGGAGGAGGAGCTGNAGGAGG
AGATGATTTTGATGAAGATGAACCTGAGGCCAAAAGATGGTAG
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