CX294717
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_LISW6 (10 kDa chaperonin OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=groS PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.108e-17 Identity = 42/91 (46.15%), Postives = 64/91 (70.33%), Query Frame = 2 Query: 254 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTV-GKAKLDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGI 523 +KPLGDRV++++ EEKT GI LP +A+ KPQ+G++VAVG G+ + K + V G VI++KY+GTE+ + G +LI+RE D++ I Sbjct: 2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLENGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAI 92
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_CHLT3 (10 kDa chaperonin OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=groS PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.108e-17 Identity = 43/93 (46.24%), Postives = 63/93 (67.74%), Query Frame = 2 Query: 251 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGIL 526 ++KPL DRV+VK EEKT GG+++P + + KPQ GEVVAVG GK + + V+ G +V+Y KY+GTE+ +G +LI+RE D+ I+ Sbjct: 2 NLKPLADRVIVKPSPAEEKTKGGLYIPDSGKEKPQHGEVVAVGPGKAADNGTVVAMEVQVGQKVLYGKYSGTEVTVDGEDYLIMRESDIFAII 94
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_LEUCK (10 kDa chaperonin OS=Leuconostoc citreum (strain KM20) GN=groS PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.448e-17 Identity = 44/93 (47.31%), Postives = 64/93 (68.82%), Query Frame = 2 Query: 254 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGILE 529 +KPLGDRV++++ E+T GGI L + A+ KP G+VVAVG G + +K D++VK G QV++ KYAG E+ F GA +L + E D+V I+E Sbjct: 2 LKPLGDRVIIEVTEAAEQTVGGIVLANNAKDKPVTGKVVAVGSGYVLNDGSKQDLTVKSGDQVLFDKYAGQEVSFEGADYLALHEKDIVAIVE 94
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_CHLTE (10 kDa chaperonin OS=Chlorobium tepidum GN=groS PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.448e-17 Identity = 44/93 (47.31%), Postives = 61/93 (65.59%), Query Frame = 2 Query: 251 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGIL 526 ++KPL DRV+VK EEKT GG+++P + KP GEVVAVG GK + + + VK G +V+Y KY+GTE+ G +LI+RE D+ IL Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPMYGEVVAVGPGKVSDAGQVVAMQVKAGDKVLYGKYSGTEVHVEGEDYLIMRESDIFAIL 94
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_LACZE (10 kDa chaperonin OS=Lactobacillus zeae GN=groS PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.891e-17 Identity = 44/91 (48.35%), Postives = 65/91 (71.43%), Query Frame = 2 Query: 254 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGI 523 +KPLGDRV+V++ EE+T GGI L + A+ KPQ G+VVAVGEG + K L ++VK G V+Y KYAG+E+++ G +L++ E D++ I Sbjct: 2 LKPLGDRVIVEVVEEEEQTVGGIVLANNAKQKPQTGKVVAVGEGALTPEGKRLPMAVKVGDTVLYDKYAGSEVKYEGQDYLVLHEKDIMAI 92
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_LACS1 (10 kDa chaperonin OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=groS PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.891e-17 Identity = 38/93 (40.86%), Postives = 68/93 (73.12%), Query Frame = 2 Query: 254 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGILE 529 +KPLGDRV++K++ EE++ GGI + S A+ KP GEV+AVG G+ + +++ VK G V++ KYAG+E+++ G +L++RE+D++ +++ Sbjct: 2 LKPLGDRVVLKVQKEEEQSIGGIVIASNAKEKPTTGEVIAVGNGRILDNGQRVEPEVKVGQSVVFDKYAGSEVKYEGEEYLVIRENDIIAVID 94
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_LACCB (10 kDa chaperonin OS=Lactobacillus casei (strain BL23) GN=groS PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.891e-17 Identity = 44/91 (48.35%), Postives = 65/91 (71.43%), Query Frame = 2 Query: 254 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGI 523 +KPLGDRV+V++ EE+T GGI L + A+ KPQ G+VVAVGEG + K L ++VK G V+Y KYAG+E+++ G +L++ E D++ I Sbjct: 2 LKPLGDRVIVEVVEEEEQTVGGIVLANNAKQKPQTGKVVAVGEGALTPEGKRLPMAVKVGDTVLYDKYAGSEVKYEGQDYLVLHEKDIMAI 92
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_LACC3 (10 kDa chaperonin OS=Lactobacillus casei (strain ATCC 334) GN=groS PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.891e-17 Identity = 44/91 (48.35%), Postives = 65/91 (71.43%), Query Frame = 2 Query: 254 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGI 523 +KPLGDRV+V++ EE+T GGI L + A+ KPQ G+VVAVGEG + K L ++VK G V+Y KYAG+E+++ G +L++ E D++ I Sbjct: 2 LKPLGDRVIVEVVEEEEQTVGGIVLANNAKQKPQTGKVVAVGEGALTPEGKRLPMAVKVGDTVLYDKYAGSEVKYEGQDYLVLHEKDIMAI 92
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_DESOH (10 kDa chaperonin OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=groS PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.891e-17 Identity = 45/92 (48.91%), Postives = 63/92 (68.48%), Query Frame = 2 Query: 257 KPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGILE 529 +PL DR+LVK E KT GGI +P A+ KP G+V+AVG G+ KL + VK G +V++ KY GTE++ +G +LI+REDD++GILE Sbjct: 4 RPLHDRILVKRVEEETKTKGGIIIPDTAKEKPIEGKVMAVGNGRLGEDGKLIPLEVKKGDRVLFGKYGGTEVKMDGQEYLIMREDDILGILE 95
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_THET8 (10 kDa chaperonin OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=groS PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 2.469e-17 Identity = 44/95 (46.32%), Postives = 65/95 (68.42%), Query Frame = 2 Query: 248 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGILE 529 T IKPLGDRV+VK E KT GGI LP A+ KPQ G+V+AVG G+ + ++ + VK G V+++KY GTE+E +G ++I+ E D++ +L+ Sbjct: 7 TVIKPLGDRVVVKRIEEEPKTKGGIVLPDTAKEKPQKGKVIAVGTGRVLENGQRVPLEVKEGDIVVFAKYGGTEIEIDGEEYVILSERDLLAVLQ 101 The following BLAST results are available for this feature:
BLAST of CX294717 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 489
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294717 ID=CX294717; Name=CX294717; organism=Citrus clementina; type=EST; length=585bpback to top |