CX294717
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_RHOCS (10 kDa chaperonin OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=groS PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.501e-17 Identity = 42/92 (45.65%), Postives = 64/92 (69.57%), Query Frame = 2 Query: 257 KPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGILE 529 +PL DRV+VK E+KT GGI +P A+ KPQ GE++AVG G KL + VK G +V++ K++GTE++ +G +LI++E D++G+LE Sbjct: 4 RPLHDRVVVKRVESEQKTAGGIIIPDTAKEKPQEGEIIAVGSGARDESGKLIALDVKVGDRVLFGKWSGTEVKIDGVEYLIMKESDIMGVLE 95
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_GEOSM (10 kDa chaperonin OS=Geobacter sp. (strain M21) GN=groS PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.185e-17 Identity = 42/94 (44.68%), Postives = 64/94 (68.09%), Query Frame = 2 Query: 251 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGILE 529 +++PL DR++VK T GG+++P A+ KPQ GEVVAVG GK K+ I +K G +V++ KYAG+E++ G LI+REDD++G++E Sbjct: 2 NLRPLQDRIIVKRVEEATMTAGGLYIPETAKEKPQQGEVVAVGNGKRGDDGKVYPIDLKVGDKVLFGKYAGSEVKLEGEDFLIMREDDILGVVE 95
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH101_BRAJA (10 kDa chaperonin 1 OS=Bradyrhizobium japonicum GN=groS1 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.185e-17 Identity = 41/92 (44.57%), Postives = 65/92 (70.65%), Query Frame = 2 Query: 257 KPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGILE 529 +PL DRVLV+ EEKT GGI +P A+ KPQ GE++A G G + +L I VKPG +V++ K++GTE++ +G +LI++E D++G+++ Sbjct: 4 RPLHDRVLVRRIDAEEKTAGGIIIPDTAKEKPQEGEIIAAGSGGRNEQGQLIPIDVKPGDRVLFGKWSGTEVKIDGQDYLIMKESDLLGVVD 95
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_PROMS (10 kDa chaperonin OS=Prochlorococcus marinus (strain AS9601) GN=groS PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.383e-17 Identity = 40/94 (42.55%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 248 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGIL 526 +++KPLGDR+ +K+ EEKT GGI LP +A+ KPQ GEV VG GK ++ V G +V+YSKYAGT+++ G ++++ E D++ ++ Sbjct: 9 STVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNEDGSRQTPEVSIGDKVLYSKYAGTDIKLGGDEYVLLSEKDILAVV 102
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_NEIGO (10 kDa chaperonin OS=Neisseria gonorrhoeae GN=groS PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.383e-17 Identity = 46/95 (48.42%), Postives = 65/95 (68.42%), Query Frame = 2 Query: 251 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGK--AKLDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGILE 529 +I+PL DRV+VK EEKT GI LP AA KP GEV+AVG GK +GK A+ + VK G ++I+ KY+G ++ +G L++RE+D+ GI+E Sbjct: 2 TIRPLHDRVVVKRLEAEEKTASGIVLPGAAAEKPDMGEVIAVGAGK-IGKDGARRPLDVKAGDKIIFGKYSGQTVKADGEELLVMREEDIFGIVE 95
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_NEIG1 (10 kDa chaperonin OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=groS PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.383e-17 Identity = 46/95 (48.42%), Postives = 65/95 (68.42%), Query Frame = 2 Query: 251 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGK--AKLDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGILE 529 +I+PL DRV+VK EEKT GI LP AA KP GEV+AVG GK +GK A+ + VK G ++I+ KY+G ++ +G L++RE+D+ GI+E Sbjct: 2 TIRPLHDRVVVKRLEAEEKTASGIVLPGAAAEKPDMGEVIAVGAGK-IGKDGARRPLDVKAGDKIIFGKYSGQTVKADGEELLVMREEDIFGIVE 95
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_HYDS0 (10 kDa chaperonin OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=groS PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.383e-17 Identity = 40/94 (42.55%), Postives = 68/94 (72.34%), Query Frame = 2 Query: 254 IKPLGDRVLVK-IKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGILE 529 +KP+ D+++VK ++ E+KT GI +P A+ KPQ GEV+AVG GK + ++ ++V G +V+++KYAGTE+E +G +L++ ED+V+ I+E Sbjct: 3 LKPIYDKIVVKRMEEKEQKTPSGIIIPDTAKEKPQVGEVIAVGNGKVLNNGEIRPLAVNVGDKVLFNKYAGTEVELDGEKYLVMAEDEVLAIIE 96
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_GEOBB (10 kDa chaperonin OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=groS PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.383e-17 Identity = 42/94 (44.68%), Postives = 64/94 (68.09%), Query Frame = 2 Query: 251 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGILE 529 +++PL DR++VK T GG+++P A+ KPQ GEVVAVG GK K+ I +K G +V++ KYAG+E++ G LI+REDD++G++E Sbjct: 2 NLRPLQDRIIVKRVEEATMTAGGLYIPETAKEKPQQGEVVAVGNGKRGEDGKVYPIDLKVGDKVLFGKYAGSEVKLEGEDFLIMREDDILGVVE 95
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_DESAH (10 kDa chaperonin OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=groS PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.383e-17 Identity = 42/94 (44.68%), Postives = 64/94 (68.09%), Query Frame = 2 Query: 251 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGILE 529 S++PL DR+LV+ EKT GGI +P A+ KP G+VVA G G+ KL + +K G +++SKY GTE++ +G +LI+R+DDV+G++E Sbjct: 2 SLRPLQDRILVERVQETEKTKGGIIIPDTAKEKPAEGKVVASGNGRVGEDGKLIPMDLKVGDTILFSKYGGTEVKIDGTDYLIMRQDDVLGVIE 95
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_CAUCR (10 kDa chaperonin OS=Caulobacter crescentus GN=groS PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.383e-17 Identity = 44/92 (47.83%), Postives = 63/92 (68.48%), Query Frame = 2 Query: 257 KPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGILE 529 +PLGDRVLVK E KT GGI +P A+ KPQ GEVVAVG G K + + VK G ++++ K++GTE++ +G LI++E DV+G++E Sbjct: 4 RPLGDRVLVKRVEEETKTKGGIIIPDTAKEKPQEGEVVAVGPGARNDKGDVVALDVKAGDRILFGKWSGTEVKVDGQDLLIMKESDVLGVVE 95 The following BLAST results are available for this feature:
BLAST of CX294717 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 489
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294717 ID=CX294717; Name=CX294717; organism=Citrus clementina; type=EST; length=585bpback to top |