CX294717

Overview
NameCX294717
Unique NameCX294717
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length585
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_BACCQ (10 kDa chaperonin OS=Bacillus cereus (strain Q1) GN=groS PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.498e-18
Identity = 41/92 (44.57%), Postives = 65/92 (70.65%), Query Frame = 2
Query:  254 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGIL 526
            +KPLGDRV++++   EEKT  GI LP  A+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G  +LI+RE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93          
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_BACC7 (10 kDa chaperonin OS=Bacillus cereus (strain AH187) GN=groS PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.498e-18
Identity = 41/92 (44.57%), Postives = 65/92 (70.65%), Query Frame = 2
Query:  254 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGIL 526
            +KPLGDRV++++   EEKT  GI LP  A+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G  +LI+RE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93          
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_BACC3 (10 kDa chaperonin OS=Bacillus cereus (strain 03BB102) GN=groS PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.498e-18
Identity = 41/92 (44.57%), Postives = 65/92 (70.65%), Query Frame = 2
Query:  254 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGIL 526
            +KPLGDRV++++   EEKT  GI LP  A+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G  +LI+RE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93          
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_BACC1 (10 kDa chaperonin OS=Bacillus cereus (strain ATCC 10987) GN=groS PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.498e-18
Identity = 41/92 (44.57%), Postives = 65/92 (70.65%), Query Frame = 2
Query:  254 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGIL 526
            +KPLGDRV++++   EEKT  GI LP  A+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G  +LI+RE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93          
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_BACC0 (10 kDa chaperonin OS=Bacillus cereus (strain AH820) GN=groS PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.498e-18
Identity = 41/92 (44.57%), Postives = 65/92 (70.65%), Query Frame = 2
Query:  254 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGIL 526
            +KPLGDRV++++   EEKT  GI LP  A+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G  +LI+RE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93          
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_BACAN (10 kDa chaperonin OS=Bacillus anthracis GN=groS PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.498e-18
Identity = 41/92 (44.57%), Postives = 65/92 (70.65%), Query Frame = 2
Query:  254 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGIL 526
            +KPLGDRV++++   EEKT  GI LP  A+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G  +LI+RE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93          
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_BACAC (10 kDa chaperonin OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=groS PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.498e-18
Identity = 41/92 (44.57%), Postives = 65/92 (70.65%), Query Frame = 2
Query:  254 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGIL 526
            +KPLGDRV++++   EEKT  GI LP  A+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G  +LI+RE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93          
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_BACAA (10 kDa chaperonin OS=Bacillus anthracis (strain A0248) GN=groS PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.498e-18
Identity = 41/92 (44.57%), Postives = 65/92 (70.65%), Query Frame = 2
Query:  254 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGIL 526
            +KPLGDRV++++   EEKT  GI LP  A+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G  +LI+RE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93          
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_ALKOO (10 kDa chaperonin OS=Alkaliphilus oremlandii (strain OhILAs) GN=groS PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.498e-18
Identity = 42/93 (45.16%), Postives = 66/93 (70.97%), Query Frame = 2
Query:  251 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGILE 529
            +IKPLGDRV++K    EE T  GI LP +A+ +PQ  EV+AVG G  +   ++ + VK G +VI+SKYAGTE++F+G  + I+++ D++ ++E
Sbjct:    2 NIKPLGDRVVIKRVEAEETTKSGIVLPGSAKEQPQLAEVMAVGPGGVIEGKEVVMEVKVGDKVIFSKYAGTEVKFDGVEYTILKQSDILAVVE 94          
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_PELLD (10 kDa chaperonin OS=Pelodictyon luteolum (strain DSM 273) GN=groS PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 8.487e-18
Identity = 45/93 (48.39%), Postives = 61/93 (65.59%), Query Frame = 2
Query:  251 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGIL 526
            ++KPL DRV+VK    EEKT GG+++P   + KP  GEVVAVG GK     + L + VK G +V+Y KY+GTE+   G  +LI+RE D+  IL
Sbjct:    2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPMYGEVVAVGAGKMSDSGQLLAMPVKAGDKVLYGKYSGTEVSVEGEDYLIMRESDIFAIL 94          
The following BLAST results are available for this feature:
BLAST of CX294717 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 489
Match NameE-valueIdentityDescription
CH10_BACCQ6.498e-1844.5710 kDa chaperonin OS=Bacillus cereus (strain Q1) G... [more]
CH10_BACC76.498e-1844.5710 kDa chaperonin OS=Bacillus cereus (strain AH187... [more]
CH10_BACC36.498e-1844.5710 kDa chaperonin OS=Bacillus cereus (strain 03BB1... [more]
CH10_BACC16.498e-1844.5710 kDa chaperonin OS=Bacillus cereus (strain ATCC ... [more]
CH10_BACC06.498e-1844.5710 kDa chaperonin OS=Bacillus cereus (strain AH820... [more]
CH10_BACAN6.498e-1844.5710 kDa chaperonin OS=Bacillus anthracis GN=groS PE... [more]
CH10_BACAC6.498e-1844.5710 kDa chaperonin OS=Bacillus anthracis (strain CD... [more]
CH10_BACAA6.498e-1844.5710 kDa chaperonin OS=Bacillus anthracis (strain A0... [more]
CH10_ALKOO6.498e-1845.1610 kDa chaperonin OS=Alkaliphilus oremlandii (stra... [more]
CH10_PELLD8.487e-1848.3910 kDa chaperonin OS=Pelodictyon luteolum (strain ... [more]

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Properties
Property NameValue
Genbank descriptionC05055B03SK FlavSen1 Citrus clementina cDNA clone C05055B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294717 ID=CX294717; Name=CX294717; organism=Citrus clementina; type=EST; length=585bp
TATCAAACTACTCGCTCGCTTCTCGCTTATCATTTCCAATCAGAATCTCT
CTCGCTCTCTCTGCATCTGCAAGATGGCGACAGCTCAGCTAACAGCGTCA
TCAATTAAGGTTCCAGCAAGGAGCTTGACTTCATTCGATGGTCTCAGACC
GTCTTCCGTCAAGTTCGCTTCCGTCGGAGGTGCTGCCAGCCAACGCTCTT
TCCGTCGCTTGGTCGTTAAAGCCGCTGCAGTCGTGGCTCCCAAGTACACT
TCAATTAAACCTTTGGGTGATAGAGTGCTGGTGAAAATCAAGACTGTAGA
GGAGAAAACTGATGGTGGTATTTTTCTGCCATCTGCAGCTCAAACAAAGC
CTCAAGCAGGTGAGGTGGTAGCTGTTGGCGAGGGGAAGACAGTTGGGAAG
GCTAAACTGGACATATCTGTGAAGCCTGGGACCCAGGTCATCTATTCGAA
GTATGCAGGGACTGAGTTGGAGTTCAACGGCGCANATCATCTCATAGTGA
GGGAGGATGACGTAGTTGGCATTCTTGAAACAGATGAAATCAAGGATCTT
AAGCCCCTTAATGACAGAGTTTTCATCAAGGTTGC
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