CX294719

Overview
NameCX294719
Unique NameCX294719
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length641
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig569 contig Ccv1_Contig569:1..641. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294719 vs. ExPASy Swiss-Prot
Match: GSTT1_HUMAN (Glutathione S-transferase theta-1 OS=Homo sapiens GN=GSTT1 PE=1 SV=4)

HSP 1 Score: 70.0922 bits (170), Expect = 1.101e-11
Identity = 58/205 (28.29%), Postives = 99/205 (48.29%), Query Frame = 3
Query:   48 MVVKVYGPAYASPKRVILCLVEK-EIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNY-NPAIYELTIQLLFSSKFGRPVDEKLVKESDEXLGKTLDVYEERLSKSK-YLAGDFFSLADLSHIPFTHYLVGP-----MGRQHMIRDRKHVSALVDD 638
            M +++Y    + P R +    +K +I FE   VDLIKG+  S  + ++ P  ++P ++DGDF L ES AI+ Y   KY+        + ++ R  V+++L  +        +  L  +++F    G PV  + +  +   L  TL + E++  ++K +L G   SLADL  I    + VG       GR  +   R+ V A V +
Sbjct:    1 MGLELYLDLLSQPCRAVYIFAKKNDIPFELRIVDLIKGQHLSDAFAQVNPLKKVPALKDGDFTLTESVAILLYLTRKYKVP-DYWYPQDLQARARVDEYLAWQHTTLRRSCLRALWHKVMFPVFLGEPVSPQTLAATLAELDVTLQLLEDKFLQNKAFLTGPHISLADLVAITELMHPVGAGCQVFEGRPKLATWRQRVEAAVGE 204          
BLAST of CX294719 vs. ExPASy Swiss-Prot
Match: GSTT1_BOVIN (Glutathione S-transferase theta-1 OS=Bos taurus GN=GSTT1 PE=2 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 3.204e-11
Identity = 60/209 (28.71%), Postives = 99/209 (47.37%), Query Frame = 3
Query:   48 MVVKVYGPAYASPKRVILCLVEKE-IEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVE----AHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEXLGKTLDVYEERLSKSK-YLAGDFFSLADLSHIPFTHYLVGP-----MGRQHMIRDRKHVSALVDDI 641
            M +++Y    + P R I    +K  I FE   VDL KG+  S  + ++ P  ++P+++DGDFIL ES AI+ Y A KY+        + ++    V+++L  +      N   A++   +  +F    G PV  +++  +   L   L V E +  + K +L G   SLADL  I    + VG       GR  +   R+ V A V ++
Sbjct:    1 MGLELYLDLLSQPCRAIYIFAKKNRIPFELRTVDLRKGQHLSDAFAQVNPLQKVPILKDGDFILTESVAILLYLARKYKVP-DHWYPQDLQACARVDEYLAWQHTALRRNCLRALWHKVMLPVF---LGEPVSPEMLATTLAELDMALQVLEGKFLQDKAFLTGSHISLADLVAITELMHPVGAGCQVFKGRPKLAAWRQRVEAAVGEV 205          
BLAST of CX294719 vs. ExPASy Swiss-Prot
Match: GST1_SCHPO (Glutathione S-transferase 1 OS=Schizosaccharomyces pombe GN=gst1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.204e-11
Identity = 52/179 (29.05%), Postives = 90/179 (50.28%), Query Frame = 3
Query:   45 TMVVKVYGPAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQD---GDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEXLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYL 572
            T+    +GP   +P +V+  L E ++ +ET  V+  K EQ+SPE+L L P G +P + D    D+ ++ES AI+ Y A+KY ++    L +   E   V Q+L  +A         +  Q  + S + + +    +      + + L V E+ L    YL  + F++ADLS I + ++L
Sbjct:    5 TLWSHAHGP---NPWKVVQALKELDLTYETRYVNFSKNEQKSPEHLALNPNGRVPTLIDHHNNDYTIWESDAILIYLADKYDTERKISLPRDHPEYYKVIQYLFFQASGQG----IIWGQAGWFSVYHQELVISAITRYRNEIKRVLGVLEDILKDRDYLVANRFTIADLSFISWNNFL 176          
BLAST of CX294719 vs. ExPASy Swiss-Prot
Match: GSTT1_MUSDO (Glutathione S-transferase 1 OS=Musca domestica GN=Gst1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.185e-11
Identity = 49/162 (30.25%), Postives = 76/162 (46.91%), Query Frame = 3
Query:   63 YGPAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEXLGKTLDVYEERLSKSKYLAGDFFSLADLS 548
            Y P  A  + V++      IE     ++L  GE   PE+LK+ P   +P + DGDF L+ESRAIM Y  EKY  +   L  K  ++R ++ Q L  +      +  +     +F+     P D +L K+    +    D     L   +Y AGD  ++ADL+
Sbjct:    5 YLPGSAPCRSVLMTAKALGIELNKKLLNLQAGEHLKPEFLKINPQHTIPTLVDGDFALWESRAIMVYLVEKY-GKTDSLFPKCPKKRAVINQRLYFDMGTLYKSFADYYYPQIFAK---APADPELFKK----IETAFDFLNTFLKGHEYAAGDSLTVADLA 158          
BLAST of CX294719 vs. ExPASy Swiss-Prot
Match: GSTZ2_DIACA (Glutathione S-transferase 2 (Fragment) OS=Dianthus caryophyllus GN=GST2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.139e-11
Identity = 43/117 (36.75%), Postives = 62/117 (52.99%), Query Frame = 3
Query:   90 RVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKL 440
            RV + L  K ++FE   VDL+KGE  +PE+LKL P G +P +  GD ++ +S AI+ Y  EK+      LL + +++R L  Q   + A N  P    L +      K G   DEKL
Sbjct:   22 RVRIALHLKGLDFEYKAVDLLKGEHLTPEFLKLNPLGYVPALVHGDIVIADSLAIIMYLEEKFPE--NPLLPRDLQKRALNYQAANIVASNIQP-FQNLAVLNYIEEKLGS--DEKL 133          
BLAST of CX294719 vs. ExPASy Swiss-Prot
Match: GSTT2_HUMAN (Glutathione S-transferase theta-2 OS=Homo sapiens GN=GSTT2 PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 7.139e-11
Identity = 51/169 (30.18%), Postives = 86/169 (50.89%), Query Frame = 3
Query:   48 MVVKVYGPAYASPKRVILCLVEKE-IEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAI-YELTIQLLFSSKFGRPVDEKLVKESDEXLGKTLDVYEER-LSKSKYLAGDFFSLADL 545
            M ++++    + P R +    +K  I  E   VDL+KG+ +S E+L++   G+LP ++DGDFIL ES AI+ Y + KY++         ++ R  V ++L   A          L +Q+L     G  V E+ V+ +   + + L   E++ L    +LAG   +LADL
Sbjct:    1 MGLELFLDLVSQPSRAVYIFAKKNGIPLELRTVDLVKGQHKSKEFLQINSLGKLPTLKDGDFILTESSAILIYLSCKYQTP-DHWYPSDLQARARVHEYLGWHADCIRGTFGIPLWVQVL-GPLIGVQVPEEKVERNRTAMDQALQWLEDKFLGDRPFLAGQQVTLADL 167          
BLAST of CX294719 vs. ExPASy Swiss-Prot
Match: GSTA_RHILE (Protein gstA OS=Rhizobium leguminosarum GN=gstA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.139e-11
Identity = 44/145 (30.34%), Postives = 74/145 (51.03%), Query Frame = 3
Query:  120 IEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHN--YNPAIYELTIQLLFSSKFGRPVDEKLVKESDEXLGKTLDVYEERLSKSKYLAGDFFSLADLS 548
            + +E V VDL  G  ++P++LKL PFG++PV+ D   ++ +S AI+ Y A KY    T+ L +       +++WL V A    Y P    L    +F + F    DE + +       + L + E  L   ++L GD  ++AD++
Sbjct:   24 VPYELVEVDLAAGAHKAPDFLKLNPFGQVPVLDDNGTVIADSSAILVYLARKYGR--TDWLPEEAVAAARIQKWLSVAAGEIAYGPCAARLV--TVFGADF--RTDEVIARAH-----RILALVEAELGARRFLLGDNATIADIA 157          
BLAST of CX294719 vs. ExPASy Swiss-Prot
Match: GST2_SCHPO (Glutathione S-transferase 2 OS=Schizosaccharomyces pombe GN=gst2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.139e-11
Identity = 51/172 (29.65%), Postives = 84/172 (48.84%), Query Frame = 3
Query:   81 SPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQD---GDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEXLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMG 587
            +P +V+L L E  + +E +  D  KGEQ+  E+L L P G +P + D    D+ ++ES AI+ Y A+KY +     L     E   + Q+L  +A        +      F+     PV   + +  +E + + L V E+ L    YL  + +++ADLS IP+ + L G  G
Sbjct:   14 NPWKVVLALKELNLSYEQIFYDFQKGEQKCKEHLALNPNGRVPTLVDHKNNDYTIWESDAILIYLADKYDTDRKISLSFDDPEYYKLIQYLFFQASGQGVIWGQAG---WFNFFHHEPVVSAVTRYRNE-IKRVLGVLEDILKDRDYLVANKYTIADLSFIPWNYNLGGLFG 181          
The following BLAST results are available for this feature:
BLAST of CX294719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
GSTT1_HUMAN1.101e-1128.29Glutathione S-transferase theta-1 OS=Homo sapiens ... [more]
GSTT1_BOVIN3.204e-1128.71Glutathione S-transferase theta-1 OS=Bos taurus GN... [more]
GST1_SCHPO3.204e-1129.05Glutathione S-transferase 1 OS=Schizosaccharomyces... [more]
GSTT1_MUSDO4.185e-1130.25Glutathione S-transferase 1 OS=Musca domestica GN=... [more]
GSTZ2_DIACA7.139e-1136.75Glutathione S-transferase 2 (Fragment) OS=Dianthus... [more]
GSTT2_HUMAN7.139e-1130.18Glutathione S-transferase theta-2 OS=Homo sapiens ... [more]
GSTA_RHILE7.139e-1130.34Protein gstA OS=Rhizobium leguminosarum GN=gstA PE... [more]
GST2_SCHPO7.139e-1129.65Glutathione S-transferase 2 OS=Schizosaccharomyces... [more]

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Properties
Property NameValue
Genbank descriptionC05055B05SK FlavSen1 Citrus clementina cDNA clone C05055B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294719 ID=CX294719; Name=CX294719; organism=Citrus clementina; type=EST; length=641bp
GCTCAATAGCTGCTTTTTATCGACAGAAAAAGTTAACACCAGCAACGATG
GTGGTCAAGGTGTACGGTCCGGCTTATGCTTCTCCCAAACGAGTGATTTT
GTGCTTGGTTGAGAAGGAAATCGAATTTGAAACTGTCCCCGTTGATCTCA
TCAAAGGAGAGCAGAGAAGTCCTGAGTACCTCAAATTACAGCCTTTTGGA
GAGCTTCCTGTCATTCAAGATGGAGATTTTATTTTATACGAGTCGCGAGC
TATCATGAGGTACTATGCCGAAAAGTACAGGTCTCAAGGAACCGAACTTC
TGGGTAAAACAATTGAAGAAAGAGGCCTGGTGGAACAGTGGCTAGAAGTA
GAGGCACACAACTACAACCCAGCAATTTACGAGCTGACCATCCAACTTTT
ATTTTCTTCCAAGTTTGGACGTCCCGTTGATGAAAAATTGGTGAAGGAGA
GTGACGAANAGCTTGGAAAAACGCTCGACGTTTACGAGGAGAGGCTCTCA
AAGAGCAAGTATTTGGCTGGTGATTTCTTCAGCCTGGCTGATCTGAGTCA
CATTCCATTTACCCACTACTTGGTTGGGCCGATGGGGAGACAGCATATGA
TTAGAGACAGGAAGCATGTGAGTGCTTTGGTGGATGATATT
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