CX294722
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294722 vs. ExPASy Swiss-Prot
Match: EF1A_METTP (Elongation factor 1-alpha OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=tuf PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 3.279e-47 Identity = 86/182 (47.25%), Postives = 124/182 (68.13%), Query Frame = 3 Query: 3 GTVPLGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVXVIKNV 548 GTVP+GRVETGVLK G V F P+ ++ EVKS+E+HH+ + EA PGDN+G+NV+ + D++RG V + D+P A FT+Q++++ HP I GY PV CHT+ +A +E+ K+D R+G E+ P F+K GDA ++ + PTKPMV+E + P LGRFA+RDM T+A + +NV Sbjct: 241 GTVPVGRVETGVLKKGDKVIFEPAHVSGEVKSIEIHHQEIPEAYPGDNIGWNVRGIGKNDIRRGDVCGHV-DNPPTVAKEFTAQIVVLQHPSAISAGYTPVFHCHTAQVACTITEIKAKLDPRTGSVKEQNPAFIKTGDAAIISVRPTKPMVIEKVKEIPQLGRFAIRDMGMTIAAGMCQNV 421
BLAST of CX294722 vs. ExPASy Swiss-Prot
Match: EF1A_META3 (Elongation factor 1-alpha OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=tuf PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 3.279e-47 Identity = 91/186 (48.92%), Postives = 128/186 (68.82%), Query Frame = 3 Query: 3 GTVPLGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVXVIKNVEKKD 560 GTVP+GRVETGV+KPG V F P+G++ E+K++E HHE L +A PGDNVGFNV+ V KD+K+G V + + P A FT+Q++++ HP + GY PV HT+ +A F EL K++ +G+ E+ P FLK GDA +VK++PTKPMV+E + P LGRFA+RDM TVA + +V+ K+ Sbjct: 243 GTVPVGRVETGVMKPGDKVVFEPAGVSGEIKTIEAHHEQLPKAEPGDNVGFNVRGVGKKDIKKGDVLGHPDNIPT-VAEEFTAQIVVLQHPSVMTVGYTPVFHAHTAQVACTFMELQKKLNPATGEVKEENPDFLKAGDAAIVKIMPTKPMVIENVKEIPQLGRFAIRDMGMTVAAGMCIDVKAKN 427
BLAST of CX294722 vs. ExPASy Swiss-Prot
Match: EF1A_METST (Elongation factor 1-alpha OS=Methanosphaera stadtmanae (strain DSM 3091) GN=tuf PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 4.282e-47 Identity = 89/175 (50.86%), Postives = 121/175 (69.14%), Query Frame = 3 Query: 3 GTVPLGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVA 527 GTVP+GR+ETG+LK + F P+G+T EVKS+EMHHE L +A PGDNVGFNV+ V D+KRG VA +++ P+ A F +Q++++ HPG + GY PV HT+ +A F L K+D +G+ E+ P FLK GDA +V + PTKPMV+E + P +GRFA+RDM QTVA Sbjct: 229 GTVPVGRIETGILKTAENIAFEPAGVTGEVKSIEMHHEVLDKAEPGDNVGFNVRGVGKNDIKRGDVAGTTQNPPS-VAKEFKAQIVVLQHPGVMTVGYTPVFHAHTAQVACTFLSLDVKLDPATGQPKEENPDFLKTGDAALVTIKPTKPMVIENIKEIPHMGRFAIRDMGQTVA 402
BLAST of CX294722 vs. ExPASy Swiss-Prot
Match: EF1A_METKA (Elongation factor 1-alpha OS=Methanopyrus kandleri GN=tuf PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 4.282e-47 Identity = 96/196 (48.98%), Postives = 128/196 (65.31%), Query Frame = 3 Query: 3 GTVPLGRVETGVLKPGMVVTFGPSGLTT-------EVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAA---NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVXVIKNVEKKD 560 GTVP+GRVETGVL+ G V F P+ T EV+S+EMHHE ++ A PGDN+GFNVK V D+ RG VA + D+PA F +Q++++ HP I GY PV CHT+ +A KF EL+ KID +G+ +E+ P FLK G+A V++ PTKPMV+E S P LGRFA+RDM QTVA + +EK++ Sbjct: 229 GTVPVGRVETGVLEVGDTVRFEPAYTATGGRKGEGEVRSIEMHHEEIERAEPGDNIGFNVKGVGKNDISRGDVACHP-DEPATVVTPDDTFIAQIVVLQHPSAITAGYTPVFHCHTAQVACKFEELIEKIDPATGEVIEENPDFLKTGEAAKVRIRPTKPMVIEEVSFIPQLGRFAIRDMGQTVAAGMCVKIEKEE 423
BLAST of CX294722 vs. ExPASy Swiss-Prot
Match: EF1A_METBF (Elongation factor 1-alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=tuf PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 7.305e-47 Identity = 90/185 (48.65%), Postives = 124/185 (67.03%), Query Frame = 3 Query: 3 GTVPLGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVXVIKNVEKK 557 GTVP+GRVETG +K G V F P G EVKS+EMHHE + +ALPGDN+G+NV+ + D++RG V ++ D+P + A F Q++++ HP I GY PV HTS IA + EL K+D +SG+ E+ P FLK GDA +V + PTKPMV+E + P LGRFA+RDM T+A + +V++K Sbjct: 239 GTVPVGRVETGTMKKGDKVVFMPGGAAGEVKSIEMHHEEIPQALPGDNIGWNVRGIGKADVRRGDVCGHT-DNPPKVADTFVGQIVVLQHPSAITAGYTPVFHAHTSQIACQLIELNKKLDPKSGQVKEENPTFLKAGDAAIVTIKPTKPMVIEPVKEIPQLGRFAIRDMGMTIAAGMCMSVKQK 422
BLAST of CX294722 vs. ExPASy Swiss-Prot
Match: EF1A_PYRWO (Elongation factor 1-alpha OS=Pyrococcus woesei GN=tuf PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 9.540e-47 Identity = 90/192 (46.88%), Postives = 133/192 (69.27%), Query Frame = 3 Query: 3 GTVPLGRVETGVLKPGMVVTFGPSG------LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPA--REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVXVIKNVEK 554 GTVP+GRVETG L+ G VV F P+ + EVKS+EMHHE L+EALPGDN+GFNV+ V+ D+KRG VA ++ + P R F +Q+I++NHP I GY+PVL HT+ + V+F +L+ K+D ++G +E+ P+F+K GDA +V + P KP+V+E + P LGRFA+RDM T+A ++ ++++ Sbjct: 237 GTVPVGRVETGKLRVGEVVIFEPASTIFHKPIQGEVKSIEMHHEPLEEALPGDNIGFNVRGVSKNDIKRGDVAGHTTNPPTVVRTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQVPVRFEQLLAKLDPKTGNIVEENPQFIKTGDAAIVILRPMKPVVLEPVKEIPQLGRFAIRDMGMTIAAGMVISIQR 428
BLAST of CX294722 vs. ExPASy Swiss-Prot
Match: EF1A_PYRFU (Elongation factor 1-alpha OS=Pyrococcus furiosus GN=tuf PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 9.540e-47 Identity = 90/192 (46.88%), Postives = 133/192 (69.27%), Query Frame = 3 Query: 3 GTVPLGRVETGVLKPGMVVTFGPSG------LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPA--REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVXVIKNVEK 554 GTVP+GRVETG L+ G VV F P+ + EVKS+EMHHE L+EALPGDN+GFNV+ V+ D+KRG VA ++ + P R F +Q+I++NHP I GY+PVL HT+ + V+F +L+ K+D ++G +E+ P+F+K GDA +V + P KP+V+E + P LGRFA+RDM T+A ++ ++++ Sbjct: 235 GTVPVGRVETGKLRVGEVVIFEPASTIFHKPIQGEVKSIEMHHEPLEEALPGDNIGFNVRGVSKNDIKRGDVAGHTTNPPTVVRTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQVPVRFEQLLAKLDPKTGNIVEENPQFIKTGDAAIVILRPMKPVVLEPVKEIPQLGRFAIRDMGMTIAAGMVISIQR 426
BLAST of CX294722 vs. ExPASy Swiss-Prot
Match: EF1A_SULAC (Elongation factor 1-alpha OS=Sulfolobus acidocaldarius GN=tuf PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.627e-46 Identity = 93/185 (50.27%), Postives = 128/185 (69.19%), Query Frame = 3 Query: 3 GTVPLGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVXVIKNVEKK 557 G VP+GR+E+GVLK G + F P G EV+S+E HH + +A PGDN+GFNV+ V KD+KRG VA S +P A FT+QVI++ HP +G GY PVL HT+ IA + SE+ ++ID ++GKE EK P+F+K GD+ +VK P K +V E F ++P LGRFA+RDM +TV V VI +V+ + Sbjct: 247 GVVPVGRIESGVLKVGDKIVFMPVGKIGEVRSIETHHTKIDKAEPGDNIGFNVRGVEKKDVKRGDVAG-SVQNPPTVADEFTAQVIVIWHPTAVGVGYTPVLHVHTASIACRVSEITSRIDPKTGKEAEKNPQFIKAGDSAIVKFKPIKELVAEKFREFPALGRFAMRDMGKTVGVGVIIDVKPR 430
BLAST of CX294722 vs. ExPASy Swiss-Prot
Match: EF1AS_PORPU (Elongation factor 1-alpha S OS=Porphyra purpurea GN=TEF-S PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.125e-46 Identity = 106/206 (51.46%), Postives = 139/206 (67.48%), Query Frame = 3 Query: 3 GTVPLGRVETGVLKPGMVVTFGPSG-LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL-------------EKEPK------FLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVXVIKNVEKKD 560 GTVP+GRVETG+LK GM VTF P+G EVKSVEMHH ++ +A+PGDNVGFNVK + VKD+KRG V ++K+DP F + VII +H I NGY PVLDCHT+HIA KF+ +++K D+R GK+ + EP+ K G++ V + PTK MVVE +S Y PLGRFAVRDM++TVAV VI+ V+ ++ Sbjct: 276 GTVPVGRVETGILKAGMQVTFEPAGKAAVEVKSVEMHHTSVPQAIPGDNVGFNVK-LTVKDIKRGDVCGDTKNDPPIPTECFLANVIIQDHKN-IRNGYTPVLDCHTAHIACKFASILSKKDKR-GKQTHDVSDDTEWATKDDAEPRNNRMNIAAKTGESVNVWLQPTKAMVVEAYSMYSPLGRFAVRDMKKTVAVGVIQCVQPRN 478
BLAST of CX294722 vs. ExPASy Swiss-Prot
Match: EF1A_STAMF (Elongation factor 1-alpha OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=tuf PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 2.776e-46 Identity = 89/183 (48.63%), Postives = 130/183 (71.04%), Query Frame = 3 Query: 3 GTVPLGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVXVIKNVE 551 GTVP+GRVETGVL+ G V F P EV+S+E HH +++A PGDN+GFNV+ V+ +D++RG VA + D+P A FT++V I+ HP I GY PV+ HT+ +A + E+ K+D R+GK +E+ P+F+K GDA +V+ P KP+VVE +SD+PPLGRFA+RDM +T+ + V+ +V+ Sbjct: 248 GTVPVGRVETGVLRVGDKVVFMPPAKVGEVRSIETHHVRIEKAEPGDNIGFNVRGVSKRDIRRGDVAGHL-DNPPTVAEEFTARVFIIWHPTAITVGYTPVIHIHTASVASRIVEIKAKLDPRTGKVVEENPQFIKMGDAAIVRFKPIKPLVVEKYSDFPPLGRFAMRDMGKTIGIGVVVDVK 429 The following BLAST results are available for this feature:
BLAST of CX294722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 180
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294722 ID=CX294722; Name=CX294722; organism=Citrus clementina; type=EST; length=608bpback to top |