CX294722

Overview
NameCX294722
Unique NameCX294722
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length608
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9339 contig Ccv1_Contig9339:823..1430. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294722 vs. ExPASy Swiss-Prot
Match: EF1A1_CRIGR (Elongation factor 1-alpha 1 OS=Cricetulus griseus GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 4.843e-83
Identity = 153/202 (75.74%), Postives = 172/202 (85.15%), Query Frame = 3
Query:    3 GTVPLGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVXVIKNVEKKDPTGAKVTKSAAKKSES 608
            GTVP+GRVETGVLKPGMVVTF P  +TTEVKSVEMHHEAL EALPGDNVGFNVKNV+VKD++RG VA +SK+DP  EAA FT+QVII+NHPGQI  GYAPVLDCHT+HIA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM VE+FSDYPPLGRFAVRDMRQTVAV VIK V+KK     KVTKSA K  ++
Sbjct:  260 GTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKKAAGAGKVTKSAQKAQKA 461          
BLAST of CX294722 vs. ExPASy Swiss-Prot
Match: EF1A1_BOVIN (Elongation factor 1-alpha 1 OS=Bos taurus GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 4.843e-83
Identity = 153/202 (75.74%), Postives = 172/202 (85.15%), Query Frame = 3
Query:    3 GTVPLGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVXVIKNVEKKDPTGAKVTKSAAKKSES 608
            GTVP+GRVETGVLKPGMVVTF P  +TTEVKSVEMHHEAL EALPGDNVGFNVKNV+VKD++RG VA +SK+DP  EAA FT+QVII+NHPGQI  GYAPVLDCHT+HIA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM VE+FSDYPPLGRFAVRDMRQTVAV VIK V+KK     KVTKSA K  ++
Sbjct:  260 GTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKKAAGAGKVTKSAQKAQKA 461          
BLAST of CX294722 vs. ExPASy Swiss-Prot
Match: EF1A_ABSGL (Elongation factor 1-alpha OS=Absidia glauca GN=TEF-1 PE=3 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 6.325e-83
Identity = 150/201 (74.63%), Postives = 176/201 (87.56%), Query Frame = 3
Query:    3 GTVPLGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVXVIKNVEKKDPTGAKVTKSAAKKSE 605
            GTVP+GRVETGV+K GMVVTF P+ +TTEVKSVEMHHE L E LPGDNVGFNVKNV+VKD++RG V S+SK+DPA+EA +FT+QVI++NHPGQIG GYAPVLDCHT+HIA KF+EL+ KIDRRSGK+LE  PKF+K+GD+ +VKMIP+KPM VE ++DYPPLGRFAVRDMRQTVAV VIK VEK D  G KVTK+AAK  E
Sbjct:  258 GTVPVGRVETGVIKAGMVVTFAPANVTTEVKSVEMHHEQLVEGLPGDNVGFNVKNVSVKDIRRGNVCSDSKNDPAKEAGSFTAQVIVLNHPGQIGAGYAPVLDCHTAHIACKFAELLEKIDRRSGKKLEDAPKFVKSGDSAIVKMIPSKPMCVEAYTDYPPLGRFAVRDMRQTVAVGVIKAVEKVDKAG-KVTKAAAKAGE 457          
BLAST of CX294722 vs. ExPASy Swiss-Prot
Match: EF1A_SCHCO (Elongation factor 1-alpha OS=Schizophyllum commune GN=TEF1 PE=3 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.079e-82
Identity = 144/201 (71.64%), Postives = 178/201 (88.56%), Query Frame = 3
Query:    3 GTVPLGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVXVIKNVEKKDPTGAKVTKSAAKKSE 605
            GTVP+GRVETG++K GMVVTF PS +TTEVKSVEMHHE L E  PGDNVGFNVKNV+VKD++RG VAS+SK+DPA+EAA+F +QVI++NHPGQIG GYAPVLDCHT+HIA KF+EL+ KIDRR+GK LE  PKF+K+GDA +VK++P+KPM VE++++YPPLGRFAVRDMRQTVAV +IK+V+K D +G KVTKSA K ++
Sbjct:  258 GTVPVGRVETGIIKAGMVVTFAPSNVTTEVKSVEMHHEQLAEGKPGDNVGFNVKNVSVKDIRRGNVASDSKNDPAKEAASFNAQVIVLNHPGQIGAGYAPVLDCHTAHIACKFAELLEKIDRRTGKSLEASPKFVKSGDACIVKLVPSKPMCVESYNEYPPLGRFAVRDMRQTVAVGIIKSVDKTDKSGGKVTKSAEKAAK 458          
BLAST of CX294722 vs. ExPASy Swiss-Prot
Match: EF1A_CAEEL (Elongation factor 1-alpha OS=Caenorhabditis elegans GN=eft-3 PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.079e-82
Identity = 146/198 (73.74%), Postives = 173/198 (87.37%), Query Frame = 3
Query:    3 GTVPLGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVXVIKNVEKKDPTGAKVTKSAAK 596
            GTVP+GRVETG++KPGMVVTF P  +TTEVKSVEMHHE+L EA+PGDNVGFNVKNV+VKD++RG V S+SK DPA+EA  F +QVIIMNHPGQI NGY PVLDCHT+HIA KF+EL  K+DRR+GK++E  PKFLK+GDAG+V++IPTKP+ VE+F+DY PLGRFAVRDMRQTVAV VIK+VEK D +  KVTKSA K
Sbjct:  260 GTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSVEKSDGSSGKVTKSAQK 457          
BLAST of CX294722 vs. ExPASy Swiss-Prot
Match: EF1A2_RABIT (Elongation factor 1-alpha 2 OS=Oryctolagus cuniculus GN=EEF1A2 PE=1 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 1.840e-82
Identity = 149/202 (73.76%), Postives = 171/202 (84.65%), Query Frame = 3
Query:    3 GTVPLGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVXVIKNVEKKDPTGAKVTKSAAKKSES 608
            GTVP+GRVETG+L+PGMVVTF P  +TTEVKSVEMHHEAL EALPGDNVGFNVKNV+VKD++RG V  +SK DP +EAA FTSQVII+NHPGQI  GY+PV+DCHT+HIA KF+EL  KIDRRSGK+LE  PK LK+GDA +V+M+P KPM VE+FS YPPLGRFAVRDMRQTVAV VIKNVEKK     KVTKSA K  ++
Sbjct:  260 GTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKKSGGAGKVTKSAQKAQKA 461          
BLAST of CX294722 vs. ExPASy Swiss-Prot
Match: EF1A2_HUMAN (Elongation factor 1-alpha 2 OS=Homo sapiens GN=EEF1A2 PE=1 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 1.840e-82
Identity = 149/202 (73.76%), Postives = 171/202 (84.65%), Query Frame = 3
Query:    3 GTVPLGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVXVIKNVEKKDPTGAKVTKSAAKKSES 608
            GTVP+GRVETG+L+PGMVVTF P  +TTEVKSVEMHHEAL EALPGDNVGFNVKNV+VKD++RG V  +SK DP +EAA FTSQVII+NHPGQI  GY+PV+DCHT+HIA KF+EL  KIDRRSGK+LE  PK LK+GDA +V+M+P KPM VE+FS YPPLGRFAVRDMRQTVAV VIKNVEKK     KVTKSA K  ++
Sbjct:  260 GTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKKSGGAGKVTKSAQKAQKA 461          
BLAST of CX294722 vs. ExPASy Swiss-Prot
Match: EF1A2_BOVIN (Elongation factor 1-alpha 2 OS=Bos taurus GN=EEF1A2 PE=2 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 1.840e-82
Identity = 149/202 (73.76%), Postives = 171/202 (84.65%), Query Frame = 3
Query:    3 GTVPLGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVXVIKNVEKKDPTGAKVTKSAAKKSES 608
            GTVP+GRVETG+L+PGMVVTF P  +TTEVKSVEMHHEAL EALPGDNVGFNVKNV+VKD++RG V  +SK DP +EAA FTSQVII+NHPGQI  GY+PV+DCHT+HIA KF+EL  KIDRRSGK+LE  PK LK+GDA +V+M+P KPM VE+FS YPPLGRFAVRDMRQTVAV VIKNVEKK     KVTKSA K  ++
Sbjct:  260 GTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKKSGGAGKVTKSAQKAQKA 461          
BLAST of CX294722 vs. ExPASy Swiss-Prot
Match: EF1A_TRIRE (Elongation factor 1-alpha OS=Trichoderma reesei GN=tef1 PE=3 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 2.404e-82
Identity = 147/201 (73.13%), Postives = 172/201 (85.57%), Query Frame = 3
Query:    3 GTVPLGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVXVIKNVEKKDPTGAKVTKSAAKKSE 605
            GTVP+GR+ETGVLKPGMVVTF PS +TTEVKSVEMHHE L E  PGDNVGFNVKNV+VK+++RG VA +SK+DP   AA+FT+QVI+MNHPGQ+G GYAPVLDCHT+HIA KF+EL+ KIDRR+GK  E  PKF+K+GD+ +VKMIP+KPM VE F+DYPPLGRFAVRDMRQTVAV VIK VEK     AKVTKSAAK ++
Sbjct:  259 GTVPVGRIETGVLKPGMVVTFAPSNVTTEVKSVEMHHEQLAEGQPGDNVGFNVKNVSVKEIRRGNVAGDSKNDPPMGAASFTAQVIVMNHPGQVGAGYAPVLDCHTAHIACKFAELLEKIDRRTGKATESAPKFIKSGDSAIVKMIPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKAVEKSSAAAAKVTKSAAKAAK 459          
BLAST of CX294722 vs. ExPASy Swiss-Prot
Match: EF1A_ONCVO (Elongation factor 1-alpha OS=Onchocerca volvulus PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 2.404e-82
Identity = 146/198 (73.74%), Postives = 173/198 (87.37%), Query Frame = 3
Query:    3 GTVPLGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVXVIKNVEKKDPTGAKVTKSAAK 596
            GTVP+GRVETG+LKPGM+VTF P  LTTEVKSVEMHHEALQEALPGDNVGFNVKN+++KD++RG VAS+SK+DPA+E   FT+QVIIMNHPGQI  GY PVLDCHT+HIA KF+EL  K+DRRSGK++E  PK LK+GDAG++ +IPTKP+ VETF++YPPLGRFAVRDMRQTVAV VIKNV+K +  G KV K+A K
Sbjct:  260 GTVPVGRVETGILKPGMIVTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKETKMFTAQVIIMNHPGQISAGYTPVLDCHTAHIACKFAELKEKVDRRSGKKVEDNPKSLKSGDAGIIDLIPTKPLCVETFTEYPPLGRFAVRDMRQTVAVGVIKNVDKSEGVG-KVQKAAQK 456          
The following BLAST results are available for this feature:
BLAST of CX294722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
EF1A1_CRIGR4.843e-8375.74Elongation factor 1-alpha 1 OS=Cricetulus griseus ... [more]
EF1A1_BOVIN4.843e-8375.74Elongation factor 1-alpha 1 OS=Bos taurus GN=EEF1A... [more]
EF1A_ABSGL6.325e-8374.63Elongation factor 1-alpha OS=Absidia glauca GN=TEF... [more]
EF1A_SCHCO1.079e-8271.64Elongation factor 1-alpha OS=Schizophyllum commune... [more]
EF1A_CAEEL1.079e-8273.74Elongation factor 1-alpha OS=Caenorhabditis elegan... [more]
EF1A2_RABIT1.840e-8273.76Elongation factor 1-alpha 2 OS=Oryctolagus cunicul... [more]
EF1A2_HUMAN1.840e-8273.76Elongation factor 1-alpha 2 OS=Homo sapiens GN=EEF... [more]
EF1A2_BOVIN1.840e-8273.76Elongation factor 1-alpha 2 OS=Bos taurus GN=EEF1A... [more]
EF1A_TRIRE2.404e-8273.13Elongation factor 1-alpha OS=Trichoderma reesei GN... [more]
EF1A_ONCVO2.404e-8273.74Elongation factor 1-alpha OS=Onchocerca volvulus P... [more]

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Properties
Property NameValue
Genbank descriptionC05055B09SK FlavSen1 Citrus clementina cDNA clone C05055B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294722 ID=CX294722; Name=CX294722; organism=Citrus clementina; type=EST; length=608bp
TTGGAACCGTCCCATTGGGTCGCGTTGAGACCGGTGTCCTCAAGCCTGGT
ATGGTGGTGACATTTGGCCCCTCTGGATTGACAACTGAGGTTAAGTCTGT
TGAGATGCACCACGAAGCTCTGCAGGAGGCCCTTCCGGGTGACAATGTTG
GCTTCAACGTGAAGAACGTTGCTGTCAAGGATCTCAAGCGTGGTTTTGTT
GCTTCCAACTCGAAGGATGATCCGGCCAGGGAAGCTGCCAACTTCACCTC
ACAGGTCATCATCATGAACCACCCTGGCCAGATTGGAAATGGATATGCCC
CAGTGCTTGACTGCCACACCTCCCACATTGCCGTCAAGTTTTCTGAGCTC
GTGACGAAGATTGATAGGCGATCAGGCAAGGAGCTTGAGAAGGAGCCCAA
GTTCTTGAAGAATGGAGATGCTGGAATGGTTAAGATGATTCCCACCAAGC
CCATGGTTGTTGAAACCTTCTCTGACTACCCACCTCTTGGTCGTTTTGCC
GTTAGGGACATGCGTCAGACTGTTGCTGTTGNTGTGATTAAGAATGTTGA
AAAGAAGGATCCAACAGGTGCCAAGGTCACCAAGTCTGCAGCCAAGAAGA
GTGAATCG
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