CX294745
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THS_PYRHO (Thermosome subunit OS=Pyrococcus horikoshii GN=ths PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.931e-31 Identity = 76/180 (42.22%), Postives = 112/180 (62.22%), Query Frame = 2 Query: 68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIKLMKDESQNE 607 I ++G K AV++++RG ++++DE+ERAL DAI VK LE ++AGGGA E LS+ L+ A +G +EQLA+ FAE+L +IP+ LA NA D E + K+ A H K+ ++G+D+ +G + +E GVIEP K + I+ +EAAI ILRIDD+I K E + E Sbjct: 361 IFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAIKVVKDILEDGKIIAGGGASEIELSIKLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAH--------KEKGQTIGIDVYEGEPADMMERGVIEPVRVKKQAIKSASEAAIMILRIDDVIAASKLEKEKE 532
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSA_METTH (Thermosome subunit alpha OS=Methanobacterium thermoautotrophicum GN=thsA PE=3 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 5.259e-29 Identity = 77/168 (45.83%), Postives = 102/168 (60.71%), Query Frame = 2 Query: 74 IKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI 577 I+ + A+S+ILRG+ ++ +EMERAL DAI V TLE VVAGGGA E ++ L A T+ REQLA++ FA++L I+PK LA NA D+ +++ LRA H + MG+D+ G I + EAGVIEP K + IQ EAA ILRIDDMI Sbjct: 356 IEECRDPKAISIILRGSTKHVAEEMERALEDAIGVVASTLEDREVVAGGGAPEVEIARKLREYADTISGREQLAVSAFADALEIVPKTLAENAGLDSIDVLVDLRAAHEES---------PYMGIDVFDGNIVDMKEAGVIEPQRVKKQAIQSAAEAAEMILRIDDMI 514
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSA_ARCFU (Thermosome subunit alpha OS=Archaeoglobus fulgidus GN=thsA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.259e-29 Identity = 71/170 (41.76%), Postives = 104/170 (61.18%), Query Frame = 2 Query: 68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI 577 + I+G K AV++++RG +++++DE+ER+L DAI VK LES VVAGGGA E +++ + A TLG REQLA FA +L +IP+ LA N+ D +++ +LR H +T + G+D+ G + E GV+EP K + I TE AI ILRIDD+I Sbjct: 361 VFIEGCKNPKAVTILIRGGSEHVVDEVERSLQDAIKVVKTALESGKVVAGGGAPEIEVALKIRDWAPTLGGREQLAAEAFASALEVIPRALAENSGLDPIDILVELRKAHEEGKT--------TYGVDVFSGEVACMKERGVLEPLKVKTQAITSATEVAIMILRIDDVI 522
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THS_METKA (Thermosome subunit OS=Methanopyrus kandleri GN=ths PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 8.971e-29 Identity = 74/183 (40.44%), Postives = 109/183 (59.56%), Query Frame = 2 Query: 68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI---KLMKDESQNE 607 I ++G K AV++++RG ++++DE ERA+ DAI V LE VVAGGGA E ++ L A + REQLA+ FA++L IIP+ LA N+ D +++ +LRA H Q A G+D+ G +++ LE GV+EP K + + TEAA ILRIDD+I +L K+E + E Sbjct: 363 IFVEGCKDPKAVTILIRGGTEHVVDEAERAIEDAIGVVAAALEDGKVVAGGGAPEVEVARQLRDFADGVEGREQLAVEAFADALEIIPRTLAENSGLDPIDVLVQLRAKHEDGQVTA--------GIDVYDGDVKDMLEEGVVEPLRVKTQALASATEAAEMILRIDDVIAARELSKEEEEEE 537
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSB_THEK1 (Thermosome subunit beta OS=Thermococcus sp. (strain KS-1) GN=thsB PE=3 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 8.971e-29 Identity = 73/180 (40.56%), Postives = 108/180 (60.00%), Query Frame = 2 Query: 68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIKLMKDESQNE 607 I ++G K AV++++RG ++++DE+ERAL DA+ VK +E +VA GGA E LS+ L+ A +G +EQLA+ FAE+L +IP+ LA NA D E + K+ A H K+ ++G+D+ +G + LE GVI P + I+ +EAAI ILRIDD+I K E E Sbjct: 361 IFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELSIRLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAH--------KEKGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIKSASEAAIMILRIDDVIAASKLEKDKE 532
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THS1_HALVO (Thermosome subunit 1 OS=Halobacterium volcanii GN=cct1 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 8.971e-29 Identity = 71/170 (41.76%), Postives = 104/170 (61.18%), Query Frame = 2 Query: 68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI 577 I ++ + +V+LILRG ++++DE+ERA+ D++ V+ TLE V+ GGGA E+ LS+ L A ++G REQLA+ FAE+L IIP+ LA NA D + + LR+ H + A GLD G + + E GV+EP K + I+ TEAA+ ILRIDD+I Sbjct: 359 IFVEDVEDAKSVTLILRGGTEHVVDELERAIEDSLGVVRTTLEDGKVLPGGGAPETELSLQLREFADSVGGREQLAVEAFAEALDIIPRTLAENAGLDPIDSLVDLRSRHDGGEFAA--------GLDAYTGEVIDMEEEGVVEPLRVKTQAIESATEAAVMILRIDDVI 520
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSB_PYRKO (Thermosome subunit beta OS=Pyrococcus kodakaraensis GN=thsB PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.998e-28 Identity = 72/180 (40.00%), Postives = 108/180 (60.00%), Query Frame = 2 Query: 68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIKLMKDESQNE 607 I ++G K AV++++RG ++++DE+ERAL DA+ VK +E +VA GGA E L++ L+ A +G +EQLA+ FAE+L +IP+ LA NA D E + K+ A H K+ ++G+D+ +G + LE GVI P + I+ +EAAI ILRIDD+I K E E Sbjct: 361 IFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELAIRLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAH--------KEKGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIKSASEAAIMILRIDDVIAASKLEKDKE 532
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSB_METTH (Thermosome subunit beta OS=Methanobacterium thermoautotrophicum GN=thsB PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.409e-28 Identity = 74/180 (41.11%), Postives = 108/180 (60.00%), Query Frame = 2 Query: 68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIKLMKDESQNE 607 I ++ K AV++++RG+ ++++ E+ERA+ DAI V T+E VVAGGGA E ++ L+ A ++ REQLA++ FAE+L I+PK LA NA D+ +++ LRA H + + MG+D+ G I + EAGVIEP K + IQ EAA ILRIDD+I S E Sbjct: 354 IFVEECKEPKAVTILVRGSTEHVVSEVERAIEDAIGVVAATVEDGKVVAGGGAPEIEIAKRLKDYADSISGREQLAVSAFAEALEIVPKTLAENAGLDSIDVLVDLRAAHEES---------TYMGIDVFDGKIVDMKEAGVIEPHRVKKQAIQSAAEAAEMILRIDDVIAASSSGSSEE 524
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSA_THEK1 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.815e-28 Identity = 68/170 (40.00%), Postives = 104/170 (61.18%), Query Frame = 2 Query: 68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI 577 I ++G K AV++++RG ++++DE+ERAL DA+ VK +E V+ GGA E L++ L+ A +G +E LA+ FA++L IIPK LA NA D E++ K+ + H K +G+D+ +G + LE G+IEP K + I+ +EAAI ILRIDD+I Sbjct: 361 IFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEH--------KNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVI 522
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSA_PYRKO (Thermosome subunit alpha OS=Pyrococcus kodakaraensis GN=thsA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.815e-28 Identity = 68/170 (40.00%), Postives = 104/170 (61.18%), Query Frame = 2 Query: 68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI 577 I ++G K AV++++RG ++++DE+ERAL DA+ VK +E V+ GGA E L++ L+ A +G +E LA+ FA++L IIPK LA NA D E++ K+ + H K +G+D+ +G + LE G+IEP K + I+ +EAAI ILRIDD+I Sbjct: 361 IFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEH--------KNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVI 522 The following BLAST results are available for this feature:
BLAST of CX294745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294745 ID=CX294745; Name=CX294745; organism=Citrus clementina; type=EST; length=609bpback to top |