CX294745

Overview
NameCX294745
Unique NameCX294745
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length609
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THS_PYRHO (Thermosome subunit OS=Pyrococcus horikoshii GN=ths PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.931e-31
Identity = 76/180 (42.22%), Postives = 112/180 (62.22%), Query Frame = 2
Query:   68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIKLMKDESQNE 607
            I ++G K   AV++++RG  ++++DE+ERAL DAI  VK  LE   ++AGGGA E  LS+ L+  A  +G +EQLA+  FAE+L +IP+ LA NA  D  E + K+ A H        K+   ++G+D+ +G   + +E GVIEP   K + I+  +EAAI ILRIDD+I   K E + E
Sbjct:  361 IFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAIKVVKDILEDGKIIAGGGASEIELSIKLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAH--------KEKGQTIGIDVYEGEPADMMERGVIEPVRVKKQAIKSASEAAIMILRIDDVIAASKLEKEKE 532          
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSA_METTH (Thermosome subunit alpha OS=Methanobacterium thermoautotrophicum GN=thsA PE=3 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 5.259e-29
Identity = 77/168 (45.83%), Postives = 102/168 (60.71%), Query Frame = 2
Query:   74 IKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI 577
            I+  +   A+S+ILRG+  ++ +EMERAL DAI  V  TLE   VVAGGGA E  ++  L   A T+  REQLA++ FA++L I+PK LA NA  D+ +++  LRA H  +           MG+D+  G I +  EAGVIEP   K + IQ   EAA  ILRIDDMI
Sbjct:  356 IEECRDPKAISIILRGSTKHVAEEMERALEDAIGVVASTLEDREVVAGGGAPEVEIARKLREYADTISGREQLAVSAFADALEIVPKTLAENAGLDSIDVLVDLRAAHEES---------PYMGIDVFDGNIVDMKEAGVIEPQRVKKQAIQSAAEAAEMILRIDDMI 514          
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSA_ARCFU (Thermosome subunit alpha OS=Archaeoglobus fulgidus GN=thsA PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.259e-29
Identity = 71/170 (41.76%), Postives = 104/170 (61.18%), Query Frame = 2
Query:   68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI 577
            + I+G K   AV++++RG +++++DE+ER+L DAI  VK  LES  VVAGGGA E  +++ +   A TLG REQLA   FA +L +IP+ LA N+  D  +++ +LR  H   +T        + G+D+  G +    E GV+EP   K + I   TE AI ILRIDD+I
Sbjct:  361 VFIEGCKNPKAVTILIRGGSEHVVDEVERSLQDAIKVVKTALESGKVVAGGGAPEIEVALKIRDWAPTLGGREQLAAEAFASALEVIPRALAENSGLDPIDILVELRKAHEEGKT--------TYGVDVFSGEVACMKERGVLEPLKVKTQAITSATEVAIMILRIDDVI 522          
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THS_METKA (Thermosome subunit OS=Methanopyrus kandleri GN=ths PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.971e-29
Identity = 74/183 (40.44%), Postives = 109/183 (59.56%), Query Frame = 2
Query:   68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI---KLMKDESQNE 607
            I ++G K   AV++++RG  ++++DE ERA+ DAI  V   LE   VVAGGGA E  ++  L   A  +  REQLA+  FA++L IIP+ LA N+  D  +++ +LRA H   Q  A        G+D+  G +++ LE GV+EP   K + +   TEAA  ILRIDD+I   +L K+E + E
Sbjct:  363 IFVEGCKDPKAVTILIRGGTEHVVDEAERAIEDAIGVVAAALEDGKVVAGGGAPEVEVARQLRDFADGVEGREQLAVEAFADALEIIPRTLAENSGLDPIDVLVQLRAKHEDGQVTA--------GIDVYDGDVKDMLEEGVVEPLRVKTQALASATEAAEMILRIDDVIAARELSKEEEEEE 537          
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSB_THEK1 (Thermosome subunit beta OS=Thermococcus sp. (strain KS-1) GN=thsB PE=3 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 8.971e-29
Identity = 73/180 (40.56%), Postives = 108/180 (60.00%), Query Frame = 2
Query:   68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIKLMKDESQNE 607
            I ++G K   AV++++RG  ++++DE+ERAL DA+  VK  +E   +VA GGA E  LS+ L+  A  +G +EQLA+  FAE+L +IP+ LA NA  D  E + K+ A H        K+   ++G+D+ +G   + LE GVI P     + I+  +EAAI ILRIDD+I   K E   E
Sbjct:  361 IFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELSIRLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAH--------KEKGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIKSASEAAIMILRIDDVIAASKLEKDKE 532          
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THS1_HALVO (Thermosome subunit 1 OS=Halobacterium volcanii GN=cct1 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.971e-29
Identity = 71/170 (41.76%), Postives = 104/170 (61.18%), Query Frame = 2
Query:   68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI 577
            I ++  +   +V+LILRG  ++++DE+ERA+ D++  V+ TLE   V+ GGGA E+ LS+ L   A ++G REQLA+  FAE+L IIP+ LA NA  D  + +  LR+ H   +  A        GLD   G + +  E GV+EP   K + I+  TEAA+ ILRIDD+I
Sbjct:  359 IFVEDVEDAKSVTLILRGGTEHVVDELERAIEDSLGVVRTTLEDGKVLPGGGAPETELSLQLREFADSVGGREQLAVEAFAEALDIIPRTLAENAGLDPIDSLVDLRSRHDGGEFAA--------GLDAYTGEVIDMEEEGVVEPLRVKTQAIESATEAAVMILRIDDVI 520          
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSB_PYRKO (Thermosome subunit beta OS=Pyrococcus kodakaraensis GN=thsB PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.998e-28
Identity = 72/180 (40.00%), Postives = 108/180 (60.00%), Query Frame = 2
Query:   68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIKLMKDESQNE 607
            I ++G K   AV++++RG  ++++DE+ERAL DA+  VK  +E   +VA GGA E  L++ L+  A  +G +EQLA+  FAE+L +IP+ LA NA  D  E + K+ A H        K+   ++G+D+ +G   + LE GVI P     + I+  +EAAI ILRIDD+I   K E   E
Sbjct:  361 IFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELAIRLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAH--------KEKGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIKSASEAAIMILRIDDVIAASKLEKDKE 532          
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSB_METTH (Thermosome subunit beta OS=Methanobacterium thermoautotrophicum GN=thsB PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.409e-28
Identity = 74/180 (41.11%), Postives = 108/180 (60.00%), Query Frame = 2
Query:   68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIKLMKDESQNE 607
            I ++  K   AV++++RG+ ++++ E+ERA+ DAI  V  T+E   VVAGGGA E  ++  L+  A ++  REQLA++ FAE+L I+PK LA NA  D+ +++  LRA H  +         + MG+D+  G I +  EAGVIEP   K + IQ   EAA  ILRIDD+I      S  E
Sbjct:  354 IFVEECKEPKAVTILVRGSTEHVVSEVERAIEDAIGVVAATVEDGKVVAGGGAPEIEIAKRLKDYADSISGREQLAVSAFAEALEIVPKTLAENAGLDSIDVLVDLRAAHEES---------TYMGIDVFDGKIVDMKEAGVIEPHRVKKQAIQSAAEAAEMILRIDDVIAASSSGSSEE 524          
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSA_THEK1 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.815e-28
Identity = 68/170 (40.00%), Postives = 104/170 (61.18%), Query Frame = 2
Query:   68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI 577
            I ++G K   AV++++RG  ++++DE+ERAL DA+  VK  +E   V+  GGA E  L++ L+  A  +G +E LA+  FA++L IIPK LA NA  D  E++ K+ + H        K     +G+D+ +G   + LE G+IEP   K + I+  +EAAI ILRIDD+I
Sbjct:  361 IFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEH--------KNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVI 522          
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSA_PYRKO (Thermosome subunit alpha OS=Pyrococcus kodakaraensis GN=thsA PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.815e-28
Identity = 68/170 (40.00%), Postives = 104/170 (61.18%), Query Frame = 2
Query:   68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI 577
            I ++G K   AV++++RG  ++++DE+ERAL DA+  VK  +E   V+  GGA E  L++ L+  A  +G +E LA+  FA++L IIPK LA NA  D  E++ K+ + H        K     +G+D+ +G   + LE G+IEP   K + I+  +EAAI ILRIDD+I
Sbjct:  361 IFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEH--------KNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVI 522          
The following BLAST results are available for this feature:
BLAST of CX294745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
THS_PYRHO1.931e-3142.22Thermosome subunit OS=Pyrococcus horikoshii GN=ths... [more]
THSA_METTH5.259e-2945.83Thermosome subunit alpha OS=Methanobacterium therm... [more]
THSA_ARCFU5.259e-2941.76Thermosome subunit alpha OS=Archaeoglobus fulgidus... [more]
THS_METKA8.971e-2940.44Thermosome subunit OS=Methanopyrus kandleri GN=ths... [more]
THSB_THEK18.971e-2940.56Thermosome subunit beta OS=Thermococcus sp. (strai... [more]
THS1_HALVO8.971e-2941.76Thermosome subunit 1 OS=Halobacterium volcanii GN=... [more]
THSB_PYRKO1.998e-2840.00Thermosome subunit beta OS=Pyrococcus kodakaraensi... [more]
THSB_METTH3.409e-2841.11Thermosome subunit beta OS=Methanobacterium thermo... [more]
THSA_THEK15.815e-2840.00Thermosome subunit alpha OS=Thermococcus sp. (stra... [more]
THSA_PYRKO5.815e-2840.00Thermosome subunit alpha OS=Pyrococcus kodakaraens... [more]

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Properties
Property NameValue
Genbank descriptionC05055D11SK FlavSen1 Citrus clementina cDNA clone C05055D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294745 ID=CX294745; Name=CX294745; organism=Citrus clementina; type=EST; length=609bp
ATTTGATTCGTCACTTCTTGGATCTGCTGATGAAGTGGTAGAAGAGCGTG
TTGCCGATGATGATGTGATTATGATAAAGGGGACTAAAACTACAAGTGCG
GTTTCCTTGATACTTAGAGGAGCAAATGACTATATGCTTGATGAGATGGA
GAGAGCCCTGCATGATGCTATATGTACTGTCAAGAGGACCCTTGAATCCA
ACACGGTGGTGGCAGGTGGAGGTGCAGTTGAGTCTGCCTTGTCTGTCTAT
TTGGAATACCTAGCTACAACGCTAGGATCCCGAGAGCAGTTGGCACTTGC
TGAGTTTGCTGAATCTTTATTAATCATACCAAAGGTGCTTGCTGTAAATG
CTGCTAAGGATGCGACTGAGTTGGTTGCAAAACTACGGGCCTACCACCAT
GCTGCACAAACGAAGGCTGATAAAAAACACTTGTCTAGCATGGGACTGGA
TCTTGCAAAGGGGACCATTCGTAACAACTTGGAAGCTGGAGTCATAGAGC
CTGCAATGAGCAAAGTGAAAATTATTCAGTTTGNCACGGAAGCAGCAATC
ACAATTCTTCGTATTGATGATATGATCAAGCTTATGAAAGATGAAAGTCA
GAATGAAGA
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