CX294745

Overview
NameCX294745
Unique NameCX294745
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length609
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14336 contig Ccv1_Contig14336:1152..1760. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSB_SULAC (Thermosome subunit beta OS=Sulfolobus acidocaldarius GN=thsB PE=3 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 2.701e-25
Identity = 67/174 (38.51%), Postives = 103/174 (59.20%), Query Frame = 2
Query:   68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIKLMK 589
            + I+G K   AVS+++RG  + ++DE ERAL DA+ TV   +     +AGGGAVE+ ++  L   A  +G +EQLA+  +A +L  +  +L  N   D  EL+ KLR+ H   + + +K H    G+++  G I++    GVIEPA+ K+  I+  TEA+  ILRIDD+I   K
Sbjct:  368 VFIEGAKNPKAVSILIRGGLERVVDETERALRDALGTVADVVRDGRAIAGGGAVETEIAKRLRKYAPQVGGKEQLAIEAYANALESLVMILIENGGFDPIELLVKLRSAH---ENETNKWH----GINVYTGQIQDMWSLGVIEPAVVKMNAIKAATEASTLILRIDDLISAGK 534          
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSA_THEAC (Thermosome subunit alpha OS=Thermoplasma acidophilum GN=thsA PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.528e-25
Identity = 68/172 (39.53%), Postives = 99/172 (57.56%), Query Frame = 2
Query:   74 IKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIKLMK 589
            + G K   AVS+++RG  D+++ E+ERAL+DAI  V  T E    + GGGAVE+ L++ L   A ++G REQLA+  FA++L IIP+ LA NA  D    + KL+A H        +K   S+G+DL    + +    GV++P   K   ++   E A  ILRIDD+I   K
Sbjct:  360 VMGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKAEH--------EKGRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVIASKK 523          
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSA_SULSH (Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.528e-25
Identity = 65/171 (38.01%), Postives = 105/171 (61.40%), Query Frame = 2
Query:   68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEA-GVIEPAMSKVKIIQFXTEAAITILRIDDMI 577
            + I+G K   AV+++LRG+ND  LDE ER+++DA+  ++  L    ++ GGGA+E  L++ L   A ++G +EQLA+  FA++L  IP +LA  A  +A   +  LRA H         K L++ G+D+  G I +++ A  +IEP   K ++++  TEAA  IL+IDD+I
Sbjct:  366 VFIEGAKNLKAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGGAIELELAMKLREYARSVGGKEQLAIEAFADALEEIPTILAETAGLEAISALMDLRARH--------AKGLTNTGVDVIGGKIVDDVYALNIIEPIRVKAQVLKSATEAATAILKIDDLI 528          
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPH_SCHPO (Probable T-complex protein 1 subunit eta OS=Schizosaccharomyces pombe GN=cct7 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.528e-25
Identity = 69/170 (40.59%), Postives = 94/170 (55.29%), Query Frame = 2
Query:   71 MIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIK 580
            + +G       +LILRG  D  + E+ER+LHDAI  VK  L++N VVAGGGA E  LS YL   + T+  ++Q  +A FA SL +IP+ L  NA  D+T ++ KLR  H   +  A        G+D+    + NN E  V EP+  K   I   TEAA  IL +D+ IK
Sbjct:  365 LFEGCPKAKTCTLILRGGADQFIAEVERSLHDAIMIVKHALKNNLVVAGGGACEMELSKYLRDYSLTISGKQQNFIAAFARSLEVIPRQLCDNAGFDSTNILNKLRMQHAKGEMWA--------GVDMDSEGVANNFEKFVWEPSTVKSNAILSATEAATLILSVDETIK 526          
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSA_SULSO (Thermosome subunit alpha OS=Sulfolobus solfataricus GN=thsA PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 4.607e-25
Identity = 66/171 (38.60%), Postives = 105/171 (61.40%), Query Frame = 2
Query:   68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEA-GVIEPAMSKVKIIQFXTEAAITILRIDDMI 577
            + I+G K   AV+++LRG+ND  LDE ER+++DA+  ++  L    ++ GGGA+E  L++ L   A ++G +EQLA+  FA++L  IP +LA  A  +A   +  LRA H         K LS+ G+D+  G I +++ A  +IEP   K ++++  TEAA  IL+IDD+I
Sbjct:  366 VFIEGAKNLKAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGGAIELELAMKLREYARSVGGKEQLAIEAFADALEEIPLILAETAGLEAISSLMDLRARH--------AKGLSNTGVDVIGGKIVDDVYALNIIEPIRVKSQVLKSATEAATAILKIDDLI 528          
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPH_PONAB (T-complex protein 1 subunit eta OS=Pongo abelii GN=CCT7 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.607e-25
Identity = 65/167 (38.92%), Postives = 98/167 (58.68%), Query Frame = 2
Query:   80 GTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIK 580
            G       + ILRG  +  ++E ER+LHDAI  V+R +++++VVAGGGA+E  LS YL   + T+  ++QL +  +A++L IIP+ L  NA  DAT ++ KLRA H    T          G+D+    I +N EA V EPAM ++  +   +EAA  I+ +D+ IK
Sbjct:  363 GCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGT--------WYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIK 521          
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPH_HUMAN (T-complex protein 1 subunit eta OS=Homo sapiens GN=CCT7 PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 4.607e-25
Identity = 65/167 (38.92%), Postives = 98/167 (58.68%), Query Frame = 2
Query:   80 GTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIK 580
            G       + ILRG  +  ++E ER+LHDAI  V+R +++++VVAGGGA+E  LS YL   + T+  ++QL +  +A++L IIP+ L  NA  DAT ++ KLRA H    T          G+D+    I +N EA V EPAM ++  +   +EAA  I+ +D+ IK
Sbjct:  363 GCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGT--------WYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIK 521          
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSB_HALSA (Thermosome subunit beta OS=Halobacterium salinarium GN=thsB PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 6.017e-25
Identity = 62/159 (38.99%), Postives = 100/159 (62.89%), Query Frame = 2
Query:  101 VSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI 577
            V+L+LRG+ D+++DE+ER + DA+    +TL    V+ GGGA E  ++  L   A ++  REQLA+  FA+SL ++P+VLA NA  D+ + +  LR+ H       D +H+   GL++  G + +  EAGV+EPA +K + +   +EAA  +L+IDD+I
Sbjct:  374 VTLLLRGSTDHVVDELERGVSDALDVSAQTLSDGRVLPGGGATEVEVASRLRDFADSVSGREQLAVEAFADSLELVPRVLAENAGLDSIDTLVDLRSAHE----NDDDEHI---GLNVLSGDLEDTFEAGVVEPAHAKEQAVTSASEAANLVLKIDDII 525          
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THS2_HALVO (Thermosome subunit 2 OS=Halobacterium volcanii GN=cct2 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.017e-25
Identity = 61/159 (38.36%), Postives = 100/159 (62.89%), Query Frame = 2
Query:  101 VSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI 577
            V+L+LRG+ D+++DE+ER + DA+  V  T+    V+AGGGA+E  L+  L   A ++  REQLA+  +A++L ++P+VLA NA  D+ + +  LRA H   Q +A        GL++  G + +  +AGV+E A +K + +   +EAA  +L+IDD+I
Sbjct:  373 VTLLLRGSTDHVVDELERGVQDALDVVASTVADGRVLAGGGAIEVELASRLRNYADSVSGREQLAVEAYADALELVPRVLAENAGLDSIDTLVDLRAAHEDGQVRA--------GLNVFTGEVEDAFDAGVVETAHAKEQAVASASEAANLVLKIDDII 523          
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSB_SULTO (Thermosome subunit beta OS=Sulfolobus tokodaii GN=thsB PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.026e-24
Identity = 65/170 (38.24%), Postives = 102/170 (60.00%), Query Frame = 2
Query:   68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI 577
            + ++G K   AVS+++RG  + ++DE ERAL DA+ TV   +     VAGGGAVE  ++  L   A  +G +EQLA+  +A +L  +  +L  N   D  +L+ KLR+ H   + +A+K +    G+++  G + +  + GVIEPA+ K+  I+  TEAA  ILRIDD+I
Sbjct:  368 VFVEGAKNPKAVSILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVELEIAKRLRKYAPQIGGKEQLAIEAYASALENLVMILIENGGYDPIDLLVKLRSAH---ENEANKWY----GINVFTGQVEDMWKLGVIEPAVVKMNAIKAATEAATLILRIDDLI 530          
The following BLAST results are available for this feature:
BLAST of CX294745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
THSB_SULAC2.701e-2538.51Thermosome subunit beta OS=Sulfolobus acidocaldari... [more]
THSA_THEAC3.528e-2539.53Thermosome subunit alpha OS=Thermoplasma acidophil... [more]
THSA_SULSH3.528e-2538.01Thermosome subunit alpha OS=Sulfolobus shibatae GN... [more]
TCPH_SCHPO3.528e-2540.59Probable T-complex protein 1 subunit eta OS=Schizo... [more]
THSA_SULSO4.607e-2538.60Thermosome subunit alpha OS=Sulfolobus solfataricu... [more]
TCPH_PONAB4.607e-2538.92T-complex protein 1 subunit eta OS=Pongo abelii GN... [more]
TCPH_HUMAN4.607e-2538.92T-complex protein 1 subunit eta OS=Homo sapiens GN... [more]
THSB_HALSA6.017e-2538.99Thermosome subunit beta OS=Halobacterium salinariu... [more]
THS2_HALVO6.017e-2538.36Thermosome subunit 2 OS=Halobacterium volcanii GN=... [more]
THSB_SULTO1.026e-2438.24Thermosome subunit beta OS=Sulfolobus tokodaii GN=... [more]

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Properties
Property NameValue
Genbank descriptionC05055D11SK FlavSen1 Citrus clementina cDNA clone C05055D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294745 ID=CX294745; Name=CX294745; organism=Citrus clementina; type=EST; length=609bp
ATTTGATTCGTCACTTCTTGGATCTGCTGATGAAGTGGTAGAAGAGCGTG
TTGCCGATGATGATGTGATTATGATAAAGGGGACTAAAACTACAAGTGCG
GTTTCCTTGATACTTAGAGGAGCAAATGACTATATGCTTGATGAGATGGA
GAGAGCCCTGCATGATGCTATATGTACTGTCAAGAGGACCCTTGAATCCA
ACACGGTGGTGGCAGGTGGAGGTGCAGTTGAGTCTGCCTTGTCTGTCTAT
TTGGAATACCTAGCTACAACGCTAGGATCCCGAGAGCAGTTGGCACTTGC
TGAGTTTGCTGAATCTTTATTAATCATACCAAAGGTGCTTGCTGTAAATG
CTGCTAAGGATGCGACTGAGTTGGTTGCAAAACTACGGGCCTACCACCAT
GCTGCACAAACGAAGGCTGATAAAAAACACTTGTCTAGCATGGGACTGGA
TCTTGCAAAGGGGACCATTCGTAACAACTTGGAAGCTGGAGTCATAGAGC
CTGCAATGAGCAAAGTGAAAATTATTCAGTTTGNCACGGAAGCAGCAATC
ACAATTCTTCGTATTGATGATATGATCAAGCTTATGAAAGATGAAAGTCA
GAATGAAGA
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