CX294745
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSB_SULAC (Thermosome subunit beta OS=Sulfolobus acidocaldarius GN=thsB PE=3 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 2.701e-25 Identity = 67/174 (38.51%), Postives = 103/174 (59.20%), Query Frame = 2 Query: 68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIKLMK 589 + I+G K AVS+++RG + ++DE ERAL DA+ TV + +AGGGAVE+ ++ L A +G +EQLA+ +A +L + +L N D EL+ KLR+ H + + +K H G+++ G I++ GVIEPA+ K+ I+ TEA+ ILRIDD+I K Sbjct: 368 VFIEGAKNPKAVSILIRGGLERVVDETERALRDALGTVADVVRDGRAIAGGGAVETEIAKRLRKYAPQVGGKEQLAIEAYANALESLVMILIENGGFDPIELLVKLRSAH---ENETNKWH----GINVYTGQIQDMWSLGVIEPAVVKMNAIKAATEASTLILRIDDLISAGK 534
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSA_THEAC (Thermosome subunit alpha OS=Thermoplasma acidophilum GN=thsA PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.528e-25 Identity = 68/172 (39.53%), Postives = 99/172 (57.56%), Query Frame = 2 Query: 74 IKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIKLMK 589 + G K AVS+++RG D+++ E+ERAL+DAI V T E + GGGAVE+ L++ L A ++G REQLA+ FA++L IIP+ LA NA D + KL+A H +K S+G+DL + + GV++P K ++ E A ILRIDD+I K Sbjct: 360 VMGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKAEH--------EKGRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVIASKK 523
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSA_SULSH (Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.528e-25 Identity = 65/171 (38.01%), Postives = 105/171 (61.40%), Query Frame = 2 Query: 68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEA-GVIEPAMSKVKIIQFXTEAAITILRIDDMI 577 + I+G K AV+++LRG+ND LDE ER+++DA+ ++ L ++ GGGA+E L++ L A ++G +EQLA+ FA++L IP +LA A +A + LRA H K L++ G+D+ G I +++ A +IEP K ++++ TEAA IL+IDD+I Sbjct: 366 VFIEGAKNLKAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGGAIELELAMKLREYARSVGGKEQLAIEAFADALEEIPTILAETAGLEAISALMDLRARH--------AKGLTNTGVDVIGGKIVDDVYALNIIEPIRVKAQVLKSATEAATAILKIDDLI 528
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPH_SCHPO (Probable T-complex protein 1 subunit eta OS=Schizosaccharomyces pombe GN=cct7 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.528e-25 Identity = 69/170 (40.59%), Postives = 94/170 (55.29%), Query Frame = 2 Query: 71 MIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIK 580 + +G +LILRG D + E+ER+LHDAI VK L++N VVAGGGA E LS YL + T+ ++Q +A FA SL +IP+ L NA D+T ++ KLR H + A G+D+ + NN E V EP+ K I TEAA IL +D+ IK Sbjct: 365 LFEGCPKAKTCTLILRGGADQFIAEVERSLHDAIMIVKHALKNNLVVAGGGACEMELSKYLRDYSLTISGKQQNFIAAFARSLEVIPRQLCDNAGFDSTNILNKLRMQHAKGEMWA--------GVDMDSEGVANNFEKFVWEPSTVKSNAILSATEAATLILSVDETIK 526
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSA_SULSO (Thermosome subunit alpha OS=Sulfolobus solfataricus GN=thsA PE=3 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 4.607e-25 Identity = 66/171 (38.60%), Postives = 105/171 (61.40%), Query Frame = 2 Query: 68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEA-GVIEPAMSKVKIIQFXTEAAITILRIDDMI 577 + I+G K AV+++LRG+ND LDE ER+++DA+ ++ L ++ GGGA+E L++ L A ++G +EQLA+ FA++L IP +LA A +A + LRA H K LS+ G+D+ G I +++ A +IEP K ++++ TEAA IL+IDD+I Sbjct: 366 VFIEGAKNLKAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGGAIELELAMKLREYARSVGGKEQLAIEAFADALEEIPLILAETAGLEAISSLMDLRARH--------AKGLSNTGVDVIGGKIVDDVYALNIIEPIRVKSQVLKSATEAATAILKIDDLI 528
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPH_PONAB (T-complex protein 1 subunit eta OS=Pongo abelii GN=CCT7 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.607e-25 Identity = 65/167 (38.92%), Postives = 98/167 (58.68%), Query Frame = 2 Query: 80 GTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIK 580 G + ILRG + ++E ER+LHDAI V+R +++++VVAGGGA+E LS YL + T+ ++QL + +A++L IIP+ L NA DAT ++ KLRA H T G+D+ I +N EA V EPAM ++ + +EAA I+ +D+ IK Sbjct: 363 GCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGT--------WYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIK 521
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPH_HUMAN (T-complex protein 1 subunit eta OS=Homo sapiens GN=CCT7 PE=1 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 4.607e-25 Identity = 65/167 (38.92%), Postives = 98/167 (58.68%), Query Frame = 2 Query: 80 GTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIK 580 G + ILRG + ++E ER+LHDAI V+R +++++VVAGGGA+E LS YL + T+ ++QL + +A++L IIP+ L NA DAT ++ KLRA H T G+D+ I +N EA V EPAM ++ + +EAA I+ +D+ IK Sbjct: 363 GCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGT--------WYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIK 521
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSB_HALSA (Thermosome subunit beta OS=Halobacterium salinarium GN=thsB PE=3 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 6.017e-25 Identity = 62/159 (38.99%), Postives = 100/159 (62.89%), Query Frame = 2 Query: 101 VSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI 577 V+L+LRG+ D+++DE+ER + DA+ +TL V+ GGGA E ++ L A ++ REQLA+ FA+SL ++P+VLA NA D+ + + LR+ H D +H+ GL++ G + + EAGV+EPA +K + + +EAA +L+IDD+I Sbjct: 374 VTLLLRGSTDHVVDELERGVSDALDVSAQTLSDGRVLPGGGATEVEVASRLRDFADSVSGREQLAVEAFADSLELVPRVLAENAGLDSIDTLVDLRSAHE----NDDDEHI---GLNVLSGDLEDTFEAGVVEPAHAKEQAVTSASEAANLVLKIDDII 525
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THS2_HALVO (Thermosome subunit 2 OS=Halobacterium volcanii GN=cct2 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.017e-25 Identity = 61/159 (38.36%), Postives = 100/159 (62.89%), Query Frame = 2 Query: 101 VSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI 577 V+L+LRG+ D+++DE+ER + DA+ V T+ V+AGGGA+E L+ L A ++ REQLA+ +A++L ++P+VLA NA D+ + + LRA H Q +A GL++ G + + +AGV+E A +K + + +EAA +L+IDD+I Sbjct: 373 VTLLLRGSTDHVVDELERGVQDALDVVASTVADGRVLAGGGAIEVELASRLRNYADSVSGREQLAVEAYADALELVPRVLAENAGLDSIDTLVDLRAAHEDGQVRA--------GLNVFTGEVEDAFDAGVVETAHAKEQAVASASEAANLVLKIDDII 523
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSB_SULTO (Thermosome subunit beta OS=Sulfolobus tokodaii GN=thsB PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.026e-24 Identity = 65/170 (38.24%), Postives = 102/170 (60.00%), Query Frame = 2 Query: 68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI 577 + ++G K AVS+++RG + ++DE ERAL DA+ TV + VAGGGAVE ++ L A +G +EQLA+ +A +L + +L N D +L+ KLR+ H + +A+K + G+++ G + + + GVIEPA+ K+ I+ TEAA ILRIDD+I Sbjct: 368 VFVEGAKNPKAVSILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVELEIAKRLRKYAPQIGGKEQLAIEAYASALENLVMILIENGGYDPIDLLVKLRSAH---ENEANKWY----GINVFTGQVEDMWKLGVIEPAVVKMNAIKAATEAATLILRIDDLI 530 The following BLAST results are available for this feature:
BLAST of CX294745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294745 ID=CX294745; Name=CX294745; organism=Citrus clementina; type=EST; length=609bpback to top |