CX294745
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSB_ARCFU (Thermosome subunit beta OS=Archaeoglobus fulgidus GN=thsB PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.751e-24 Identity = 64/170 (37.65%), Postives = 97/170 (57.06%), Query Frame = 2 Query: 68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI 577 + + G K AV++++RG +++++E+ R + DA+ V +E VV G GA E +S+ L A +LG REQLA+ FA +L IIP+ LA NA D +++ +L+A H Q A G+D+ G + + E GV EP K + I TE A+ ILRIDD+I Sbjct: 361 VFVTGCKNPKAVTILVRGGTEHVVEEIARGIEDAVRAVACAVEDGKVVVGAGAPEIEVSLKLREWAPSLGGREQLAVEAFATALEIIPRTLAENAGLDPIDVLVELKAAHEKGQKYA--------GVDVDTGKVVDMKERGVFEPLRVKTQAIGSATEVAVMILRIDDII 522
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPH_BOVIN (T-complex protein 1 subunit eta OS=Bos taurus GN=CCT7 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.751e-24 Identity = 64/167 (38.32%), Postives = 98/167 (58.68%), Query Frame = 2 Query: 80 GTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIK 580 G ++ILRG + ++E ER+LHDAI V+R +++++VVAGGGA+E LS YL + T+ ++QL + +A++L IIP+ L NA DAT ++ KLRA H G+D+ I +N EA V EPAM ++ + +EAA I+ +D+ IK Sbjct: 363 GCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGG--------MWYGVDINTEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIK 521
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPH_MOUSE (T-complex protein 1 subunit eta OS=Mus musculus GN=Cct7 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.287e-24 Identity = 63/167 (37.72%), Postives = 98/167 (58.68%), Query Frame = 2 Query: 80 GTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIK 580 G ++ILRG + ++E ER+LHDAI V+R +++++VVAGGGA+E LS YL + T+ ++QL + +A++L IIP+ L NA DAT ++ KLRA H G+D+ I +N +A V EPAM ++ + +EAA I+ +D+ IK Sbjct: 363 GCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGG--------MWYGVDINNENIADNFQAFVWEPAMVRINALTAASEAACLIVSVDETIK 521
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSA_THEK8 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-8) GN=thsA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.986e-24 Identity = 67/180 (37.22%), Postives = 104/180 (57.78%), Query Frame = 2 Query: 68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI--KLMKDESQ 601 I ++G K AV++++RG ++++DE+ERAL DA+ VK +E V+ GGA E L++ ++ A +G +E LA+ FA++L IIPK LA NA D E++ K+ + H K +G+D+ G + LE G+I P + I+ AAI ILRIDD+I K+ K E + Sbjct: 361 IFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAISVDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEILVKVISEH--------KNKGLGIGIDVFAGEPADMLERGIIAPLRVTKQAIK-SARAAIMILRIDDVIAAKVSKPEGR 531
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPH_CHICK (T-complex protein 1 subunit eta OS=Gallus gallus GN=CCT7 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.094e-24 Identity = 63/167 (37.72%), Postives = 98/167 (58.68%), Query Frame = 2 Query: 80 GTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIK 580 G ++ILRG + ++E ER+LHDAI V+R +++++VVAGGGA+E LS YL + T+ ++QL + +A++L IIP+ L NA DAT ++ KLRA H G+D+ I +N EA V EPA+ ++ + +EAA I+ +D+ IK Sbjct: 363 GCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRAKHAQGG--------MWYGVDVNNEDIADNFEACVWEPAIVRINALTAASEAACLIVSVDETIK 521
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPB_BOVIN (T-complex protein 1 subunit beta OS=Bos taurus GN=CCT2 PE=2 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 6.653e-24 Identity = 61/171 (35.67%), Postives = 100/171 (58.48%), Query Frame = 2 Query: 68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIK 580 I G A +++LRGA +LDE ER+LHDA+C + +T++ + V GGG E ++ + LA+ +E +A+ +A++L ++P ++A NA D+ +LVA+LRA H +T A GLD+ +GTI + G+ E K +++ EAA ILR+D++IK Sbjct: 360 IHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTA--------GLDMKEGTIGDMSVLGITESFQVKRQVLLSAAEAAEVILRVDNIIK 522
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSB_DESMO (Thermosome subunit beta (Fragment) OS=Desulfurococcus mobilis GN=thsB PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.135e-23 Identity = 65/165 (39.39%), Postives = 95/165 (57.58%), Query Frame = 2 Query: 68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILR 562 + I+G K +VS+++RG + ++DE ER++ DA+ V L V+ GGGA E L+ ++ LAT +G +EQLA+ FA++L + L NA D ++V KLRA H + D K+LS +DLA G + N E GVIEP I+ TEAA I+R Sbjct: 345 VFIEGCKNPRSVSIVIRGGLERLVDEAERSIRDALSAVADALRDGKVIPGGGAAEIELAKHIRRLATRVGGKEQLAIEAFAKALEGLAVTLVENAGLDPIDMVMKLRAAHE----REDGKYLS---IDLATGDLVNMREKGVIEPVSILANAIKAGTEAATIIMR 502
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPB_MACFA (T-complex protein 1 subunit beta OS=Macaca fascicularis GN=CCT2 PE=2 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 1.135e-23 Identity = 61/171 (35.67%), Postives = 98/171 (57.31%), Query Frame = 2 Query: 68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIK 580 I G A +++LRGA +LDE ER+LHDA+C + +T++ + V GGG E ++ + LA +E +A+ +A++L ++P ++A NA D+ +LVA+LRA H T A GLD+ +GTI + G+ E K +++ EAA ILR+D++IK Sbjct: 360 IHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLANRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGNTTA--------GLDMREGTIGDMAILGITESFQVKRQVLLSAAEAAEVILRVDNIIK 522
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPB_HUMAN (T-complex protein 1 subunit beta OS=Homo sapiens GN=CCT2 PE=1 SV=4) HSP 1 Score: 109.768 bits (273), Expect = 1.135e-23 Identity = 61/171 (35.67%), Postives = 98/171 (57.31%), Query Frame = 2 Query: 68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIK 580 I G A +++LRGA +LDE ER+LHDA+C + +T++ + V GGG E ++ + LA +E +A+ +A++L ++P ++A NA D+ +LVA+LRA H T A GLD+ +GTI + G+ E K +++ EAA ILR+D++IK Sbjct: 360 IHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLANRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGNTTA--------GLDMREGTIGDMAILGITESFQVKRQVLLSAAEAAEVILRVDNIIK 522
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPB_DICDI (T-complex protein 1 subunit beta OS=Dictyostelium discoideum GN=cct2 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.482e-23 Identity = 61/179 (34.08%), Postives = 100/179 (55.87%), Query Frame = 2 Query: 68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIKLMKDESQN 604 I G + A +++LRGA ++L+E ER++HDA+C + T+ V G G E +S ++ LA ++ +A+ FA++L IP ++A NA D++ELV++L+A HH KA GL++ G I N E GVIE K +++ EAA I+R+DD+++ + N Sbjct: 359 IRFSGIPSGEACTIVLRGATSHILEEAERSIHDALCVLAVTVAETRTVLGAGCSEMIMSKAVDELAAITPGKKAMAIESFAKALRQIPTIIANNAGYDSSELVSQLKAAHHQGDKKA--------GLNMRDGCIGNAEELGVIESFKVKQQVLVSAHEAAEMIMRVDDILRAAPRQRSN 529 The following BLAST results are available for this feature:
BLAST of CX294745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294745 ID=CX294745; Name=CX294745; organism=Citrus clementina; type=EST; length=609bpback to top |