CX294745
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPB_CAEEL (T-complex protein 1 subunit beta OS=Caenorhabditis elegans GN=cct-2 PE=2 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 1.482e-23 Identity = 63/171 (36.84%), Postives = 97/171 (56.73%), Query Frame = 2 Query: 68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIK 580 + G K A S++LRGA +LDE ER+LHDA+C + ++ + VAG GA E +S + A + +E LA+ F +L +P ++ NA D+ ELV +LRA H A+ +H +MG+D+ KG + + + GVIE K+ ++ EA ILR+DD+IK Sbjct: 354 LRFSGVKLGEACSVVLRGATQQILDESERSLHDALCVLVTHVKESKTVAGAGASEILMSSAIAVEAQKVAGKEALAVEAFGRALAQLPTIICDNAGLDSAELVTRLRAEH------ANGRH--NMGIDIEKGEVADVTKLGVIESYNVKLCMVSSAAEATEQILRVDDIIK 516
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPB_YEAST (T-complex protein 1 subunit beta OS=Saccharomyces cerevisiae GN=CCT2 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.528e-23 Identity = 60/171 (35.09%), Postives = 98/171 (57.31%), Query Frame = 2 Query: 68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIK 580 + G K A +++LRGA D LDE ER+LHDA+ + +T + V GGG E +S ++ A + ++ LA+ FA +L +P +LA NA D++ELV+KLR+ + +S+ GLDL GTI + + G++E K ++ +EAA +LR+D++I+ Sbjct: 354 LKFSGCKAGEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIY--------NGISTSGLDLNNGTIADMRQLGIVESYKLKRAVVSSASEAAEVLLRVDNIIR 516
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPB_MOUSE (T-complex protein 1 subunit beta OS=Mus musculus GN=Cct2 PE=1 SV=4) HSP 1 Score: 107.842 bits (268), Expect = 4.312e-23 Identity = 61/171 (35.67%), Postives = 96/171 (56.14%), Query Frame = 2 Query: 68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIK 580 I G A +++LRGA +LDE ER+LHDA+C + +T++ V GGG E ++ + LA +E +A+ FA++L ++P ++A NA D+ +LVA+LRA H A GLD+ +GTI + G+ E K +++ EAA ILR+D++IK Sbjct: 360 IHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDPRTVYGGGCSEMLMAHAVTQLANRTPGKEAVAMESFAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGHITA--------GLDMKEGTIGDMAVLGITESFQVKRQVLLSAAEAAEVILRVDNIIK 522
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPB_RAT (T-complex protein 1 subunit beta OS=Rattus norvegicus GN=Cct2 PE=1 SV=3) HSP 1 Score: 107.071 bits (266), Expect = 7.356e-23 Identity = 60/171 (35.09%), Postives = 98/171 (57.31%), Query Frame = 2 Query: 68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIK 580 I G A +++LRGA +LDE ER+LHDA+C + +T++ V GGG E ++ + LA+ +E +A+ FA++L ++P ++A NA D+ +LVA+LRA H + A GLD+ +G+I + G+ E K +++ EAA ILR+D++IK Sbjct: 360 IHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDPRTVYGGGCSEMLMAHAVTMLASRTPGKEAVAMESFAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGRITA--------GLDMKEGSIGDMAVLGITESFQVKRQVLLSAAEAAEVILRVDNIIK 522
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSB_SULSH (Thermosome subunit beta OS=Sulfolobus shibatae GN=thsB PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.639e-22 Identity = 61/170 (35.88%), Postives = 96/170 (56.47%), Query Frame = 2 Query: 68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI 577 + ++G K +VS+++RG + ++DE ERAL DA+ TV + VAGGGAVE ++ L A +G +EQLA+ +A ++ + +LA NA D + + +LR+ H K GL+L G + + GVIEPA+ K+ I+ TEA +LRIDD++ Sbjct: 367 VFVEGAKNPKSVSILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVEIEIAKRLRKYAPQVGGKEQLAIEAYANAIEGLIMILAENAGLDPIDKLMQLRSLHENETNK-------WYGLNLFTGNPEDMWKLGVIEPALVKMNAIKAATEAVTLVLRIDDIV 529
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPD_KLULA (T-complex protein 1 subunit delta OS=Kluyveromyces lactis GN=CCT4 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.639e-22 Identity = 63/194 (32.47%), Postives = 100/194 (51.55%), Query Frame = 2 Query: 2 FDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTS---AVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDM 574 F LGS + I G KTT+ VS+++RGAN+ +LDE ER+LHDA+C ++ ++ ++AGGGA E +S L A T+ E E+AE+L +IP LA NA ++ +V +LR H + S+ G+ + + N E +++P + I+ +E +ILRIDD+ Sbjct: 341 FTEDRLGSADVVEEVESDGSNIVTITGVKTTNKNPTVSVVIRGANNMVLDETERSLHDALCVIRCLVKERALIAGGGAPEIEVSYRLMKEARTMEGVEAFVWQEYAEALEVIPTTLAENAGLNSLNVVTELRLRHENGE--------SNSGISVRRSGTSNTYEDHILQPVLVSTSAIRLASECVKSILRIDDI 526
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: THSB_SULSO (Thermosome subunit beta OS=Sulfolobus solfataricus GN=thsB PE=3 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 2.140e-22 Identity = 60/170 (35.29%), Postives = 96/170 (56.47%), Query Frame = 2 Query: 68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI 577 + ++G K +VS+++RG + ++DE ERAL DA+ TV + VAGGGAVE ++ L A +G +EQLA+ +A ++ + +LA NA D + + +LR+ H K GL+L G + + GVIEPA+ K+ ++ TEA +LRIDD++ Sbjct: 367 VFVEGAKNPKSVSILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVEIEIAKRLRKYAPQVGGKEQLAIEAYANAIEGLIMILAENAGLDPIDKLMQLRSLHENETNK-------WYGLNLFTGNPEDMWKLGVIEPALVKMNAVKAATEAVTLVLRIDDIV 529
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPB_SCHPO (Probable T-complex protein 1 subunit beta OS=Schizosaccharomyces pombe GN=cct2 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.795e-22 Identity = 57/171 (33.33%), Postives = 98/171 (57.31%), Query Frame = 2 Query: 68 IMIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIK 580 I G + A +++LRGA +LDE ERA+HDA+ + +T+ + V GGG E ++ +E AT ++ +A++ FA++L +P +LA NA D++ELVA+L+A H+ +MGLD+ +G I + G++E K ++ +E A +LR+D ++K Sbjct: 356 IKFSGVEAGEACTIVLRGATHQLLDESERAIHDALAVLSQTVAESRVTLGGGCAEMLMAKAVEEAATHEPGKKAVAVSAFAKALSQLPTILADNAGFDSSELVAQLKAAHYDGN--------DTMGLDMDEGEIADMRAKGILEALKLKQAVVSSGSEGAQLLLRVDTILK 518
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPH_YEAST (T-complex protein 1 subunit eta OS=Saccharomyces cerevisiae GN=CCT7 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.227e-22 Identity = 63/178 (35.39%), Postives = 98/178 (55.06%), Query Frame = 2 Query: 71 MIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIKLMKDESQN 604 + +G +L+LRG + ++ E+ER+LHDAI VKR L++ +VAGGGA E +S L + T+ ++Q+ + FA++L +IP+ L NA DA E++ KLR H +K +K + G+ I +N V EPA+ K+ + TEA IL +D+ I ES N Sbjct: 364 LFQGCPQAKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAH----SKGEKWY----GVVFETENIGDNFAKFVWEPALVKINALNSATEATNLILSVDETITNKGSESAN 533
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPH_DICDI (T-complex protein 1 subunit eta OS=Dictyostelium discoideum GN=cct7 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.227e-22 Identity = 56/170 (32.94%), Postives = 97/170 (57.06%), Query Frame = 2 Query: 71 MIKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMIK 580 + G T ++ILRG + +DE ER+LHD+I V+R + +VVAGGGA+E +S YL + ++ ++QL + FA++L +IP+ +A NA D+T+++ +LR H + G+D+ I + E+ + EP++ K+ I TEA IL +D+ ++ Sbjct: 360 LFTGCTMTQTATIILRGGGEQFIDEAERSLHDSIMIVRRARKHRSVVAGGGAIEMEVSKYLRDYSLSIEGKKQLLINAFAKALEVIPRQIADNAGFDSTDILNQLRQKHAQGE--------KWFGVDIVNEGICDTYESAIWEPSLVKLNSIVAATEATCLILSVDETVQ 521 The following BLAST results are available for this feature:
BLAST of CX294745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294745 ID=CX294745; Name=CX294745; organism=Citrus clementina; type=EST; length=609bpback to top |