CX294745
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPD_ASHGO (T-complex protein 1 subunit delta OS=Ashbya gossypii GN=CCT4 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.812e-21 Identity = 62/194 (31.96%), Postives = 99/194 (51.03%), Query Frame = 2 Query: 2 FDSSLLGSXXXXXXXXXXXXXXIMIKGTKTTSA---VSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDM 574 F LGS + I G KT +A VS I+RGAN+ +LDE ER+LHDA+C ++ ++ ++AGGGA E +S + + + E EFAE+L +IP LA NA ++ ++V +LR+ H + +T A G+ + + N + +++P + I E +ILRIDD+ Sbjct: 340 FTEDRLGSADLVEEIDSDGTKIVKITGIKTGNAKPTVSCIVRGANNVVLDETERSLHDALCVIRCLVKERALIAGGGAPEIEVSRTIMRESRAMQGVEAFVWQEFAEALEVIPTTLAENAGLNSIKVVTELRSRHESGETNA--------GISVRRSGTTNTYDEHILQPVLVSTSAITLAAECVKSILRIDDI 525
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPD_TAKRU (T-complex protein 1 subunit delta OS=Takifugu rubripes GN=cct4 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.271e-21 Identity = 53/159 (33.33%), Postives = 93/159 (58.49%), Query Frame = 2 Query: 101 VSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI 577 VS+++RG+N +++E ER++HDA+C ++ ++ ++AGGGA E L+V L + TLG E + ++++L +IP LA NA + V +LR H + DK G+++ KG I N +E V++P + + + TE +IL+IDD++ Sbjct: 383 VSIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELAVRLAEYSRTLGGMEAYCVRAYSDALEVIPSTLAENAGLNPISTVTELRNRH----AQGDK----MAGINVRKGGISNIMEELVVQPLLVSISALTLATETVRSILKIDDVV 533
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPD_SCHPO (T-complex protein 1 subunit delta OS=Schizosaccharomyces pombe GN=cct4 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 5.271e-21 Identity = 58/170 (34.12%), Postives = 93/170 (54.71%), Query Frame = 2 Query: 68 IMIKGTKTTS-AVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDM 574 + G K VS++ RGAN L+E ER+LHDA+C ++ ++ ++AGGG+ E + L A L RE + + F+E+L IIP LA NA +A ++V +LR+ H + A G+++ KG + N LE V++P + + IQ E I++IDD+ Sbjct: 362 VKFSGVKNAGKTVSILCRGANLLTLEEAERSLHDALCVIRCLVKQRALIAGGGSPEIEAAQRLLEHARQLEGREAICIRAFSEALEIIPVTLAENAGLNAIQVVTELRSRHANGEKTA--------GINVRKGIVTNILEENVLQPLLVNISAIQLAAETTKMIMKIDDI 523
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPD_RAT (T-complex protein 1 subunit delta OS=Rattus norvegicus GN=Cct4 PE=1 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 6.885e-21 Identity = 52/165 (31.52%), Postives = 92/165 (55.76%), Query Frame = 2 Query: 83 TKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI 577 T V++++RG+N +++E ER++HDA+C ++ ++ ++AGGGA E L++ L + TL E + FA+++ +IP LA NA + V +LR H + + G+++ KG I N LE V++P + V + TE +IL+IDD++ Sbjct: 380 TSPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGE--------KTTGINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVV 536
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPD_MOUSE (T-complex protein 1 subunit delta OS=Mus musculus GN=Cct4 PE=1 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 6.885e-21 Identity = 52/165 (31.52%), Postives = 92/165 (55.76%), Query Frame = 2 Query: 83 TKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI 577 T V++++RG+N +++E ER++HDA+C ++ ++ ++AGGGA E L++ L + TL E + FA+++ +IP LA NA + V +LR H + + G+++ KG I N LE V++P + V + TE +IL+IDD++ Sbjct: 380 TSPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGE--------KTTGINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVV 536
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPD_BOVIN (T-complex protein 1 subunit delta OS=Bos taurus GN=CCT4 PE=2 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 6.885e-21 Identity = 51/159 (32.08%), Postives = 91/159 (57.23%), Query Frame = 2 Query: 101 VSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI 577 V++++RG+N +++E ER++HDA+C ++ ++ ++AGGGA E L++ L + TL E + FA+++ +IP LA NA + V +LR H + + G+++ KG I N LE V++P + V + TE +IL+IDD++ Sbjct: 389 VTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGE--------KTTGINVRKGGISNILEEQVVQPLLVSVSALTLATETVRSILKIDDVV 539
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPD_PONAB (T-complex protein 1 subunit delta OS=Pongo abelii GN=CCT4 PE=2 SV=3) HSP 1 Score: 100.138 bits (248), Expect = 8.992e-21 Identity = 52/159 (32.70%), Postives = 91/159 (57.23%), Query Frame = 2 Query: 101 VSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI 577 V++++RG+N +++E ER++HDA+C ++ ++ ++AGGGA E L++ L + TL E + FA+++ +IP LA NA + V +LR H + A G+++ KG I N LE V++P + V + TE +IL+IDD++ Sbjct: 386 VTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTA--------GINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVV 536
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPD_HUMAN (T-complex protein 1 subunit delta OS=Homo sapiens GN=CCT4 PE=1 SV=4) HSP 1 Score: 100.138 bits (248), Expect = 8.992e-21 Identity = 52/159 (32.70%), Postives = 91/159 (57.23%), Query Frame = 2 Query: 101 VSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI 577 V++++RG+N +++E ER++HDA+C ++ ++ ++AGGGA E L++ L + TL E + FA+++ +IP LA NA + V +LR H + A G+++ KG I N LE V++P + V + TE +IL+IDD++ Sbjct: 386 VTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTA--------GINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVV 536
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPD_CANGA (T-complex protein 1 subunit delta OS=Candida glabrata GN=CCT4 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 8.992e-21 Identity = 54/167 (32.34%), Postives = 91/167 (54.49%), Query Frame = 2 Query: 74 IKGTKTTSAVSLILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAKGTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDM 574 +KG VS+I+RGAN +LDE ER+LHDA+C ++ ++ ++AGGGA E +S LE + ++ E EFA++L +IP LA NA ++ +++ +LR+ H + G+ + + N E +++P + I +E +ILRIDD+ Sbjct: 367 VKGVNAKPTVSVIIRGANSMILDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLERESRSMEGVEAYIWQEFAQALEVIPTTLAENAGLNSIKVITELRSRHENGDV--------NEGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDI 525
BLAST of CX294745 vs. ExPASy Swiss-Prot
Match: TCPQ_BOVIN (T-complex protein 1 subunit theta OS=Bos taurus GN=CCT8 PE=2 SV=3) HSP 1 Score: 97.8265 bits (242), Expect = 4.463e-20 Identity = 58/173 (33.53%), Postives = 95/173 (54.91%), Query Frame = 2 Query: 68 IMIKGTKTTSAVS-LILRGANDYMLDEMERALHDAICTVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLALAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHAAQTKADKKHLSSMGLDLAK--GTIRNNLEAGVIEPAMSKVKIIQFXTEAAITILRIDDMI 577 ++ K K A+S ++LRG+ D ++D++ERA+ D + T K +V GGGA E L+ + T EQ A+ +FAE+ IP+ LA N+ A E+++KL A H ++GLD+ +++ LEAGV++ + K I+ T AA+T+LR+D +I Sbjct: 361 VVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGN--------KNVGLDIEAEVPAVKDMLEAGVLDTYLGKYWAIKLATNAAVTVLRVDQII 525 The following BLAST results are available for this feature:
BLAST of CX294745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294745 ID=CX294745; Name=CX294745; organism=Citrus clementina; type=EST; length=609bpback to top |