CX294746

Overview
NameCX294746
Unique NameCX294746
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNJA4_MOUSE (DnaJ homolog subfamily A member 4 OS=Mus musculus GN=Dnaja4 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.629e-17
Identity = 53/171 (30.99%), Postives = 91/171 (53.22%), Query Frame = 2
Query:   53 EVYHKQIGPGMFQQMT---------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKG--ITKPKEVRKFGGEGMPLHFSN-KKGDLYITFEVLFP 511
            +V+ +QIGPGM QQ+                +  C+ C   K  RE   + V +EKGM+DGQ+++F+ +G+ + + +PGD+   +    H  F+R G +              GF+KTI+ LD+ ++ IS+K   + K  +++    EGMP++ +  +KG + I F V+FP
Sbjct:  160 QVHIQQIGPGMVQQIQTVCIECKGQGERINPKDRCENCSGAKVTREKKIIEVHVEKGMKDGQKILFHGEGDQEPELDPGDVIIVLDQKDHSVFQRRGQDLIMKMKIQLSEALCGFKKTIKTLDDRVLVISSKSGEVIKHGDLKCIRNEGMPIYKAPLEKGVMIIQFLVVFP 330          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.629e-17
Identity = 57/182 (31.32%), Postives = 84/182 (46.15%), Query Frame = 2
Query:   65 KQIGPGMFQQMTEQV---------------CDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTK--GITKPKEVRKFGGEGMPLHFSN-KKGDLYITFEVLFPTTLTEDQKTRIKEVL 556
            +Q GPGM QQ+                   C QC+  K   E   + V++EKGMQ  Q++ F    +   D   GD+ F I+   H +F+R+G +              GF+  + HLD+  + I +K   + KP   +    EGMP++     KG LYI F V FP +L+ DQ   I+ VL
Sbjct:  178 RQFGPGMMQQVQHACNDCKGTGETINDRDRCPQCKGEKVVSEKKVLEVNVEKGMQHNQKITFSGQADEAPDTVTGDIVFVIQQKEHPKFKRKGEDLFVEHTISLTEALCGFQFVLTHLDKRQLLIKSKPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPESLSPDQTKAIEAVL 359          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.740e-17
Identity = 60/202 (29.70%), Postives = 94/202 (46.53%), Query Frame = 2
Query:   14 KPAPGKRRCNCRN---EVYHKQIGPGMFQQMTEQV---------------CDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLD--EHLVDISTKGITKPKEVRKFGGEGMPLHFSN-KKGDLYITFEVLFPTTLTEDQKTRIKEVL 556
            K     R  +C+    +V  +Q+GPGM QQM                   C  C+  K  +E   + V +EKGMQ+GQ + F  + +   D   GD+ F ++   H +F+R+G++              GF+  + HLD  + L+  +   + KP + +    EGMP++     +G LYI F V FP +LT DQ   I+ VL
Sbjct:  136 KSGASMRCASCQGSGMKVSIRQLGPGMIQQMQHPCNDCKGTGEMINDKDRCPLCKGEKVVQEKKVLEVHVEKGMQNGQRITFPGEADEAPDTVTGDIVFVLQQKEHPKFQRKGDDLFYKHTLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIQFLVDFPDSLTPDQCKVIESVL 337          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.352e-16
Identity = 55/182 (30.22%), Postives = 83/182 (45.60%), Query Frame = 2
Query:   65 KQIGPGMFQQMTEQV---------------CDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEH--LVDISTKGITKPKEVRKFGGEGMPLHFSN-KKGDLYITFEVLFPTTLTEDQKTRIKEVL 556
            +Q+GPGM QQM                   C QC+  K   E   + V++EKGMQ  Q++ F    +   D   GD+ F ++   H +F+R+G +              GF+  + HLD    L+  +   + KP   +    EGMP++     KG LYI F V FP +L+ DQ   ++ VL
Sbjct:  177 RQLGPGMIQQMQHACNECKGTGETINDRDRCPQCKGDKVIPEKKVLEVNVEKGMQHSQKITFEGQADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFVEHTLSLTEALCGFQFVLTHLDGRSLLIKSNPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPDSLSPDQTKALEAVL 358          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNJA2_RAT (DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.844e-16
Identity = 54/184 (29.35%), Postives = 91/184 (49.46%), Query Frame = 2
Query:   65 KQIGPGMFQQMT---------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLD--EHLVDISTKGITKPKEVRKFGGEGMPLHFSN-KKGDLYITFEVLFPTT--LTEDQKTRIKEVL 556
            +Q+ PGM QQM                +  C +C+  K  +E   + V ++KGM+ GQ + F  + +     EPGD+   ++   H+ F+R+GN+              GF+ T +HLD  + +V      + +P  VR   GEGMP + +  +KGDLYI F+V FP    +  D+ + ++++L
Sbjct:  172 RQLAPGMVQQMQSVCSDCNGEGEVINEKDRCKKCEGKKVIKEVKILEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLFVQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLL 355          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNJA2_MOUSE (DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.844e-16
Identity = 54/184 (29.35%), Postives = 91/184 (49.46%), Query Frame = 2
Query:   65 KQIGPGMFQQMT---------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLD--EHLVDISTKGITKPKEVRKFGGEGMPLHFSN-KKGDLYITFEVLFPTT--LTEDQKTRIKEVL 556
            +Q+ PGM QQM                +  C +C+  K  +E   + V ++KGM+ GQ + F  + +     EPGD+   ++   H+ F+R+GN+              GF+ T +HLD  + +V      + +P  VR   GEGMP + +  +KGDLYI F+V FP    +  D+ + ++++L
Sbjct:  172 RQLAPGMVQQMQSVCSDCNGEGEVINEKDRCKKCEGKKVIKEVKILEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLL 355          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNJA2_HUMAN (DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.844e-16
Identity = 54/184 (29.35%), Postives = 91/184 (49.46%), Query Frame = 2
Query:   65 KQIGPGMFQQMT---------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLD--EHLVDISTKGITKPKEVRKFGGEGMPLHFSN-KKGDLYITFEVLFPTT--LTEDQKTRIKEVL 556
            +Q+ PGM QQM                +  C +C+  K  +E   + V ++KGM+ GQ + F  + +     EPGD+   ++   H+ F+R+GN+              GF+ T +HLD  + +V      + +P  VR   GEGMP + +  +KGDLYI F+V FP    +  D+ + ++++L
Sbjct:  172 RQLAPGMVQQMQSVCSDCNGEGEVINEKDRCKKCEGKKVIKEVKILEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLL 355          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNJA2_BOVIN (DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.844e-16
Identity = 54/184 (29.35%), Postives = 91/184 (49.46%), Query Frame = 2
Query:   65 KQIGPGMFQQMT---------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLD--EHLVDISTKGITKPKEVRKFGGEGMPLHFSN-KKGDLYITFEVLFPTT--LTEDQKTRIKEVL 556
            +Q+ PGM QQM                +  C +C+  K  +E   + V ++KGM+ GQ + F  + +     EPGD+   ++   H+ F+R+GN+              GF+ T +HLD  + +V      + +P  VR   GEGMP + +  +KGDLYI F+V FP    +  D+ + ++++L
Sbjct:  172 RQLAPGMVQQMQSVCSDCNGEGEVINEKDRCKKCEGKKVIKEVKILEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLL 355          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNJA1_DICDI (DnaJ homolog subfamily A member 1 homolog OS=Dictyostelium discoideum GN=dnaja1 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.525e-15
Identity = 54/191 (28.27%), Postives = 89/191 (46.60%), Query Frame = 2
Query:   38 CNCRNEVYHK-QIGPGMFQQMT---------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDIS-TKG-ITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL 556
            CN    V+ K Q+GPGM QQ+                E  C +C+  +  +    V   +EKG +DG+ ++    G       PGD+   IR  P+  F+R G+N              G +  I  LD+  + ++  KG I K  ++R    EGMP+  +++KG L I F++ +P+ LT D   ++ ++L
Sbjct:  191 CNGSRYVFQKKQVGPGMIQQVQTACHTCHGTGEKIKEEDKCKECKGKRVIQGKKIVQFQVEKGTRDGERIMLQGQGSEYPGVPPGDVIITIREKPNVNFKRNGDNLIYTKRLKLLDSIAGSQFIINTLDQRKLWVNHEKGDIIKQGDMRYIENEGMPIKGTSRKGKLIIAFDIEYPSNLTNDDIEKLSKIL 381          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.601e-15
Identity = 52/182 (28.57%), Postives = 83/182 (45.60%), Query Frame = 2
Query:   65 KQIGPGMFQQMTEQV---------------CDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLD--EHLVDISTKGITKPKEVRKFGGEGMPLHFSN-KKGDLYITFEVLFPTTLTEDQKTRIKEVL 556
            + +GP M QQM                   C QC+  K  +E   + V +EKGMQ GQ++ F  + +   D   GD+ F ++   H +F+R+G +              GF   + HLD  + L+  +   + KP + +    EGMP++     KG +YI F V FP +L  DQ   ++ +L
Sbjct:  177 RHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVVQEKKVLEVVVEKGMQHGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFRFVLTHLDGRQLLIKSNLGEVVKPDQFKAIEDEGMPIYQRPFMKGKMYIHFTVEFPDSLNPDQVKSLEAIL 358          
The following BLAST results are available for this feature:
BLAST of CX294746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
DNJA4_MOUSE1.629e-1730.99DnaJ homolog subfamily A member 4 OS=Mus musculus ... [more]
DNAJ2_ARATH3.629e-1731.32Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
DNJH1_ALLPO4.740e-1729.70DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNAJ3_ARATH2.352e-1630.22Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNJA2_RAT6.844e-1629.35DnaJ homolog subfamily A member 2 OS=Rattus norveg... [more]
DNJA2_MOUSE6.844e-1629.35DnaJ homolog subfamily A member 2 OS=Mus musculus ... [more]
DNJA2_HUMAN6.844e-1629.35DnaJ homolog subfamily A member 2 OS=Homo sapiens ... [more]
DNJA2_BOVIN6.844e-1629.35DnaJ homolog subfamily A member 2 OS=Bos taurus GN... [more]
DNJA1_DICDI1.525e-1528.27DnaJ homolog subfamily A member 1 homolog OS=Dicty... [more]
DNJH_ATRNU2.601e-1528.57DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]

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Properties
Property NameValue
Genbank descriptionC05055D12SK FlavSen1 Citrus clementina cDNA clone C05055D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294746 ID=CX294746; Name=CX294746; organism=Citrus clementina; type=EST; length=711bp
GAAAAATGTTATAAAGCCAGCCCCAGGCAAAAGGCGCTGTAACTGCAGAA
ATGAGGTATATCACAAACAAATTGGTCCTGGCATGTTCCAACAGATGACT
GAGCAGGTCTGCGATCAATGCCAAAATGTTAAATATGAGAGAGAGGGATA
TTTTGTAACAGTTGATATTGAAAAAGGGATGCAAGATGGACAAGAGGTGG
TTTTCTATGAAGATGGTGAGCCCAAAATTGATGGAGAACCTGGAGATTTG
AAGTTCCGTATTCGCACAGCACCCCATGATCGCTTCAGAAGGGAAGGAAA
TAACTTGCACACAACTGTCACTGTCACGCTGGTTCAAGCTCTTGTTGGTT
TTGAGAAGACCATTGAGCACCTTGACGAACATTTAGTTGACATCAGCACA
AAGGGAATCACTAAGCCCAAGGAAGTGAGGAAGTTCGGAGGGGAAGGAAT
GCCATTGCATTTTAGCAACAAGAAAGGAGACCTCTATATCACATTTGAGG
TACTATTCCCAACAACTCTAACAGAGGATCAGAAGACAAGGATCAAGGAA
GTTCTTGGCTAGGATATATTAAGTAAATGTTTTTATTTGGGTTCTTAGGC
GTTCCCACTGTAACATGATGAGGTCACATTGCAAATTTAGGAACTATTTT
GGGTCTCTTGATAACAAGTAGTGCAAGTCTAAGATGCCTTACTGCATACT
GTCATTGTTTG
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