CX294746

Overview
NameCX294746
Unique NameCX294746
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNJB1_HUMAN (DnaJ homolog subfamily B member 1 OS=Homo sapiens GN=DNAJB1 PE=1 SV=4)

HSP 1 Score: 81.6481 bits (200), Expect = 4.436e-15
Identity = 44/174 (25.29%), Postives = 84/174 (48.28%), Query Frame = 2
Query:   38 CNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPL-HFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL 556
            C  + ++ HK++ P                     E   +T++++KG ++G ++ F ++G+   +  P D+ F ++  PH+ F+R+G++              G    +  LD   + +  K + +P   RK  GEG+PL     K+GDL I FEV+FP  + +  +T +++VL
Sbjct:  179 CTKKMKISHKRLNP--------------DGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL 338          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.567e-15
Identity = 52/182 (28.57%), Postives = 84/182 (46.15%), Query Frame = 2
Query:   65 KQIGPGMFQQMTEQV---------------CDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLD--EHLVDISTKGITKPKEVRKFGGEGMPLHFSN-KKGDLYITFEVLFPTTLTEDQKTRIKEVL 556
            + +GP M QQM                   C QC+  K  +E   + V +EKGMQ+ Q++ F  + +   D   GD+ F ++   H +F+R+G++              GF+  + HLD  + L+      + KP + +    EGMP++     KG LYI F V FP +L  +Q   ++ VL
Sbjct:  175 RHLGPSMIQQMQHPCNECKGTGETINDKDRCSQCKGEKVVQEKKVLEVIVEKGMQNAQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLVESLCGFQFILTHLDGRQLLIKSLPGEVVKPDQFKAINDEGMPMYQRPFMKGKLYIHFSVEFPDSLNPEQCKALEGVL 356          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DJB13_HUMAN (DnaJ homolog subfamily B member 13 OS=Homo sapiens GN=DNAJB13 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.567e-15
Identity = 44/135 (32.59%), Postives = 70/135 (51.85%), Query Frame = 2
Query:  155 VTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPL-HFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL 556
            +T+D++ G + G  + F ++G+   +  P D+ F ++   H RFRRE +N                   +  LD+ L++I    I  PK  +K  GEGMPL     KKGDL+I F++ FPT LT  +K  +++ L
Sbjct:  180 LTIDVKPGWRQGTRITFEKEGDQGPNIIPADIIFIVKEKLHPRFRRENDNLFFVNPIPLGKALTCCTVEVRTLDDRLLNIPINDIIHPKYFKKVPGEGMPLPEDPTKKGDLFIFFDIQFPTRLTPQKKQMLRQAL 314          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNJB1_BOVIN (DnaJ homolog subfamily B member 1 OS=Bos taurus GN=DNAJB1 PE=2 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 9.883e-15
Identity = 43/174 (24.71%), Postives = 84/174 (48.28%), Query Frame = 2
Query:   38 CNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPL-HFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL 556
            C  + ++ HK++ P                     E   +T+++++G ++G ++ F ++G+   +  P D+ F ++  PH+ F+R+G++              G    +  LD   + +  K + +P   RK  GEG+PL     K+GDL I FEV+FP  + +  +T +++VL
Sbjct:  179 CTKKMKISHKRLNP--------------DGKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL 338          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: MAS5_SCHPO (Mitochondrial protein import protein mas5 OS=Schizosaccharomyces pombe GN=SPBC1734.11 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.291e-14
Identity = 46/139 (33.09%), Postives = 69/139 (49.64%), Query Frame = 2
Query:  101 EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEH--LVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFP 511
            E  C +C   K   +   +TV +EKGM +GQ++VF E+GE      PGD+ F I    H RF+R G++              G +  +EHLD+    + I      +P E++   G+GM     ++ G+LYI F V FP
Sbjct:  192 EDRCKECDGAKVISQRKILTVHVEKGMHNGQKIVFKEEGEQAPGIIPGDVIFVIDQKEHPRFKRSGDHLFYEAHVDLLTALAGGQIVVEHLDDRWLTIPIIPGECIRPNELKVLPGQGMLSQRHHQPGNLYIRFHVDFP 330          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNJB1_MOUSE (DnaJ homolog subfamily B member 1 OS=Mus musculus GN=Dnajb1 PE=2 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14
Identity = 43/174 (24.71%), Postives = 83/174 (47.70%), Query Frame = 2
Query:   38 CNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPL-HFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL 556
            C  + ++ HK++ P                     E   +T+++++G ++G ++ F ++G+   +  P D+ F ++  PH+ F+R+G++              G    +  LD   + +  K + +P   RK  GEG+PL     K+GDL I FEV+FP  +    +T +++VL
Sbjct:  179 CTKKMKISHKRLNP--------------DGKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLVIEFEVIFPERIPVSSRTILEQVL 338          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNJA1_RAT (DnaJ homolog subfamily A member 1 OS=Rattus norvegicus GN=Dnaja1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.755e-14
Identity = 60/196 (30.61%), Postives = 95/196 (48.47%), Query Frame = 2
Query:   41 NCRN---EVYHKQIGPGMFQQMTEQVCDQCQNV----------------KYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTK--GITKPKEVRKFGGEGMPLH-FSNKKGDLYITFEVLFPTT--LTEDQKTRIKEVL 556
            NCR    ++   QIGPGM QQ+ + VC +CQ                  K  RE   + V I+KGM+DGQ++ F+ +G+ +   EPGD+   +    H  F R G +              GF+K I  LD   + I++    I K  +++    EGMP++    +KG L I F+V FP    L+ D+ + ++++L
Sbjct:  152 NCRGTGMQIRIHQIGPGMVQQI-QSVCMECQGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLL 346          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNJA1_PONAB (DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.755e-14
Identity = 60/196 (30.61%), Postives = 95/196 (48.47%), Query Frame = 2
Query:   41 NCRN---EVYHKQIGPGMFQQMTEQVCDQCQNV----------------KYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTK--GITKPKEVRKFGGEGMPLH-FSNKKGDLYITFEVLFPTT--LTEDQKTRIKEVL 556
            NCR    ++   QIGPGM QQ+ + VC +CQ                  K  RE   + V I+KGM+DGQ++ F+ +G+ +   EPGD+   +    H  F R G +              GF+K I  LD   + I++    I K  +++    EGMP++    +KG L I F+V FP    L+ D+ + ++++L
Sbjct:  151 NCRGTGMQIRIHQIGPGMVQQI-QSVCMECQGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLL 345          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNJA1_MOUSE (DnaJ homolog subfamily A member 1 OS=Mus musculus GN=Dnaja1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.755e-14
Identity = 60/196 (30.61%), Postives = 95/196 (48.47%), Query Frame = 2
Query:   41 NCRN---EVYHKQIGPGMFQQMTEQVCDQCQNV----------------KYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTK--GITKPKEVRKFGGEGMPLH-FSNKKGDLYITFEVLFPTT--LTEDQKTRIKEVL 556
            NCR    ++   QIGPGM QQ+ + VC +CQ                  K  RE   + V I+KGM+DGQ++ F+ +G+ +   EPGD+   +    H  F R G +              GF+K I  LD   + I++    I K  +++    EGMP++    +KG L I F+V FP    L+ D+ + ++++L
Sbjct:  152 NCRGTGMQIRIHQIGPGMVQQI-QSVCMECQGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLL 346          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNJA1_HUMAN (DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.755e-14
Identity = 60/196 (30.61%), Postives = 95/196 (48.47%), Query Frame = 2
Query:   41 NCRN---EVYHKQIGPGMFQQMTEQVCDQCQNV----------------KYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTK--GITKPKEVRKFGGEGMPLH-FSNKKGDLYITFEVLFPTT--LTEDQKTRIKEVL 556
            NCR    ++   QIGPGM QQ+ + VC +CQ                  K  RE   + V I+KGM+DGQ++ F+ +G+ +   EPGD+   +    H  F R G +              GF+K I  LD   + I++    I K  +++    EGMP++    +KG L I F+V FP    L+ D+ + ++++L
Sbjct:  152 NCRGTGMQIRIHQIGPGMVQQI-QSVCMECQGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLL 346          
The following BLAST results are available for this feature:
BLAST of CX294746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
DNJB1_HUMAN4.436e-1525.29DnaJ homolog subfamily B member 1 OS=Homo sapiens ... [more]
DNJH_CUCSA7.567e-1528.57DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DJB13_HUMAN7.567e-1532.59DnaJ homolog subfamily B member 13 OS=Homo sapiens... [more]
DNJB1_BOVIN9.883e-1524.71DnaJ homolog subfamily B member 1 OS=Bos taurus GN... [more]
MAS5_SCHPO1.291e-1433.09Mitochondrial protein import protein mas5 OS=Schiz... [more]
DNJB1_MOUSE2.202e-1424.71DnaJ homolog subfamily B member 1 OS=Mus musculus ... [more]
DNJA1_RAT3.755e-1430.61DnaJ homolog subfamily A member 1 OS=Rattus norveg... [more]
DNJA1_PONAB3.755e-1430.61DnaJ homolog subfamily A member 1 OS=Pongo abelii ... [more]
DNJA1_MOUSE3.755e-1430.61DnaJ homolog subfamily A member 1 OS=Mus musculus ... [more]
DNJA1_HUMAN3.755e-1430.61DnaJ homolog subfamily A member 1 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionC05055D12SK FlavSen1 Citrus clementina cDNA clone C05055D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294746 ID=CX294746; Name=CX294746; organism=Citrus clementina; type=EST; length=711bp
GAAAAATGTTATAAAGCCAGCCCCAGGCAAAAGGCGCTGTAACTGCAGAA
ATGAGGTATATCACAAACAAATTGGTCCTGGCATGTTCCAACAGATGACT
GAGCAGGTCTGCGATCAATGCCAAAATGTTAAATATGAGAGAGAGGGATA
TTTTGTAACAGTTGATATTGAAAAAGGGATGCAAGATGGACAAGAGGTGG
TTTTCTATGAAGATGGTGAGCCCAAAATTGATGGAGAACCTGGAGATTTG
AAGTTCCGTATTCGCACAGCACCCCATGATCGCTTCAGAAGGGAAGGAAA
TAACTTGCACACAACTGTCACTGTCACGCTGGTTCAAGCTCTTGTTGGTT
TTGAGAAGACCATTGAGCACCTTGACGAACATTTAGTTGACATCAGCACA
AAGGGAATCACTAAGCCCAAGGAAGTGAGGAAGTTCGGAGGGGAAGGAAT
GCCATTGCATTTTAGCAACAAGAAAGGAGACCTCTATATCACATTTGAGG
TACTATTCCCAACAACTCTAACAGAGGATCAGAAGACAAGGATCAAGGAA
GTTCTTGGCTAGGATATATTAAGTAAATGTTTTTATTTGGGTTCTTAGGC
GTTCCCACTGTAACATGATGAGGTCACATTGCAAATTTAGGAACTATTTT
GGGTCTCTTGATAACAAGTAGTGCAAGTCTAAGATGCCTTACTGCATACT
GTCATTGTTTG
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