CX294746

Overview
NameCX294746
Unique NameCX294746
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNJA1_BOVIN (DnaJ homolog subfamily A member 1 OS=Bos taurus GN=DNAJA1 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.755e-14
Identity = 60/196 (30.61%), Postives = 95/196 (48.47%), Query Frame = 2
Query:   41 NCRN---EVYHKQIGPGMFQQMTEQVCDQCQNV----------------KYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTK--GITKPKEVRKFGGEGMPLH-FSNKKGDLYITFEVLFPTT--LTEDQKTRIKEVL 556
            NCR    ++   QIGPGM QQ+ + VC +CQ                  K  RE   + V I+KGM+DGQ++ F+ +G+ +   EPGD+   +    H  F R G +              GF+K I  LD   + I++    I K  +++    EGMP++    +KG L I F+V FP    L+ D+ + ++++L
Sbjct:  152 NCRGTGMQIRIHQIGPGMVQQI-QSVCMECQGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLL 346          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNAJ1_CERAE (DnaJ homolog subfamily A member 1 OS=Cercopithecus aethiops GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.905e-14
Identity = 59/196 (30.10%), Postives = 95/196 (48.47%), Query Frame = 2
Query:   41 NCRN---EVYHKQIGPGMFQQMTEQVCDQCQNV----------------KYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTK--GITKPKEVRKFGGEGMPLH-FSNKKGDLYITFEVLFPTT--LTEDQKTRIKEVL 556
            NCR    ++   QIGPGM QQ+ + VC +CQ                  K  RE   + V I+KGM+DGQ++ F+ +G+ +   EPGD+   +    H  F R G +              GF+K I  LD   + I++    I K  +++    EGMP++    +KG L I F++ FP    L+ D+ + ++++L
Sbjct:  152 NCRGTGMQIRIHQIGPGMVQQI-QSVCMECQGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKINFPENGFLSPDKLSLLEKLL 346          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DJB13_MOUSE (DnaJ homolog subfamily B member 13 OS=Mus musculus GN=Dnajb13 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.406e-14
Identity = 43/135 (31.85%), Postives = 70/135 (51.85%), Query Frame = 2
Query:  155 VTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPL-HFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL 556
            +T+D+  G + G  + F ++G+   +  P D+ F ++   H RFRRE +N                   ++ LD+ L++I    I  PK  +   GEGMPL    +KKGDL+I F++ FPT LT  +K  +++ L
Sbjct:  180 LTIDVRPGWRQGTRITFEKEGDQGPNIIPADIIFIVKEKLHPRFRREHDNLFFVYPIPLGKALTCCTVEVKTLDDRLLNIPINDIVHPKYFKIVPGEGMPLPENPSKKGDLFIFFDIQFPTRLTPQKKQMLRQAL 314          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNJB4_PONAB (DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.152e-13
Identity = 41/142 (28.87%), Postives = 72/142 (50.70%), Query Frame = 2
Query:  134 YEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFS-NKKGDLYITFEVLFPTTLTEDQKTRIKEVL 556
            Y  E   +T++I+KG ++G ++ F  +G+   +  P D+ F I+   H +F+R+G+N              G    +  LD   + +S   I KP   R+  G G+P   + +++GDL I FEV FP T++   K  +++ L
Sbjct:  193 YRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRNIPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHL 334          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNJB4_HUMAN (DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.152e-13
Identity = 41/142 (28.87%), Postives = 72/142 (50.70%), Query Frame = 2
Query:  134 YEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFS-NKKGDLYITFEVLFPTTLTEDQKTRIKEVL 556
            Y  E   +T++I+KG ++G ++ F  +G+   +  P D+ F I+   H +F+R+G+N              G    +  LD   + +S   I KP   R+  G G+P   + +++GDL I FEV FP T++   K  +++ L
Sbjct:  193 YRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRNIPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHL 334          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNJB5_MOUSE (DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.061e-12
Identity = 38/139 (27.34%), Postives = 68/139 (48.92%), Query Frame = 2
Query:  143 EGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPL-HFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL 556
            E   + + I++G ++G ++ F ++G+   D  P D+ F ++  PH  FRR+G N              G    I  +D  ++ +    + KP  V++  GEG+P      ++GDL + F+V FP  LT   +  +K+ L
Sbjct:  207 EDKILHIVIKRGWKEGTKITFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGRVIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHL 345          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNJB5_HUMAN (DnaJ homolog subfamily B member 5 OS=Homo sapiens GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.061e-12
Identity = 38/139 (27.34%), Postives = 68/139 (48.92%), Query Frame = 2
Query:  143 EGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPL-HFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL 556
            E   + + I++G ++G ++ F ++G+   D  P D+ F ++  PH  FRR+G N              G    I  +D  ++ +    + KP  V++  GEG+P      ++GDL + F+V FP  LT   +  +K+ L
Sbjct:  207 EDKILHIVIKRGWKEGTKITFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGRVIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHL 345          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNJB5_BOVIN (DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.061e-12
Identity = 38/139 (27.34%), Postives = 68/139 (48.92%), Query Frame = 2
Query:  143 EGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPL-HFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL 556
            E   + + I++G ++G ++ F ++G+   D  P D+ F ++  PH  FRR+G N              G    I  +D  ++ +    + KP  V++  GEG+P      ++GDL + F+V FP  LT   +  +K+ L
Sbjct:  207 EDKILHIVIKRGWKEGTKITFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGRVIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHL 345          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: DNJB4_BOVIN (DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.061e-12
Identity = 39/142 (27.46%), Postives = 71/142 (50.00%), Query Frame = 2
Query:  134 YEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFS-NKKGDLYITFEVLFPTTLTEDQKTRIKEVL 556
            Y  E   +T++I+KG ++G ++ F  +G+      P D+ F I+   H +F+R+G+N              G    +  +D   + ++   I KP   R+  G G+P   + +++GDL I FEV FP T++   K  +++ L
Sbjct:  193 YRTEDKILTIEIKKGWKEGTKITFPREGDETPTSIPADIVFVIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTMDGRTIPMTINDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHL 334          
BLAST of CX294746 vs. ExPASy Swiss-Prot
Match: MAS5_YEAST (Mitochondrial protein import protein MAS5 OS=Saccharomyces cerevisiae GN=YDJ1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.515e-12
Identity = 45/153 (29.41%), Postives = 71/153 (46.41%), Query Frame = 2
Query:  110 CDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHL--DEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTT--LTEDQKTRIKEVL 556
            C  C   K E E   + V +E GM+DGQ +VF  + +   D  PGD+ F +   PH  F+R+G++              G E  +EH+  D   V I    +  P   +   G+GMP+      G+L I F + FP     +E+   +++E+L
Sbjct:  201 CKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPENHFTSEENLKKLEEIL 353          
The following BLAST results are available for this feature:
BLAST of CX294746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
DNJA1_BOVIN3.755e-1430.61DnaJ homolog subfamily A member 1 OS=Bos taurus GN... [more]
DNAJ1_CERAE4.905e-1430.10DnaJ homolog subfamily A member 1 OS=Cercopithecus... [more]
DJB13_MOUSE6.406e-1431.85DnaJ homolog subfamily B member 13 OS=Mus musculus... [more]
DNJB4_PONAB4.152e-1328.87DnaJ homolog subfamily B member 4 OS=Pongo abelii ... [more]
DNJB4_HUMAN4.152e-1328.87DnaJ homolog subfamily B member 4 OS=Homo sapiens ... [more]
DNJB5_MOUSE2.061e-1227.34DnaJ homolog subfamily B member 5 OS=Mus musculus ... [more]
DNJB5_HUMAN2.061e-1227.34DnaJ homolog subfamily B member 5 OS=Homo sapiens ... [more]
DNJB5_BOVIN2.061e-1227.34DnaJ homolog subfamily B member 5 OS=Bos taurus GN... [more]
DNJB4_BOVIN2.061e-1227.46DnaJ homolog subfamily B member 4 OS=Bos taurus GN... [more]
MAS5_YEAST3.515e-1229.41Mitochondrial protein import protein MAS5 OS=Sacch... [more]

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Properties
Property NameValue
Genbank descriptionC05055D12SK FlavSen1 Citrus clementina cDNA clone C05055D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294746 ID=CX294746; Name=CX294746; organism=Citrus clementina; type=EST; length=711bp
GAAAAATGTTATAAAGCCAGCCCCAGGCAAAAGGCGCTGTAACTGCAGAA
ATGAGGTATATCACAAACAAATTGGTCCTGGCATGTTCCAACAGATGACT
GAGCAGGTCTGCGATCAATGCCAAAATGTTAAATATGAGAGAGAGGGATA
TTTTGTAACAGTTGATATTGAAAAAGGGATGCAAGATGGACAAGAGGTGG
TTTTCTATGAAGATGGTGAGCCCAAAATTGATGGAGAACCTGGAGATTTG
AAGTTCCGTATTCGCACAGCACCCCATGATCGCTTCAGAAGGGAAGGAAA
TAACTTGCACACAACTGTCACTGTCACGCTGGTTCAAGCTCTTGTTGGTT
TTGAGAAGACCATTGAGCACCTTGACGAACATTTAGTTGACATCAGCACA
AAGGGAATCACTAAGCCCAAGGAAGTGAGGAAGTTCGGAGGGGAAGGAAT
GCCATTGCATTTTAGCAACAAGAAAGGAGACCTCTATATCACATTTGAGG
TACTATTCCCAACAACTCTAACAGAGGATCAGAAGACAAGGATCAAGGAA
GTTCTTGGCTAGGATATATTAAGTAAATGTTTTTATTTGGGTTCTTAGGC
GTTCCCACTGTAACATGATGAGGTCACATTGCAAATTTAGGAACTATTTT
GGGTCTCTTGATAACAAGTAGTGCAAGTCTAAGATGCCTTACTGCATACT
GTCATTGTTTG
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