CX294747

Overview
NameCX294747
Unique NameCX294747
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length641
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294747 vs. ExPASy Swiss-Prot
Match: AB38G_ARATH (ABC transporter G family member 38 OS=Arabidopsis thaliana GN=ABCG38 PE=2 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 1.612e-79
Identity = 140/208 (67.31%), Postives = 171/208 (82.21%), Query Frame = 2
Query:   11 MVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQVIYAGPLGRQSQKLVEYFEAVPGVPRITNGYNPATWMLEISTPTAEAQLNVDFAEIYVRSSLYQRNEELIKELSTPAPGSSDLYFPTQYSQPFLIQCXACFWKQRQSYWRDPQYNALRFA 634
            +VG  G+ GLSTEQRKR+TIAVELVANPSI+FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFE+FDELFL+ RGG+ IY GP+G  S +L+EYFE + GV +I  GYNPATW LE++T   E  L V FA++Y +S+LY+RN++LIKEL+   P + D++F T+YSQ +L Q  AC WKQ +SYWR+  YNA+RF+
Sbjct:  964 LVGYVGISGLSTEQRKRMTIAVELVANPSILFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLLTRGGEEIYVGPIGHHSSQLIEYFEGIRGVGKIKEGYNPATWALEVTTRAQEDVLGVTFAQVYKKSNLYRRNKDLIKELNNIPPHAQDIHFSTKYSQSYLSQFQACLWKQHKSYWRNVPYNAVRFS 1171          
BLAST of CX294747 vs. ExPASy Swiss-Prot
Match: AB31G_ARATH (ABC transporter G family member 31 OS=Arabidopsis thaliana GN=ABCG31 PE=2 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 2.105e-79
Identity = 145/211 (68.72%), Postives = 167/211 (79.15%), Query Frame = 2
Query:    8 AMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQVIYAGPLGRQSQKLVEYFEAVPGVPRITNGYNPATWMLEISTPTAEAQLNVDFAEIYVRSSLYQRNEELIKELSTPAPGSSDLYFPTQYSQPFLIQCXACFWKQRQSYWRDPQYNALRFAVT 640
            A+VGLPG  GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDEL LMKRGGQVIY G LG  SQ LV+YF+ + GVP I++GYNPATWMLE++TP  E + N++FA++Y +S  ++  E  IK+LS P  GS  + F ++YSQ  L Q   C WKQ   YWR P+YN +R   T
Sbjct:  968 ALVGLPGTTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYGGKLGTHSQVLVDYFQGINGVPPISSGYNPATWMLEVTTPALEEKYNMEFADLYKKSDQFREVEANIKQLSVPPEGSEPISFTSRYSQNQLSQFLLCLWKQNLVYWRSPEYNLVRLVFT 1178          
BLAST of CX294747 vs. ExPASy Swiss-Prot
Match: PDR6_ORYSJ (Pleiotropic drug resistance protein 6 OS=Oryza sativa subsp. japonica GN=PDR6 PE=2 SV=2)

HSP 1 Score: 294.278 bits (752), Expect = 3.591e-79
Identity = 148/237 (62.45%), Postives = 176/237 (74.26%), Query Frame = 2
Query:    2 TNAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQVIYAGPLGRQSQKLVEYFEAVPGVPRITNGYNPATWMLEISTPTAEAQLNVDFAEIYVRSSLYQ------------------------RNEELIKELSTPAPGSSDLYFPTQYSQPFLIQCXACFWKQRQSYWRDPQYNALRFAVT 640
            + A+VGLPGV+GLSTEQRKRLTIAVELVANPSI+FMDEPTSGLDAR+AAIVMRTVRN V+TGRT+VCTIHQPSIDIFE+FDEL  MKRGGQ+IYAGPLG +S+ LVE+FEA+PGVP+I +GYNPA WMLE+++   E  L VDFAE Y +S L+Q                        + +E++  LS P   S +L F T+YSQPF  Q  AC WKQ  SYWR+PQY A+RF  T
Sbjct:  964 SGALVGLPGVNGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARSAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGQLIYAGPLGSKSRNLVEFFEAIPGVPKIRDGYNPAAWMLEVTSTQMEQILGVDFAEYYRQSKLFQTQRPFSPLILVSFSLNMFMLWHSRQTQEMVDILSRPRRESKELTFATKYSQPFFAQYAACLWKQNLSYWRNPQYTAVRFFYT 1200          
BLAST of CX294747 vs. ExPASy Swiss-Prot
Match: PDR3_TOBAC (Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum GN=PDR3 PE=2 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 7.999e-79
Identity = 138/206 (66.99%), Postives = 170/206 (82.52%), Query Frame = 2
Query:   11 MVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQVIYAGPLGRQSQKLVEYFEAVPGVPRITNGYNPATWMLEISTPTAEAQLNVDFAEIYVRSSLYQRNEELIKELSTPAPGSSDLYFPTQYSQPFLIQCXACFWKQRQSYWRDPQYNALR 628
            +VG+PGV GLSTEQRKRLTIAVELVANPSIIFMDEPT+GLDAR+AAIVMR V+N  DTGRT+VCTIHQPSIDIFEAFDEL L+K GG++IY G LGR S K++EYFE +  VP+I N +NPATWMLE+++ ++EA +++DFAE+Y  S+L++ NEEL+K+LS P  GS DL+FPT++SQ    Q   CFWKQ  SYWR P YN +R
Sbjct:  990 LVGMPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARSAAIVMRAVKNVADTGRTIVCTIHQPSIDIFEAFDELILLKTGGRMIYWGHLGRNSCKMIEYFEGISCVPKIKNNHNPATWMLEVTSTSSEADISIDFAEVYKNSALHKNNEELVKKLSFPPAGSKDLHFPTRFSQNGWGQFKTCFWKQYWSYWRSPSYNLMR 1195          
BLAST of CX294747 vs. ExPASy Swiss-Prot
Match: AB37G_ARATH (ABC transporter G family member 37 OS=Arabidopsis thaliana GN=ABCG37 PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 2.845e-76
Identity = 135/212 (63.68%), Postives = 170/212 (80.19%), Query Frame = 2
Query:    5 NAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQVIYAGPLGRQSQKLVEYFEAVPGVPRITNGYNPATWMLEISTPTAEAQLNVDFAEIYVRSSLYQRNEELIKELSTPAPGSSDLYFPTQYSQPFLIQCXACFWKQRQSYWRDPQYNALRFAVT 640
            +++VG+ GV GLSTEQRKRLTIAVELVANPSIIFMDEPT+GLDARAAAIVMR V+N  DTGRT+VCTIHQPSIDIFEAFDEL L+KRGG++IY GPLG+ S+ ++EYFE+VP +P+I + +NPATWML++S+ + E +L VDFA+IY  S+LY+RN EL+K+LS P  GSSD+ F   ++Q +  Q  +  WK   SYWR P YN +R   T
Sbjct:  991 DSLVGVTGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNVADTGRTIVCTIHQPSIDIFEAFDELVLLKRGGRMIYTGPLGQHSRHIIEYFESVPEIPKIKDNHNPATWMLDVSSQSVEIELGVDFAKIYHDSALYKRNSELVKQLSQPDSGSSDIQFKRTFAQSWWGQFKSILWKMNLSYWRSPSYNLMRMMHT 1202          
BLAST of CX294747 vs. ExPASy Swiss-Prot
Match: AB33G_ARATH (ABC transporter G family member 33 OS=Arabidopsis thaliana GN=ABCG33 PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 6.338e-76
Identity = 134/212 (63.21%), Postives = 169/212 (79.72%), Query Frame = 2
Query:    5 NAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQVIYAGPLGRQSQKLVEYFEAVPGVPRITNGYNPATWMLEISTPTAEAQLNVDFAEIYVRSSLYQRNEELIKELSTPAPGSSDLYFPTQYSQPFLIQCXACFWKQRQSYWRDPQYNALRFAVT 640
            +A+VG+ GV GLSTEQRKRLT+AVELVANPSIIFMDEPT+GLDARAAAIVMR V+N  +TGRT+VCTIHQPSI IFEAFDEL L+KRGG++IY+GPLG+ S  ++EYF+ +PGV +I + YNPATWMLE+++ + E +L++DFA+IY  S LY+ N EL+KELS P  GSSDL+F   ++Q +  Q  +C WK   SYWR P YN +R   T
Sbjct:  954 DALVGVAGVSGLSTEQRKRLTVAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNVAETGRTIVCTIHQPSIHIFEAFDELVLLKRGGRMIYSGPLGQHSSCVIEYFQNIPGVAKIRDKYNPATWMLEVTSESVETELDMDFAKIYNESDLYKNNSELVKELSKPDHGSSDLHFKRTFAQNWWEQFKSCLWKMSLSYWRSPSYNLMRIGHT 1165          
BLAST of CX294747 vs. ExPASy Swiss-Prot
Match: AB41G_ARATH (ABC transporter G family member 41 OS=Arabidopsis thaliana GN=ABCG41 PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 2.039e-74
Identity = 131/208 (62.98%), Postives = 168/208 (80.77%), Query Frame = 2
Query:    5 NAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQVIYAGPLGRQSQKLVEYFEAVPGVPRITNGYNPATWMLEISTPTAEAQLNVDFAEIYVRSSLYQRNEELIKELSTPAPGSSDLYFPTQYSQPFLIQCXACFWKQRQSYWRDPQYNALR 628
            ++MVGLPG+ GLSTEQRKRLTIAVELV+NPSIIF+DEPT+GLDARAAAIVMR V+N  +TGRTVVCTIHQPSIDIFE FDEL LMK GGQ++Y GPLG+ S K+++YFE++PGVP++    NPATWML+I+  +AE +L +DFA+ Y  S+LY+ N+ ++++LS+ + GS  L FP++YSQ    Q  AC WKQ  SYWR+P +N  R
Sbjct:  938 DSMVGLPGISGLSTEQRKRLTIAVELVSNPSIIFLDEPTTGLDARAAAIVMRAVKNVAETGRTVVCTIHQPSIDIFETFDELILMKDGGQLVYYGPLGKHSSKVIKYFESIPGVPKVQKNCNPATWMLDITCKSAEHRLGMDFAQAYKDSTLYKENKMVVEQLSSASLGSEALSFPSRYSQTGWGQLKACLWKQHCSYWRNPSHNLTR 1145          
BLAST of CX294747 vs. ExPASy Swiss-Prot
Match: PDR13_ORYSJ (Pleiotropic drug resistance protein 13 OS=Oryza sativa subsp. japonica GN=PDR13 PE=3 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 2.254e-73
Identity = 139/211 (65.88%), Postives = 160/211 (75.83%), Query Frame = 2
Query:    8 AMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQVIYAGPLGRQSQKLVEYFEAVPGVPRITNGYNPATWMLEISTPTAEAQLNVDFAEIYVRSSLYQRNEELIKELSTPAPGSSDLYFPTQYSQPFLIQCXACFWKQRQSYWRDPQYNALRFAVT 640
            A+VG  G+ GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDEL LMKRGG+VIY G LG  S  ++ YF+ +P V  IT GYNPATWMLE++T  +E +L +DFA +Y  S  ++  E LI ELS PA G+  L F +++SQ  L Q   C  KQ   YWR P+YN +R   T
Sbjct:  980 ALVGKQGLTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGSLGVNSVDMINYFQGIPRVVPITEGYNPATWMLEVTTQASEERLGIDFATVYKNSYQFRNVENLIVELSIPASGTEPLKFSSEFSQNRLTQFMVCLRKQSLVYWRSPEYNVVRLFFT 1190          
BLAST of CX294747 vs. ExPASy Swiss-Prot
Match: AB30G_ARATH (ABC transporter G family member 30 OS=Arabidopsis thaliana GN=ABCG30 PE=2 SV=2)

HSP 1 Score: 273.863 bits (699), Expect = 5.022e-73
Identity = 128/208 (61.54%), Postives = 167/208 (80.29%), Query Frame = 2
Query:    5 NAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQVIYAGPLGRQSQKLVEYFEAVPGVPRITNGYNPATWMLEISTPTAEAQLNVDFAEIYVRSSLYQRNEELIKELSTPAPGSSDLYFPTQYSQPFLIQCXACFWKQRQSYWRDPQYNALR 628
            +++VGLPG+ GLS EQRKRLTIAVELVANPSIIFMDEPT+GLDARAAAIVMR V+N  +TGRTVVCTIHQPSIDIFE FDEL LMK GGQ++Y GP G+ S K++EYFE+  G+P+I    NPATW+L+I++ +AE +L +DF++ Y  S+LY++N+ ++++LS+ + GS  L FP+Q+SQ   +Q  AC WKQ  SYWR+P +N  R
Sbjct:  941 DSVVGLPGISGLSIEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNVAETGRTVVCTIHQPSIDIFETFDELILMKNGGQLVYYGPPGQNSSKVIEYFESFSGLPKIQKNCNPATWILDITSKSAEEKLGIDFSQSYKDSTLYKQNKMVVEQLSSASLGSEALRFPSQFSQTAWVQLKACLWKQHYSYWRNPSHNITR 1148          
BLAST of CX294747 vs. ExPASy Swiss-Prot
Match: AB43G_ARATH (ABC transporter G family member 43 OS=Arabidopsis thaliana GN=ABCG43 PE=3 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.512e-69
Identity = 123/208 (59.13%), Postives = 162/208 (77.88%), Query Frame = 2
Query:    5 NAMVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQVIYAGPLGRQSQKLVEYFEAVPGVPRITNGYNPATWMLEISTPTAEAQLNVDFAEIYVRSSLYQRNEELIKELSTPAPGSSDLYFPTQYSQPFLIQCXACFWKQRQSYWRDPQYNALR 628
            +++VG+PG+ G++ EQRKRLTIAVELV+NPSIIFMDEPT+GLDARAAAIVMR V+N  +TGRTVVCTIHQPSIDIFEAFDEL LMK GG++IY GPLG+ S K++EYF ++PGVP++    NPATW+L+I++ ++E +L VD A IY  S+L++ N+ +I++    + GS  L   ++Y+Q    Q  AC WKQ  SYWR+P YN  R
Sbjct:  931 DSLVGVPGISGVTAEQRKRLTIAVELVSNPSIIFMDEPTTGLDARAAAIVMRAVKNIAETGRTVVCTIHQPSIDIFEAFDELILMKNGGKIIYYGPLGQHSSKVIEYFMSIPGVPKLKENSNPATWILDITSKSSEDKLGVDLAHIYEESTLFKENKMVIEQTRCTSLGSERLILSSRYAQTSWEQFKACLWKQHLSYWRNPSYNLTR 1138          
The following BLAST results are available for this feature:
BLAST of CX294747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
AB38G_ARATH1.612e-7967.31ABC transporter G family member 38 OS=Arabidopsis ... [more]
AB31G_ARATH2.105e-7968.72ABC transporter G family member 31 OS=Arabidopsis ... [more]
PDR6_ORYSJ3.591e-7962.45Pleiotropic drug resistance protein 6 OS=Oryza sat... [more]
PDR3_TOBAC7.999e-7966.99Pleiotropic drug resistance protein 3 OS=Nicotiana... [more]
AB37G_ARATH2.845e-7663.68ABC transporter G family member 37 OS=Arabidopsis ... [more]
AB33G_ARATH6.338e-7663.21ABC transporter G family member 33 OS=Arabidopsis ... [more]
AB41G_ARATH2.039e-7462.98ABC transporter G family member 41 OS=Arabidopsis ... [more]
PDR13_ORYSJ2.254e-7365.88Pleiotropic drug resistance protein 13 OS=Oryza sa... [more]
AB30G_ARATH5.022e-7361.54ABC transporter G family member 30 OS=Arabidopsis ... [more]
AB43G_ARATH1.512e-6959.13ABC transporter G family member 43 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC05055E01SK FlavSen1 Citrus clementina cDNA clone C05055E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294747 ID=CX294747; Name=CX294747; organism=Citrus clementina; type=EST; length=641bp
GACGAATGCTATGGTTGGCCTTCCAGGAGTAGATGGTCTTTCTACAGAAC
AAAGGAAAAGGTTAACAATAGCTGTAGAATTGGTTGCTAACCCCTCTATA
ATATTCATGGATGAGCCAACATCTGGCCTTGACGCTAGAGCTGCTGCCAT
TGTCATGCGTACTGTGAGAAATACAGTTGATACAGGGAGAACTGTTGTGT
GTACCATACACCAGCCAAGCATAGACATTTTTGAAGCATTTGATGAGCTA
TTTTTGATGAAAAGAGGAGGGCAAGTCATATATGCTGGCCCCCTTGGTCG
CCAGTCTCAGAAGCTCGTAGAATATTTTGAGGCTGTCCCCGGGGTTCCCA
GAATTACGAATGGATACAATCCAGCTACATGGATGCTCGAGATCAGTACT
CCTACGGCTGAGGCTCAATTGAATGTTGATTTTGCGGAGATTTATGTCAG
ATCCTCTCTTTATCAGAGGAACGAAGAACTTATCAAAGAGCTTAGTACTC
CAGCACCAGGCTCCAGTGACCTCTACTTCCCAACCCAATACTCTCAACCC
TTCCTTATTCAATGCANGGCTTGCTTCTGGAAGCAGCGTCAGTCTTATTG
GAGAGACCCTCAGTATAATGCTTTGCGTTTCGCTGTGACAT
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