CX294748
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRA_GRABC (Peptide methionine sulfoxide reductase msrA OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=msrA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.819e-21 Identity = 56/119 (47.06%), Postives = 73/119 (61.34%), Query Frame = 1 Query: 4 GYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQ--KVLNRKIVTEILPAKKFYRAEEYHQQYLAK 354 GY+ G+ NP+Y++VC+GTT H EVV V +DP S+ LL +F HDPTT NRQG DVGTQYRS I + EQE AA+ L + ++ + T I P + FY AE H Y A+ Sbjct: 32 GYAGGHTANPTYKEVCTGTTFHAEVVEVTFDPAILSYVDLLRIFLTIHDPTTPNRQGADVGTQYRSVIMPASTEQENAARGVLAEVEAAQIWQAPLSTTIEPLQIFYPAEPEHVDYFAR 150
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRA_CORGB (Peptide methionine sulfoxide reductase msrA OS=Corynebacterium glutamicum (strain R) GN=msrA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.819e-21 Identity = 54/124 (43.55%), Postives = 72/124 (58.06%), Query Frame = 1 Query: 1 VGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNR----KIVTEI--LPAKKFYRAEEYHQQYLAK 354 VGY+ G+ NP+Y +VCSG T H E+V V YDP + S + L+ HDPT RQGNDVGTQYRS Y E K ++ + L + +I TEI + +++ AE+YHQQYL K Sbjct: 75 VGYAGGFTPNPTYREVCSGRTGHTEIVEVVYDPSKISLEQLVARGLEAHDPTQGFRQGNDVGTQYRSAYYTENEEDAARVKAVVDAYGETLKQHGFGEITTEIGVISPSEYFLAEDYHQQYLDK 198
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRA_BACSU (Peptide methionine sulfoxide reductase msrA OS=Bacillus subtilis GN=msrA PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.819e-21 Identity = 47/119 (39.50%), Postives = 74/119 (62.18%), Query Frame = 1 Query: 4 GYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLER--QQKVLNRKIVTEILPAKKFYRAEEYHQQYLAK 354 GY+ G+ NP+YE+VCS TT H E V++ + P ++ LL++FW + DPT Q D G+ YR+ I+++ +Q++ A+ S +R + + IVT+IL A+ FY AE YHQ + K Sbjct: 34 GYTGGHTENPTYEEVCSETTGHREAVQITFHPDVFPYEKLLELFWQQIDPTDAGGQFADRGSSYRAAIFYHNDKQKELAEASKQRLAESGIFKDPIVTDILKAEPFYEAEGYHQHFYKK 152
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRA_HELHP (Peptide methionine sulfoxide reductase msrA OS=Helicobacter hepaticus GN=msrA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.808e-21 Identity = 50/118 (42.37%), Postives = 69/118 (58.47%), Query Frame = 1 Query: 1 VGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAK 354 VGY+ + NPSYE VCSG + E + + YD ++ F + +P LN QGND+GTQYR+G+YF E KE L+ +K ++K VTE+ + FY AE YHQ+YL K Sbjct: 29 VGYANSAVENPSYEFVCSGNSGAVEALELHYDEDLLPLREIIGRFLSVINPCALNFQGNDIGTQYRNGVYFVQESDESIIKECLKLWEKKHHKKAVTEVEKLQNFYSAELYHQKYLEK 146
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRA_CORML (Peptide methionine sulfoxide reductase msrA OS=Corynebacterium melassecola GN=msrA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.808e-21 Identity = 54/124 (43.55%), Postives = 72/124 (58.06%), Query Frame = 1 Query: 1 VGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNR----KIVTEI--LPAKKFYRAEEYHQQYLAK 354 VGY+ G+ NP+Y +VCSG T H E+V V YDP + S + L+ HDPT RQGNDVGTQYRS Y E K ++ + L + +I TEI + +++ AE+YHQQYL K Sbjct: 75 VGYAGGFTPNPTYREVCSGRTGHTEIVEVVYDPSKISLEQLVARGLEAHDPTQGFRQGNDVGTQYRSAYYTENEEGAARVKAVVDAYGETLKQHGFGEITTEIGVISPSEYFLAEDYHQQYLDK 198
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRA_CORGL (Peptide methionine sulfoxide reductase msrA OS=Corynebacterium glutamicum GN=msrA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.808e-21 Identity = 54/124 (43.55%), Postives = 71/124 (57.26%), Query Frame = 1 Query: 1 VGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNR----KIVTEI--LPAKKFYRAEEYHQQYLAK 354 VGY+ G+ NP+Y +VCSG T H E+V V YDP + S + L+ HDPT RQGNDVGTQYRS Y E K ++ + L + +I TEI + ++ AE+YHQQYL K Sbjct: 75 VGYAGGFTPNPTYREVCSGRTGHTEIVEVVYDPSKISLEQLVARGLEAHDPTQGFRQGNDVGTQYRSAYYTENEEDAARVKAVVDAYGETLKQHGFGEITTEIGVISPSDYFLAEDYHQQYLDK 198
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRA_LACRD (Peptide methionine sulfoxide reductase msrA OS=Lactobacillus reuteri (strain DSM 20016) GN=msrA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.279e-21 Identity = 49/120 (40.83%), Postives = 73/120 (60.83%), Query Frame = 1 Query: 4 GYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAA---KESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAK 354 GY+ G++ NP+YE VCSGTT H E V++ +DP + S+ L++++W + DPT + Q D G YR I+ EQ K A K++L+ + + KIVT I + FY AE+YHQ + K Sbjct: 32 GYTGGHVANPTYEQVCSGTTGHTEAVKITFDPDKISYKDLVEIYWHQTDPTDASGQFQDRGDNYRPVIFVKNDEQRKIAEKSKKALQESGRFGDAKIVTTIEDVQPFYPAEDYHQGFYKK 151
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRA_STRA3 (Peptide methionine sulfoxide reductase msrA OS=Streptococcus agalactiae serotype III GN=msrA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.071e-20 Identity = 47/116 (40.52%), Postives = 74/116 (63.79%), Query Frame = 1 Query: 4 GYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKV--LNRKIVTEILPAKKFYRAEEYHQQY 345 GY+ G++ NP+Y++VCS TT H E V + ++P++ S+ L++++WA+ DPT Q D G YR I++ EQ + A++S ++ Q +R IVT I PA FY AE+YHQ + Sbjct: 30 GYTGGHVENPTYKEVCSKTTGHTEAVEIIFNPEKISYANLVELYWAQTDPTDAFGQFEDRGDNYRPVIFYENEEQRQIAQKSKDKLQASGRFDRPIVTSIEPADTFYPAEDYHQAF 145
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRAB_HELPY (Peptide methionine sulfoxide reductase msrA/msrB OS=Helicobacter pylori GN=msrAB PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.071e-20 Identity = 50/117 (42.74%), Postives = 72/117 (61.54%), Query Frame = 1 Query: 4 GYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAK 354 GY+ G + +YE + ++H E V+V YDPK+ S D LL ++ DP ++N+QGNDVG QYR+GIY+ ++ +L+ QK + KI E+ P K + RAEEYHQ YL K Sbjct: 64 GYANGKTSSTNYEKLHE--SDHAESVKVIYDPKKISLDKLLRYYFKVVDPVSVNKQGNDVGRQYRTGIYYVNSADKEVIDHALKALQKEVKGKIAIEVEPLKNYVRAEEYHQDYLKK 178
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRAB_HELPJ (Peptide methionine sulfoxide reductase msrA/msrB OS=Helicobacter pylori J99 GN=msrAB PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.071e-20 Identity = 50/117 (42.74%), Postives = 72/117 (61.54%), Query Frame = 1 Query: 4 GYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAK 354 GY+ G + +YE + ++H E V+V YDPK+ S D LL ++ DP ++N+QGNDVG QYR+GIY+ ++ +L+ QK + KI E+ P K + RAEEYHQ YL K Sbjct: 64 GYANGKTSSTNYEKLHE--SDHAESVKVIYDPKKISLDKLLRYYFKVIDPVSVNKQGNDVGRQYRTGIYYVNSADKEVIDNALKALQKEVKGKIAIEVEPLKNYVRAEEYHQDYLKK 178 The following BLAST results are available for this feature:
BLAST of CX294748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 315
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294748 ID=CX294748; Name=CX294748; organism=Citrus clementina; type=EST; length=584bpback to top |