CX294748

Overview
NameCX294748
Unique NameCX294748
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length584
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRA_STRS7 (Peptide methionine sulfoxide reductase msrA OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=msrA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.399e-20
Identity = 50/119 (42.02%), Postives = 70/119 (58.82%), Query Frame = 1
Query:    4 GYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKV--LNRKIVTEILPAKKFYRAEEYHQQYLAK 354
            GY+ G++ NPSYE VCS TT H E V + +DP   S+  L++++WA+ DPT    Q  D G  YR  IY+    Q + A+ S +  Q     ++ IVT I PA+ FY AE+YHQ +  K
Sbjct:   30 GYTGGHVPNPSYEQVCSKTTGHTEAVEIIFDPSLISYSDLVELYWAQTDPTDAFGQFEDRGDNYRPVIYYTDERQREIAERSKQTLQASGRFDQPIVTSIKPAEPFYLAEDYHQGFYQK 148          
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRA_STRA5 (Peptide methionine sulfoxide reductase msrA OS=Streptococcus agalactiae serotype V GN=msrA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.399e-20
Identity = 47/116 (40.52%), Postives = 74/116 (63.79%), Query Frame = 1
Query:    4 GYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKV--LNRKIVTEILPAKKFYRAEEYHQQY 345
            GY+ G++ NP+Y++VCS TT H E V + ++P++ S+  L++++WA+ DPT    Q  D G  YR  I++   EQ + A++S ++ Q     +R IVT I PA  FY AE+YHQ +
Sbjct:   30 GYTGGHVENPTYKEVCSKTTGHTEAVEIIFNPEKISYADLVELYWAQTDPTDAFGQFEDRGDNYRPVIFYENEEQRQIAQKSKDKLQASGRFDRPIVTSIEPADTFYPAEDYHQAF 145          
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRA_STRA1 (Peptide methionine sulfoxide reductase msrA OS=Streptococcus agalactiae serotype Ia GN=msrA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.399e-20
Identity = 47/116 (40.52%), Postives = 74/116 (63.79%), Query Frame = 1
Query:    4 GYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKV--LNRKIVTEILPAKKFYRAEEYHQQY 345
            GY+ G++ NP+Y++VCS TT H E V + ++P++ S+  L++++WA+ DPT    Q  D G  YR  I++   EQ + A++S ++ Q     +R IVT I PA  FY AE+YHQ +
Sbjct:   30 GYTGGHVENPTYKEVCSKTTGHTEAVEIIFNPEKISYADLVELYWAQTDPTDAFGQFEDRGDNYRPVIFYENEEQRQIAQKSKDKLQASGRFDRPIVTSIEPADTFYPAEDYHQAF 145          
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRA2_STAAW (Peptide methionine sulfoxide reductase msrA 2 OS=Staphylococcus aureus (strain MW2) GN=msrA2 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.399e-20
Identity = 47/119 (39.50%), Postives = 72/119 (60.50%), Query Frame = 1
Query:    4 GYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAA--KESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAK 354
            GYS G++ NP+YE VC+  T H E V++ +DP+  SF+ +LD+++   DPT    Q  D G  Y+  I+++   Q+KAA  K+    +Q +  + ++T I P K FY AE+YHQ Y  K
Sbjct:   32 GYSGGHVDNPTYEQVCTNQTGHVEAVQITFDPEVTSFENILDIYFKTFDPTDDQGQFFDRGESYQPVIFYHDEHQKKAAEFKKQQLNEQGIFKKPVITPIKPYKNFYPAEDYHQDYYKK 150          
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRA2_STAAS (Peptide methionine sulfoxide reductase msrA 2 OS=Staphylococcus aureus (strain MSSA476) GN=msrA2 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.399e-20
Identity = 47/119 (39.50%), Postives = 72/119 (60.50%), Query Frame = 1
Query:    4 GYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAA--KESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAK 354
            GYS G++ NP+YE VC+  T H E V++ +DP+  SF+ +LD+++   DPT    Q  D G  Y+  I+++   Q+KAA  K+    +Q +  + ++T I P K FY AE+YHQ Y  K
Sbjct:   32 GYSGGHVDNPTYEQVCTNQTGHVEAVQITFDPEVTSFENILDIYFKTFDPTDDQGQFFDRGESYQPVIFYHDEHQKKAAEFKKQQLNEQGIFKKPVITPIKPYKNFYPAEDYHQDYYKK 150          
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRA2_STAAN (Peptide methionine sulfoxide reductase msrA 2 OS=Staphylococcus aureus (strain N315) GN=msrA2 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.399e-20
Identity = 47/119 (39.50%), Postives = 72/119 (60.50%), Query Frame = 1
Query:    4 GYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAA--KESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAK 354
            GYS G++ NP+YE VC+  T H E V++ +DP+  SF+ +LD+++   DPT    Q  D G  Y+  I+++   Q+KAA  K+    +Q +  + ++T I P K FY AE+YHQ Y  K
Sbjct:   32 GYSGGHVDNPTYEQVCTNKTGHVEAVQITFDPEVTSFENILDIYFKTFDPTDDQGQFFDRGESYQPVIFYHDEHQKKAAEFKKQQLNEQGIFKKPVITPIKPYKNFYPAEDYHQDYYKK 150          
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRA2_STAAM (Peptide methionine sulfoxide reductase msrA 2 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=msrA2 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.399e-20
Identity = 47/119 (39.50%), Postives = 72/119 (60.50%), Query Frame = 1
Query:    4 GYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAA--KESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAK 354
            GYS G++ NP+YE VC+  T H E V++ +DP+  SF+ +LD+++   DPT    Q  D G  Y+  I+++   Q+KAA  K+    +Q +  + ++T I P K FY AE+YHQ Y  K
Sbjct:   32 GYSGGHVDNPTYEQVCTNKTGHVEAVQITFDPEVTSFENILDIYFKTFDPTDDQGQFFDRGESYQPVIFYHDEHQKKAAEFKKQQLNEQGIFKKPVITPIKPYKNFYPAEDYHQDYYKK 150          
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRA2_STAA8 (Peptide methionine sulfoxide reductase msrA 2 OS=Staphylococcus aureus (strain NCTC 8325) GN=msrA2 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.399e-20
Identity = 47/119 (39.50%), Postives = 72/119 (60.50%), Query Frame = 1
Query:    4 GYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAA--KESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAK 354
            GYS G++ NP+YE VC+  T H E V++ +DP+  SF+ +LD+++   DPT    Q  D G  Y+  I+++   Q+KAA  K+    +Q +  + ++T I P K FY AE+YHQ Y  K
Sbjct:   32 GYSGGHVDNPTYEQVCTNQTGHVEAVQITFDPEVTSFENILDIYFKTFDPTDDQGQFFDRGESYQPVIFYHDEHQKKAAEFKKQQLNEQGIFKKPVITPIKPYKNFYPAEDYHQDYYKK 150          
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRA_STREM (Peptide methionine sulfoxide reductase msrA OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=msrA PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.827e-20
Identity = 50/119 (42.02%), Postives = 70/119 (58.82%), Query Frame = 1
Query:    4 GYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKV--LNRKIVTEILPAKKFYRAEEYHQQYLAK 354
            GY+ G++ NPSYE VCS TT H E V + +DP   S+  L++++WA+ DPT    Q  D G  YR  IY+    Q + A+ S +  Q     ++ IVT I PA+ FY AE+YHQ +  K
Sbjct:   30 GYTGGHVPNPSYEQVCSKTTGHTEAVEIIFDPSLISYSDLVELYWAQTDPTDAFGQFEDRGDNYRPVIYYTDERQREIAERSKQSLQASGRFDQPIVTSIEPAEPFYLAEDYHQGFYQK 148          
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRA2_STAAR (Peptide methionine sulfoxide reductase msrA 2 OS=Staphylococcus aureus (strain MRSA252) GN=msrA2 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.386e-20
Identity = 47/119 (39.50%), Postives = 71/119 (59.66%), Query Frame = 1
Query:    4 GYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAA--KESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAK 354
            GYS G+  NP+YE VC+  T H E V++ +DP+  SF+ +LD+++   DPT    Q  D G  Y+  I+++   Q+KAA  K+    +Q +  + ++T I P K FY AE+YHQ Y  K
Sbjct:   32 GYSGGHADNPTYEQVCTNQTGHVEAVQITFDPEVTSFENILDIYFKTFDPTDDQGQFFDRGESYQPVIFYHDKHQKKAAEFKKQQLNEQGIFKKPVITPIKPYKNFYPAEDYHQDYYKK 150          
The following BLAST results are available for this feature:
BLAST of CX294748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 315
Match NameE-valueIdentityDescription
MSRA_STRS71.399e-2042.02Peptide methionine sulfoxide reductase msrA OS=Str... [more]
MSRA_STRA51.399e-2040.52Peptide methionine sulfoxide reductase msrA OS=Str... [more]
MSRA_STRA11.399e-2040.52Peptide methionine sulfoxide reductase msrA OS=Str... [more]
MSRA2_STAAW1.399e-2039.50Peptide methionine sulfoxide reductase msrA 2 OS=S... [more]
MSRA2_STAAS1.399e-2039.50Peptide methionine sulfoxide reductase msrA 2 OS=S... [more]
MSRA2_STAAN1.399e-2039.50Peptide methionine sulfoxide reductase msrA 2 OS=S... [more]
MSRA2_STAAM1.399e-2039.50Peptide methionine sulfoxide reductase msrA 2 OS=S... [more]
MSRA2_STAA81.399e-2039.50Peptide methionine sulfoxide reductase msrA 2 OS=S... [more]
MSRA_STREM1.827e-2042.02Peptide methionine sulfoxide reductase msrA OS=Str... [more]
MSRA2_STAAR2.386e-2039.50Peptide methionine sulfoxide reductase msrA 2 OS=S... [more]

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Properties
Property NameValue
Genbank descriptionC05055E02SK FlavSen1 Citrus clementina cDNA clone C05055E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294748 ID=CX294748; Name=CX294748; organism=Citrus clementina; type=EST; length=584bp
GTTGGGTACAGCCAAGGCTACTTGCATAACCCTAGCTACGAGGACGTGTG
CAGTGGGACTACCAATCATAATGAAGTTGTTAGGGTTCAGTATGATCCTA
AGGAGTGTAGTTTCGATACTTTGCTTGATATGTTTTGGGCTCGCCATGAT
CCTACCACGCTTAATCGGCAGGGTAATGATGTTGGAACACAGTACAGATC
TGGAATTTATTTTTACACTCCTGAGCAAGAGAAGGCAGCCAAGGAGTCCT
TGGAGAGACAGCAGAAGGTCTTGAACAGGAAAATTGTCACCGAAATCCTA
CCTGCCAAGAAGTTCTACCGAGCTGAGGAATACCACCAGCAGTATCTTGC
AAAAGGGGGTCGATTTGGATTCAAACAATCTACTGAGAAAGGCTGCAATG
ATCCTATCAGGTGCTATGGCTAAATAGTACCCTGCTATTACAGTTAATTT
TCAGCTTTTTTCTGAATCTTAGCCATTATAACTTGCATTCTTGCTATGAT
AAGAATGCCAGATGTATTTAGTGTCTGAACTTGGGTATGTAACTAGTCAT
AGTCTCTTAAACCATCATCTATATCTGTAATTTC
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