CX294748

Overview
NameCX294748
Unique NameCX294748
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length584
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRA1_RHILO (Peptide methionine sulfoxide reductase msrA 1 OS=Rhizobium loti GN=msrA1 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.116e-20
Identity = 53/120 (44.17%), Postives = 74/120 (61.67%), Query Frame = 1
Query:    1 VGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLE--RQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAK 354
            VGYS G + N +Y +   GT  H E + + +DP   S+ TLL+ F+  HDPTT NRQGNDVG  YRS IY+ + EQ++ A++++       +   K+VTE+ PA  F+ AE  HQ YL K
Sbjct:   33 VGYSGGDVANATYRN--HGT--HAEAIEINFDPAVISYRTLLERFFQIHDPTTRNRQGNDVGMSYRSAIYYTSDEQKRVAEDTIADVDASGLWPGKVVTEVAPAGAFWEAEPEHQDYLEK 148          
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRA_YEAST (Peptide methionine sulfoxide reductase OS=Saccharomyces cerevisiae GN=MXR1 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.070e-20
Identity = 51/107 (47.66%), Postives = 63/107 (58.88%), Query Frame = 1
Query:   34 SYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAK 354
            SY+ VC G T+  EV++V Y+PK  +   L D F+  HDPTT N QG D GTQYRSG++ ++    K   +  E  Q     KI T I P K FY AEEYHQ YL K
Sbjct:   63 SYKRVCGGDTDFAEVLQVSYNPKVITLRELTDFFFRIHDPTTSNSQGPDKGTQYRSGLFAHSDADLKELAKIKEEWQPKWGNKIATVIEPIKNFYDAEEYHQLYLDK 169          
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRA_STAAC (Peptide methionine sulfoxide reductase msrA OS=Staphylococcus aureus (strain COL) GN=msrA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.070e-20
Identity = 47/119 (39.50%), Postives = 75/119 (63.03%), Query Frame = 1
Query:    4 GYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLN--RKIVTEILPAKKFYRAEEYHQQYLAK 354
            GY  G++ NP+YE V SGT+ H E V +QYD    S++ LL++F++  DP     Q  D G QY++ I++    Q++ A+  +E+ +  +N  + I T+ILPA +FY+AE+YHQ +  K
Sbjct:   32 GYMGGHIENPTYEQVKSGTSGHLETVEIQYDVALFSYNKLLEIFFSVIDPLDTGGQYQDRGPQYQTAIFYTNDHQKELAETYIEQLKNTINADKAIATKILPASQFYKAEDYHQDFYKK 150          
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRA1_STAAW (Peptide methionine sulfoxide reductase msrA 1 OS=Staphylococcus aureus (strain MW2) GN=msrA1 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.070e-20
Identity = 47/119 (39.50%), Postives = 75/119 (63.03%), Query Frame = 1
Query:    4 GYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLN--RKIVTEILPAKKFYRAEEYHQQYLAK 354
            GY  G++ NP+YE V SGT+ H E V +QYD    S++ LL++F++  DP     Q  D G QY++ I++    Q++ A+  +E+ +  +N  + I T+ILPA +FY+AE+YHQ +  K
Sbjct:   32 GYMGGHIENPTYEQVKSGTSGHLETVEIQYDVALFSYNKLLEIFFSVIDPLDTGGQYQDRGPQYQTAIFYTNDHQKELAETYIEQLKNTINADKAIATKILPASQFYKAEDYHQDFYKK 150          
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRA1_STAAS (Peptide methionine sulfoxide reductase msrA 1 OS=Staphylococcus aureus (strain MSSA476) GN=msrA1 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.070e-20
Identity = 47/119 (39.50%), Postives = 75/119 (63.03%), Query Frame = 1
Query:    4 GYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLN--RKIVTEILPAKKFYRAEEYHQQYLAK 354
            GY  G++ NP+YE V SGT+ H E V +QYD    S++ LL++F++  DP     Q  D G QY++ I++    Q++ A+  +E+ +  +N  + I T+ILPA +FY+AE+YHQ +  K
Sbjct:   32 GYMGGHIENPTYEQVKSGTSGHLETVEIQYDVALFSYNKLLEIFFSVIDPLDTGGQYQDRGPQYQTAIFYTNDHQKELAETYIEQLKNTINADKAIATKILPASQFYKAEDYHQDFYKK 150          
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRA1_STAAR (Peptide methionine sulfoxide reductase msrA 1 OS=Staphylococcus aureus (strain MRSA252) GN=msrA1 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.070e-20
Identity = 47/119 (39.50%), Postives = 75/119 (63.03%), Query Frame = 1
Query:    4 GYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLN--RKIVTEILPAKKFYRAEEYHQQYLAK 354
            GY  G++ NP+YE V SGT+ H E V +QYD    S++ LL++F++  DP     Q  D G QY++ I++    Q++ A+  +E+ +  +N  + I T+ILPA +FY+AE+YHQ +  K
Sbjct:   32 GYMGGHIENPTYEQVKSGTSGHLETVEIQYDVALFSYNKLLEIFFSVIDPLDTGGQYQDRGPQYQTAIFYTNDHQKELAETYIEQLKNTINADKAIATKILPASQFYKAEDYHQDFYKK 150          
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRA1_STAAN (Peptide methionine sulfoxide reductase msrA 1 OS=Staphylococcus aureus (strain N315) GN=msrA1 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.070e-20
Identity = 47/119 (39.50%), Postives = 75/119 (63.03%), Query Frame = 1
Query:    4 GYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLN--RKIVTEILPAKKFYRAEEYHQQYLAK 354
            GY  G++ NP+YE V SGT+ H E V +QYD    S++ LL++F++  DP     Q  D G QY++ I++    Q++ A+  +E+ +  +N  + I T+ILPA +FY+AE+YHQ +  K
Sbjct:   32 GYMGGHIENPTYEQVKSGTSGHLETVEIQYDVALFSYNKLLEIFFSVIDPLDTGGQYQDRGPQYQTAIFYTNDHQKELAETYIEQLKNTINADKAIATKILPASQFYKAEDYHQDFYKK 150          
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRA1_STAAM (Peptide methionine sulfoxide reductase msrA 1 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=msrA1 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.070e-20
Identity = 47/119 (39.50%), Postives = 75/119 (63.03%), Query Frame = 1
Query:    4 GYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLN--RKIVTEILPAKKFYRAEEYHQQYLAK 354
            GY  G++ NP+YE V SGT+ H E V +QYD    S++ LL++F++  DP     Q  D G QY++ I++    Q++ A+  +E+ +  +N  + I T+ILPA +FY+AE+YHQ +  K
Sbjct:   32 GYMGGHIENPTYEQVKSGTSGHLETVEIQYDVALFSYNKLLEIFFSVIDPLDTGGQYQDRGPQYQTAIFYTNDHQKELAETYIEQLKNTINADKAIATKILPASQFYKAEDYHQDFYKK 150          
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRA1_STAA8 (Peptide methionine sulfoxide reductase msrA 1 OS=Staphylococcus aureus (strain NCTC 8325) GN=msrA1 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.070e-20
Identity = 47/119 (39.50%), Postives = 75/119 (63.03%), Query Frame = 1
Query:    4 GYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLN--RKIVTEILPAKKFYRAEEYHQQYLAK 354
            GY  G++ NP+YE V SGT+ H E V +QYD    S++ LL++F++  DP     Q  D G QY++ I++    Q++ A+  +E+ +  +N  + I T+ILPA +FY+AE+YHQ +  K
Sbjct:   32 GYMGGHIENPTYEQVKSGTSGHLETVEIQYDVALFSYNKLLEIFFSVIDPLDTGGQYQDRGPQYQTAIFYTNDHQKELAETYIEQLKNTINADKAIATKILPASQFYKAEDYHQDFYKK 150          
BLAST of CX294748 vs. ExPASy Swiss-Prot
Match: MSRA_LISMO (Peptide methionine sulfoxide reductase msrA OS=Listeria monocytogenes GN=msrA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.943e-20
Identity = 47/120 (39.17%), Postives = 75/120 (62.50%), Query Frame = 1
Query:    4 GYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKAAKES---LERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAK 354
            GY+ G+  NP+Y++VCSGTT H E +++ +DP    ++ L++++W + DPT    Q  D G  YR  I+++  EQ++ A++S   L+   +   + IVTEI  A+ FY AEEYHQ +  K
Sbjct:   35 GYTGGHTVNPTYKEVCSGTTGHTEAIQITFDPAVFPYEKLVEVYWQQTDPTDAAGQFVDRGDSYRPVIFYHNEEQKEIAEKSKAALDASGR-FKKPIVTEIAKAETFYPAEEYHQDFYKK 153          
The following BLAST results are available for this feature:
BLAST of CX294748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 315
Match NameE-valueIdentityDescription
MSRA1_RHILO3.116e-2044.17Peptide methionine sulfoxide reductase msrA 1 OS=R... [more]
MSRA_YEAST4.070e-2047.66Peptide methionine sulfoxide reductase OS=Saccharo... [more]
MSRA_STAAC4.070e-2039.50Peptide methionine sulfoxide reductase msrA OS=Sta... [more]
MSRA1_STAAW4.070e-2039.50Peptide methionine sulfoxide reductase msrA 1 OS=S... [more]
MSRA1_STAAS4.070e-2039.50Peptide methionine sulfoxide reductase msrA 1 OS=S... [more]
MSRA1_STAAR4.070e-2039.50Peptide methionine sulfoxide reductase msrA 1 OS=S... [more]
MSRA1_STAAN4.070e-2039.50Peptide methionine sulfoxide reductase msrA 1 OS=S... [more]
MSRA1_STAAM4.070e-2039.50Peptide methionine sulfoxide reductase msrA 1 OS=S... [more]
MSRA1_STAA84.070e-2039.50Peptide methionine sulfoxide reductase msrA 1 OS=S... [more]
MSRA_LISMO6.943e-2039.17Peptide methionine sulfoxide reductase msrA OS=Lis... [more]

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Properties
Property NameValue
Genbank descriptionC05055E02SK FlavSen1 Citrus clementina cDNA clone C05055E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294748 ID=CX294748; Name=CX294748; organism=Citrus clementina; type=EST; length=584bp
GTTGGGTACAGCCAAGGCTACTTGCATAACCCTAGCTACGAGGACGTGTG
CAGTGGGACTACCAATCATAATGAAGTTGTTAGGGTTCAGTATGATCCTA
AGGAGTGTAGTTTCGATACTTTGCTTGATATGTTTTGGGCTCGCCATGAT
CCTACCACGCTTAATCGGCAGGGTAATGATGTTGGAACACAGTACAGATC
TGGAATTTATTTTTACACTCCTGAGCAAGAGAAGGCAGCCAAGGAGTCCT
TGGAGAGACAGCAGAAGGTCTTGAACAGGAAAATTGTCACCGAAATCCTA
CCTGCCAAGAAGTTCTACCGAGCTGAGGAATACCACCAGCAGTATCTTGC
AAAAGGGGGTCGATTTGGATTCAAACAATCTACTGAGAAAGGCTGCAATG
ATCCTATCAGGTGCTATGGCTAAATAGTACCCTGCTATTACAGTTAATTT
TCAGCTTTTTTCTGAATCTTAGCCATTATAACTTGCATTCTTGCTATGAT
AAGAATGCCAGATGTATTTAGTGTCTGAACTTGGGTATGTAACTAGTCAT
AGTCTCTTAAACCATCATCTATATCTGTAATTTC
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