CX294749
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294749 vs. ExPASy Swiss-Prot
Match: H2AZ_ASPFU (Histone H2A.Z OS=Aspergillus fumigatus GN=htz1 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.682e-30 Identity = 68/103 (66.02%), Postives = 78/103 (75.73%), Query Frame = 1 Query: 238 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 546 S S++AGLQFP GRV R LK Y A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+P I+++L+ K Sbjct: 25 SHSAKAGLQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPRINRALLLK 127
BLAST of CX294749 vs. ExPASy Swiss-Prot
Match: H2AZ_ASPCL (Histone H2A.Z OS=Aspergillus clavatus GN=HTZ1 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.682e-30 Identity = 68/103 (66.02%), Postives = 78/103 (75.73%), Query Frame = 1 Query: 238 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 546 S S++AGLQFP GRV R LK Y A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+P I+++L+ K Sbjct: 25 SHSAKAGLQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPRINRALLLK 127
BLAST of CX294749 vs. ExPASy Swiss-Prot
Match: H2AZ_PHANO (Histone H2A.Z OS=Phaeosphaeria nodorum GN=HTZ1 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.809e-30 Identity = 67/103 (65.05%), Postives = 79/103 (76.70%), Query Frame = 1 Query: 238 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 546 S S++AGLQFP GR+ R L+ Y A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+PHI+++L+ K Sbjct: 25 SHSAKAGLQFPCGRIKRHLRTITRQKTRIGAKASIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPHINRALLLK 127
BLAST of CX294749 vs. ExPASy Swiss-Prot
Match: H2AZ_COCIM (Histone H2A.Z OS=Coccidioides immitis GN=HTZ1 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.809e-30 Identity = 67/103 (65.05%), Postives = 78/103 (75.73%), Query Frame = 1 Query: 238 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 546 S S++AGLQFP GR+ R LK Y A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+P I+++L+ K Sbjct: 25 SHSAKAGLQFPCGRIKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPRINRALLLK 127
BLAST of CX294749 vs. ExPASy Swiss-Prot
Match: H2AZ_ASPTN (Histone H2A.Z OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=HTZ1 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.117e-29 Identity = 67/103 (65.05%), Postives = 77/103 (74.76%), Query Frame = 1 Query: 238 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 546 S S++AGLQFP G V R LK Y A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+P I+++L+ K Sbjct: 25 SHSAKAGLQFPRGSVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPRINRALLLK 127
BLAST of CX294749 vs. ExPASy Swiss-Prot
Match: H2AX_MOUSE (Histone H2A.x OS=Mus musculus GN=H2afx PE=1 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.226e-25 Identity = 66/106 (62.26%), Postives = 77/106 (72.64%), Query Frame = 1 Query: 238 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSS 552 SRSSRAGLQFPVGRVHRLL++ Y AA+LEYLTAE+LELAGNA++D K RI PRHLQLAIR DEEL+ L+ G TIA GGV+P+I L+ K S Sbjct: 17 SRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPV-YLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKS 121
BLAST of CX294749 vs. ExPASy Swiss-Prot
Match: H2A8_ARATH (Putative histone H2A.8 OS=Arabidopsis thaliana GN=At4g13570 PE=5 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.226e-25 Identity = 60/91 (65.93%), Postives = 64/91 (70.33%), Query Frame = 1 Query: 256 GLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIH 528 G F V R+H+ LK Y +ILEYLT EVL+LA N SKDLKVKRITPRHLQLAIRGDEELDTLIKGTI GG VIPHIH Sbjct: 28 GEMFQVARIHKQLKNRVSAHSSVGATDVVYMTSILEYLTTEVLQLAENTSKDLKVKRITPRHLQLAIRGDEELDTLIKGTIIGGSVIPHIH 118
BLAST of CX294749 vs. ExPASy Swiss-Prot
Match: H2A1A_HUMAN (Histone H2A type 1-A OS=Homo sapiens GN=HIST1H2AA PE=1 SV=3) HSP 1 Score: 116.316 bits (290), Expect = 1.226e-25 Identity = 65/107 (60.75%), Postives = 78/107 (72.90%), Query Frame = 1 Query: 238 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSSK 555 SRSSRAGLQFPVGR+HRLL++ Y AA+LEYLTAE+LELAGNAS+D K RI PRHLQLAIR DEEL+ L+ G TIA GGV+P+I L+ K ++ Sbjct: 17 SRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPV-YLAAVLEYLTAEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTE 122
BLAST of CX294749 vs. ExPASy Swiss-Prot
Match: H2A_URECA (Histone H2A OS=Urechis caupo PE=3 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 2.731e-25 Identity = 64/108 (59.26%), Postives = 77/108 (71.30%), Query Frame = 1 Query: 238 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSSKE 558 SRSSRAGLQFPVGR+HRLL++ Y AA++EYL AEVLELAGNA++D K RI PRHLQLAIR DEEL+ L+ G TIA GGV+P+I L+ K S + Sbjct: 16 SRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPV-YLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKSSQ 122
BLAST of CX294749 vs. ExPASy Swiss-Prot
Match: H2A_MYTTR (Histone H2A OS=Mytilus trossulus PE=3 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 2.731e-25 Identity = 64/108 (59.26%), Postives = 78/108 (72.22%), Query Frame = 1 Query: 238 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSSKE 558 SRSSRAGLQFPVGR+HRLL++ Y AA+LEYL AEVLELAGNA++D K RI PRHLQLAIR DEEL+ L+ G TIA GGV+P+I L+ K +++ Sbjct: 16 SRSSRAGLQFPVGRIHRLLRKGNYAGRVGAGAPV-YLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTQK 122 The following BLAST results are available for this feature:
BLAST of CX294749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 241
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294749 ID=CX294749; Name=CX294749; organism=Citrus clementina; type=EST; length=611bpback to top |