CX294756

Overview
NameCX294756
Unique NameCX294756
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294756 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.151e-11
Identity = 49/145 (33.79%), Postives = 63/145 (43.45%), Query Frame = 1
Query:  223 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYAT 648
            RA  AEF +TL +VF G G+ + +          P                      +ISG HVNPAVTF   VG  +SLLR   Y  AQLLG+     +L  VT        AL++   GV    A   EI +T   V  ++AT
Sbjct:   11 RAIFAEFFATLFYVFFGLGASLRWTP-------GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATTVEIFLTLQFVLCIFAT 148          
BLAST of CX294756 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.151e-11
Identity = 46/147 (31.29%), Postives = 70/147 (47.62%), Query Frame = 1
Query:  223 RAALAEFISTLIFVFAGEGSGMAFNKLTHNG--ANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTN---GQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYAT 648
            RA +AEF++  +F+F   GS + F     N   +                         +ISG H+NPAVT G  +   IS+LR ++Y IAQ +G+ VA  +L  +T+   G +    +L+ GV +   +  EI+ T  LV  V AT
Sbjct:   12 RAVVAEFLAMTLFIFISIGSALGFQYPVRNNQTSGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSSLPGNSLGLNSLAPGVDSGQGLGIEIIGTLQLVLCVLAT 158          
BLAST of CX294756 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.503e-11
Identity = 48/151 (31.79%), Postives = 72/151 (47.68%), Query Frame = 1
Query:  223 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX------NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYA 645
            RA +AEFI+TL+F++    + + +   T   A+                               ISGGH+NPAVTFG F+   +SL+R +LY +AQ LG+     L+K   +         A +L+SG      +  EI+ TF LVYTV++
Sbjct:   42 RAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKAFQSAYFDRYGGGANSLASGYSRGTGLGAEIIGTFVLVYTVFS 192          
BLAST of CX294756 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.503e-11
Identity = 46/145 (31.72%), Postives = 64/145 (44.14%), Query Frame = 1
Query:  223 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYAT 648
            RA  AEF  T+ +VF G G+ + +       A  P+                     ++SG H+NPAVTF   +G  +SL R I Y  AQLLG+     +L  VT        AL++   GV    A   EI +T   V  ++AT
Sbjct:   11 RAVFAEFFGTMFYVFFGLGASLKW-------AAGPANVLVIALAFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAIRGNLALNTLHPGVSLGQATTVEIFLTLQFVLCIFAT 148          
BLAST of CX294756 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.963e-11
Identity = 48/145 (33.10%), Postives = 66/145 (45.52%), Query Frame = 1
Query:  223 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ---TTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYAT 648
            RA  AEF++TL+FVF G GS +       N                           +ISG H+NPAVT    VG ++S+LR   Y  AQLLG+     LL  +T        +  ALS+   A  AV  E+ +T  LV  ++A+
Sbjct:   11 RAVFAEFLATLLFVFFGLGSAL-------NWPQALPSVLQIAMAFGLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNALSNSTTAGQAVTVELFLTLQLVLCIFAS 148          
BLAST of CX294756 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.374e-11
Identity = 44/146 (30.14%), Postives = 68/146 (46.58%), Query Frame = 1
Query:  220 LRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGAWNAVVFEIVMTFGLVYTVYAT 648
            L+A  AEF++TLIFVF G  S + +        +                         +SGGH+NPA+T    VG  ISLLR + Y +AQL+G+     +L  +  G      A   L++      AVV E+++TF L   ++++
Sbjct:   11 LKAVFAEFLATLIFVFFGLASALKW-------PSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPGNARGNLAVNSLNNNTTPGQAVVVEMILTFQLALCIFSS 149          
BLAST of CX294756 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 5.713e-11
Identity = 49/145 (33.79%), Postives = 70/145 (48.28%), Query Frame = 1
Query:  223 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK-FVTNGQTT---SAFALSSGVGAWNAVVFEIVMTFGLVYTVYA 645
            RA +AEFI+TL+F++    + +   K T  G                           ISGGH+NPAVTFG F+   +SL+R + Y IAQ LG+      +K F+     T    A  ++ G     A+  EI+ TF LVYTV++
Sbjct:   38 RALIAEFIATLLFLYVTVATVIGHKKQT--GPCDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALGYMIAQCLGAICGVGFVKAFMKTPYNTLGGGANTVADGYSKGTALGAEIIGTFVLVYTVFS 180          
BLAST of CX294756 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.461e-11
Identity = 46/151 (30.46%), Postives = 72/151 (47.68%), Query Frame = 1
Query:  223 RAALAEFISTLIFVFAGEGSGMAFNKLTH---NGANTPSXXXXXXXXXXXXXXXXXXXXX---NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK----FVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYA 645
            RA +AEF++TL+F++    + + +   T    NGA+                            +SGGH+NPAVT G F+   +SL+R +LY  AQ LG+     L+K     + +     A  L++G      +  EI+ TF LVYTV++
Sbjct:   39 RALIAEFVATLLFLYVTVATVIGYKHQTDAAVNGADAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVSLVRALLYMAAQCLGAICGVALVKGFQSSLYDRYGGGANELAAGYSTGTGLAAEIIGTFVLVYTVFS 189          
BLAST of CX294756 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.744e-11
Identity = 47/146 (32.19%), Postives = 69/146 (47.26%), Query Frame = 1
Query:  220 LRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT--NGQTTSAF-ALSSGVGAWNAVVFEIVMTFGLVYTVYAT 648
            L+A  AEF++TLIFVF G GS + +        +                         +SGGH+NPA+T    VG  ISLLR   Y  AQL+G+     +L  V   N +   A  AL++      A+V E+++TF L   ++A+
Sbjct:   11 LKAVFAEFLATLIFVFFGLGSALKW-------PSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFAS 149          
The following BLAST results are available for this feature:
BLAST of CX294756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
MIP_CANFA1.151e-1133.79Lens fiber major intrinsic protein OS=Canis famili... [more]
AQP1_PIG1.151e-1131.29Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
PIP21_MAIZE1.503e-1131.79Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
MIP_RANPI1.503e-1131.72Lens fiber major intrinsic protein OS=Rana pipiens... [more]
AQP2_HUMAN1.963e-1133.10Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]
AQP5_PIG4.374e-1130.14Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
PIP27_ARATH5.713e-1133.79Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]
PIP24_ORYSJ7.461e-1130.46Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
AQP5_HUMAN9.744e-1132.19Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05055E10SK FlavSen1 Citrus clementina cDNA clone C05055E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294756 ID=CX294756; Name=CX294756; organism=Citrus clementina; type=EST; length=658bp
AAATTTATTGTACAACCGGAAACCGGCTTTAACCGCCTCCCAAAAACTAC
GCATTTCGAATATAAGTAGAAGCTCCTAGTTGAGAAGTGGAGACCAGTAC
ACTTACGTGAACCAGTAGTAATCACACCCCAAAGGTTCAATCTTCATCGT
TTGATCTCCATCATGCCGATCAGAAACATTGCCGTTGGCCATCCCCGTGA
GGCGACTCATCCAGATGCCCTAAGGGCAGCCCTAGCAGAGTTCATCTCAA
CTCTAATATTTGTCTTTGCCGGTGAAGGCTCGGGCATGGCCTTCAACAAG
CTCACTCACAACGGCGCCAACACCCCCTCCGGCCTCGTCGCCGCCTCTGT
TGCTCACGCTTTCGCCCTTTTCGTTGCTGTCGCCGTTGGCGCCAACATTT
CCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCGCCTTCGTTGGAGGT
AACATCTCCCTTCTACGAGGCATCCTCTACTGGATCGCCCAGCTTCTTGG
ATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTACCAACGGCCAGACCA
CATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGCATGGAACGCAGTCGTT
TTCGAGATCGTGATGACATTCGGACTAGTGTACACAGTGTATGCCACAGC
CCTGGACC
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