CX294765

Overview
NameCX294765
Unique NameCX294765
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length393
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294765 vs. ExPASy Swiss-Prot
Match: CGL_RAT (Cystathionine gamma-lyase OS=Rattus norvegicus GN=Cth PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 6.730e-20
Identity = 49/112 (43.75%), Postives = 72/112 (64.29%), Query Frame = 2
Query:    2 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 337
            +V++V YPGL SHP+H +A +Q TG  G+VSF + G L     F+  +K+  +A S GG ES+ + PAIM++  + + +R   GI D L+R S G+ED +DL  D+ QAL A
Sbjct:  284 RVEKVIYPGLPSHPQHELAKRQCTGCPGMVSFYIKGTLQHAQVFLKNIKLFALAESLGGYESLAELPAIMTHASVPEKDRATLGISDTLIRLSVGLEDEKDLLEDLGQALKA 395          
BLAST of CX294765 vs. ExPASy Swiss-Prot
Match: METC_LACLC (Cystathionine beta-lyase OS=Lactococcus lactis subsp. cremoris GN=metC PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.958e-19
Identity = 48/109 (44.04%), Postives = 71/109 (65.14%), Query Frame = 2
Query:    5 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 331
            V +V+YPGL +H  H IA +QMT FGG++SFE+  D  A   F++ L+   +A S GG ES+++ PA+M++  + +  R + GI D L+R S GVE  EDL  D+ +AL
Sbjct:  270 VSKVYYPGLVNHEGHEIAKKQMTAFGGMISFELT-DENAVKNFVENLRYFTLAESLGGVESLIEVPAVMTHASIPKELREEIGIKDGLIRLSVGVEALEDLLTDLKEAL 377          
BLAST of CX294765 vs. ExPASy Swiss-Prot
Match: METB_HELPJ (Cystathionine gamma-synthase OS=Helicobacter pylori J99 GN=metB PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.557e-19
Identity = 49/113 (43.36%), Postives = 72/113 (63.72%), Query Frame = 2
Query:    2 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 340
            KV+RV+YPGL +HP H +A  QM GF G+ SF +  D  A + F+++LK+  +  S GG ES+V  PA+M++  + +++R   GI D LVR S G+E  +DL  D+ QA   I
Sbjct:  268 KVERVYYPGLPTHPNHELAKAQMRGFSGMFSFTLKNDSEA-VAFVESLKLFILGESLGGVESLVGIPALMTHACIPKAQREAAGIRDGLVRLSVGIEHEQDLLEDLDQAFAKI 379          
BLAST of CX294765 vs. ExPASy Swiss-Prot
Match: CGL_MACFA (Cystathionine gamma-lyase OS=Macaca fascicularis GN=CTH PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.557e-19
Identity = 49/111 (44.14%), Postives = 73/111 (65.77%), Query Frame = 2
Query:    5 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 337
            V++V YPGL SHP+H +A +Q TG  G+++F + G L     F+  LK+  +A S GG ES+V+ PAIM++  + +++R   GI D L+R S G+ED +DL  D+ QAL A
Sbjct:  286 VEKVIYPGLPSHPQHELAKRQCTGCTGMITFYIKGTLQHAEIFLKNLKLFTLAESLGGFESLVELPAIMTHASVPKNDRDVLGISDTLIRLSVGLEDEKDLLEDLDQALKA 396          
BLAST of CX294765 vs. ExPASy Swiss-Prot
Match: CGL_MOUSE (Cystathionine gamma-lyase OS=Mus musculus GN=Cth PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.340e-19
Identity = 48/112 (42.86%), Postives = 72/112 (64.29%), Query Frame = 2
Query:    2 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 337
            +V++V YPGL SHP+H +A +Q +G  G+VSF + G L     F+  LK+  +A S GG ES+ + PAIM++  + + +R   GI D L+R S G+ED +DL  D+ +AL A
Sbjct:  284 RVEKVVYPGLPSHPQHELAKRQCSGCPGMVSFYIKGALQHAKAFLKNLKLFTLAESLGGYESLAELPAIMTHASVPEKDRATLGINDTLIRLSVGLEDEQDLLEDLDRALKA 395          
BLAST of CX294765 vs. ExPASy Swiss-Prot
Match: METB_HELPY (Cystathionine gamma-synthase OS=Helicobacter pylori GN=metB PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.697e-19
Identity = 48/113 (42.48%), Postives = 73/113 (64.60%), Query Frame = 2
Query:    2 KVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 340
            KV+RV+YPGL +HP + +A +QM GF G++SF +  D  A + F+++LK+  +  S GG ES+V  PA M++  + +++R   GI D LVR S G+E  +DL  D+ QA   I
Sbjct:  268 KVERVYYPGLPTHPNYELAKKQMRGFSGMLSFTLKNDSEA-VAFVESLKLFILGESLGGVESLVGIPAFMTHACIPKTQREAAGIRDGLVRLSVGIEHEQDLLEDLEQAFAKI 379          
BLAST of CX294765 vs. ExPASy Swiss-Prot
Match: CGL_HUMAN (Cystathionine gamma-lyase OS=Homo sapiens GN=CTH PE=1 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 7.441e-19
Identity = 49/111 (44.14%), Postives = 71/111 (63.96%), Query Frame = 2
Query:    5 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHA 337
            V++V YPGL SHP+H +  +Q TG  G+V+F + G L     F+  LK+  +A S GG ES+ + PAIM++  + +++R   GI D L+R S G+ED EDL  D+ QAL A
Sbjct:  286 VEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGTLQHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKA 396          
BLAST of CX294765 vs. ExPASy Swiss-Prot
Match: MCCB_BACSU (Cystathionine gamma-lyase OS=Bacillus subtilis GN=mccB PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.828e-18
Identity = 47/112 (41.96%), Postives = 68/112 (60.71%), Query Frame = 2
Query:    5 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 340
            V+ ++YPG  +HP H +A  Q  GFGG++SF++ G       F+  LK+  IA S G  ES++  PA M++  + +  RL+ GI D L+R S G+ED EDL  D+ QAL  I
Sbjct:  269 VQTLYYPGSSNHPGHELAKTQGAGFGGMISFDI-GSEERVDAFLGNLKLFTIAESLGAVESLISVPARMTHASIPRERRLELGITDGLIRISVGIEDAEDLLEDIGQALENI 379          
BLAST of CX294765 vs. ExPASy Swiss-Prot
Match: METC_BACSU (Cystathionine beta-lyase metC OS=Bacillus subtilis GN=metC PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.833e-17
Identity = 50/112 (44.64%), Postives = 65/112 (58.04%), Query Frame = 2
Query:    5 VKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQALHAI 340
            VKRV+YPGL  HP       Q TG G V+SFE++    A  K ++ + +P  A S G  ESI+  PA MS+  + + ER K GI D L+R S GVE  +DL+ D  QAL  I
Sbjct:  274 VKRVYYPGLADHPGAETHKSQSTGAGAVLSFELESK-EAVKKLVENVSLPVFAVSLGAVESILSYPATMSHAAMPKEEREKRGITDGLLRLSVGVEHADDLEHDFEQALKEI 384          
BLAST of CX294765 vs. ExPASy Swiss-Prot
Match: CYS3_YEAST (Cystathionine gamma-lyase OS=Saccharomyces cerevisiae GN=CYS3 PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 5.333e-17
Identity = 43/111 (38.74%), Postives = 68/111 (61.26%), Query Frame = 2
Query:    5 VKRVHYPGLKSHPEHHIATQQMTGF--GGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDNLVRFSFGVEDFEDLKADVLQAL 331
            V  V+YPGLK+HP + +  +Q      GG++SF + G   A  KF  + ++  +A S GG ES+++ PA+M++  + +  R   G+ D+LVR S G+ED +DL  D+ QAL
Sbjct:  279 VVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQAL 389          
The following BLAST results are available for this feature:
BLAST of CX294765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
CGL_RAT6.730e-2043.75Cystathionine gamma-lyase OS=Rattus norvegicus GN=... [more]
METC_LACLC1.958e-1944.04Cystathionine beta-lyase OS=Lactococcus lactis sub... [more]
METB_HELPJ2.557e-1943.36Cystathionine gamma-synthase OS=Helicobacter pylor... [more]
CGL_MACFA2.557e-1944.14Cystathionine gamma-lyase OS=Macaca fascicularis G... [more]
CGL_MOUSE3.340e-1942.86Cystathionine gamma-lyase OS=Mus musculus GN=Cth P... [more]
METB_HELPY5.697e-1942.48Cystathionine gamma-synthase OS=Helicobacter pylor... [more]
CGL_HUMAN7.441e-1944.14Cystathionine gamma-lyase OS=Homo sapiens GN=CTH P... [more]
MCCB_BACSU2.828e-1841.96Cystathionine gamma-lyase OS=Bacillus subtilis GN=... [more]
METC_BACSU1.833e-1744.64Cystathionine beta-lyase metC OS=Bacillus subtilis... [more]
CYS3_YEAST5.333e-1738.74Cystathionine gamma-lyase OS=Saccharomyces cerevis... [more]

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Properties
Property NameValue
Genbank descriptionC05055F10SK FlavSen1 Citrus clementina cDNA clone C05055F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294765 ID=CX294765; Name=CX294765; organism=Citrus clementina; type=EST; length=393bp
AAAGGTGAAGCGCGTTCACTATCCAGGCTTGAAGAGTCATCCTGAGCATC
ACATTGCCACACAGCAAATGACTGGTTTTGGTGGGGTAGTTAGTTTTGAG
GTGGATGGAGACCTAACGGCCACCATAAAATTTATTGATGCCTTGAAAAT
CCCATATATTGCTCCATCCTTCGGTGGCTGTGAGAGCATTGTTGATCAGC
CAGCTATAATGTCGTATTGGGACCTTAGCCAATCGGAGAGGCTCAAGTAT
GGGATTATGGATAACTTGGTTCGCTTTAGCTTTGGAGTGGAAGATTTTGA
AGATTTGAAGGCAGATGTACTTCAGGCCCTGCATGCCATATAGAAGTGTT
TTTTGTGTTTCACCTTCGCATAATTTTCATTTTACTTTTCCTA
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