CX294769

Overview
NameCX294769
Unique NameCX294769
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length629
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP4C_XENTR (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Xenopus tropicalis GN=ppp4c PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.112e-69
Identity = 120/180 (66.67%), Postives = 148/180 (82.22%), Query Frame = 2 
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 628
            DLD+ I +++  + + E E++ LC   +EIL+EESNVQ V+SPVTVCGDIHGQF+DL +LF+ GG VPETNY+FMGDFVDRG+ S+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RKYG+   WRYCT++FDYL+LSAIIDG + CVHGGLSP I+T+DQIR I+R  E
Sbjct:    6 DLDRQIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQE 185
[Close]
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP4C_XENLA (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Xenopus laevis GN=ppp4c PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.112e-69
Identity = 120/180 (66.67%), Postives = 148/180 (82.22%), Query Frame = 2 
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 628
            DLD+ I +++  + + E E++ LC   +EIL+EESNVQ V+SPVTVCGDIHGQF+DL +LF+ GG VPETNY+FMGDFVDRG+ S+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RKYG+   WRYCT++FDYL+LSAIIDG + CVHGGLSP I+T+DQIR I+R  E
Sbjct:    6 DLDRQIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQE 185
[Close]
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP4C_RAT (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Rattus norvegicus GN=Ppp4c PE=1 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.112e-69
Identity = 120/180 (66.67%), Postives = 148/180 (82.22%), Query Frame = 2 
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 628
            DLD+ I +++  + + E E++ LC   +EIL+EESNVQ V+SPVTVCGDIHGQF+DL +LF+ GG VPETNY+FMGDFVDRG+ S+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RKYG+   WRYCT++FDYL+LSAIIDG + CVHGGLSP I+T+DQIR I+R  E
Sbjct:    6 DLDRQIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQE 185
[Close]
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP4C_PONAB (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Pongo abelii GN=PPP4C PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.112e-69
Identity = 120/180 (66.67%), Postives = 148/180 (82.22%), Query Frame = 2 
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 628
            DLD+ I +++  + + E E++ LC   +EIL+EESNVQ V+SPVTVCGDIHGQF+DL +LF+ GG VPETNY+FMGDFVDRG+ S+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RKYG+   WRYCT++FDYL+LSAIIDG + CVHGGLSP I+T+DQIR I+R  E
Sbjct:    6 DLDRQIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQE 185
[Close]
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP4C_MOUSE (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Mus musculus GN=Ppp4c PE=1 SV=2)

HSP 1 Score: 262.692 bits (670), Expect = 1.112e-69
Identity = 120/180 (66.67%), Postives = 148/180 (82.22%), Query Frame = 2 
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 628
            DLD+ I +++  + + E E++ LC   +EIL+EESNVQ V+SPVTVCGDIHGQF+DL +LF+ GG VPETNY+FMGDFVDRG+ S+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RKYG+   WRYCT++FDYL+LSAIIDG + CVHGGLSP I+T+DQIR I+R  E
Sbjct:    6 DLDRQIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQE 185
[Close]
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP4C_HUMAN (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Homo sapiens GN=PPP4C PE=1 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.112e-69
Identity = 120/180 (66.67%), Postives = 148/180 (82.22%), Query Frame = 2 
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 628
            DLD+ I +++  + + E E++ LC   +EIL+EESNVQ V+SPVTVCGDIHGQF+DL +LF+ GG VPETNY+FMGDFVDRG+ S+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RKYG+   WRYCT++FDYL+LSAIIDG + CVHGGLSP I+T+DQIR I+R  E
Sbjct:    6 DLDRQIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQE 185
[Close]
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP4C_BOVIN (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Bos taurus GN=PPP4C PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.112e-69
Identity = 120/180 (66.67%), Postives = 148/180 (82.22%), Query Frame = 2 
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 628
            DLD+ I +++  + + E E++ LC   +EIL+EESNVQ V+SPVTVCGDIHGQF+DL +LF+ GG VPETNY+FMGDFVDRG+ S+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RKYG+   WRYCT++FDYL+LSAIIDG + CVHGGLSP I+T+DQIR I+R  E
Sbjct:    6 DLDRQIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQE 185
[Close]
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP4CB_DANRE (Serine/threonine-protein phosphatase 4 catalytic subunit B OS=Danio rerio GN=ppp4cb PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.112e-69
Identity = 120/180 (66.67%), Postives = 149/180 (82.78%), Query Frame = 2 
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 628
            DLD+ I +++  + + E+E++ LC   +EIL+EESNVQ V+SPVTVCGDIHGQF+DL +LF+ GG VPETNY+FMGDFVDRG+ S+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RKYG+   WRYCT++FDYL+LSAIIDG + CVHGGLSP I+T+DQIR I+R  E
Sbjct:    6 DLDRQIDQLRRCELIKENEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQE 185
[Close]
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP11_YEAST (Serine/threonine-protein phosphatase PP1-1 OS=Saccharomyces cerevisiae GN=SIT4 PE=1 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 1.897e-69
Identity = 117/176 (66.48%), Postives = 148/176 (84.09%), Query Frame = 2 
Query:   95 DQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPET-NYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            D+W+  +K+ Q L E+E++ LCE VKE+L+EESN+QPV +PVTVCGDIHGQFHDL++LF+T G  P+  NYIF+GD+VDRGY SLE FT+L+ LK +YPA ITL+RGNHESRQ+TQVYGFY+EC  KYG+   W+YC  VFD+LTL+AIIDG +LCVHGGLSP+IR +DQIRV+ R
Sbjct:    7 DEWLETIKKCQALTENEMKQLCEMVKELLMEESNIQPVQTPVTVCGDIHGQFHDLLELFRTAGGFPDDINYIFLGDYVDRGYYSLETFTLLMCLKVKYPAKITLVRGNHESRQITQVYGFYEECLNKYGSTTVWKYCCQVFDFLTLAAIIDGKILCVHGGLSPEIRMLDQIRVLSR 182
[Close]
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP4C_RABIT (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Oryctolagus cuniculus GN=PPP4C PE=1 SV=2)

HSP 1 Score: 261.151 bits (666), Expect = 3.235e-69
Identity = 120/180 (66.67%), Postives = 147/180 (81.67%), Query Frame = 2 
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 628
            DLD+ I ++   + + E E++ LC   +EIL+EESNVQ V+SPVTVCGDIHGQF+DL +LF+ GG VPETNY+FMGDFVDRG+ S+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RKYG+   WRYCT++FDYL+LSAIIDG + CVHGGLSP I+T+DQIR I+R  E
Sbjct:    6 DLDRQIEQLLRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQE 185
The following BLAST results are available for this feature:
BLAST of CX294769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PP4C_XENTR1.112e-6966.67Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_XENLA1.112e-6966.67Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_RAT1.112e-6966.67Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_PONAB1.112e-6966.67Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_MOUSE1.112e-6966.67Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_HUMAN1.112e-6966.67Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_BOVIN1.112e-6966.67Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4CB_DANRE1.112e-6966.67Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP11_YEAST1.897e-6966.48Serine/threonine-protein phosphatase PP1-1 OS=Sacc... [more]
PP4C_RABIT3.235e-6966.67Serine/threonine-protein phosphatase 4 catalytic s... [more]

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Properties
Property NameValue
Genbank descriptionC05055G02SK FlavSen1 Citrus clementina cDNA clone C05055G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294769 ID=CX294769; Name=CX294769; organism=Citrus clementina; type=EST; length=629bp
GTATATTGAAAAATTTCCTGGGCTTTTCTCTCTCTGTGAACACGAAAACC
CTAATTTCTTGGCCTTCATTTTCGTGGAAAATTGAATGGATTTGGATCAG
TGGATAGCCAAAGTCAAAGAGGGCCAGCATCTTTTAGAAGACGAGCTTCA
GCTCCTCTGCGAATACGTGAAAGAAATCCTTATTGAAGAGTCCAATGTGC
AGCCTGTTAACAGTCCGGTCACTGTCTGTGGTGATATTCATGGCCAGTTT
CATGACCTAATGAAACTTTTTCAAACAGGAGGTCATGTACCAGAGACAAA
TTACATATTTATGGGTGATTTCGTTGATCGGGGTTACAATAGTCTTGAAG
TTTTCACCATTCTTTTGCTTCTTAAGGCAAGATACCCGGCAAATATTACT
CTTTTACGTGGAAATCATGAAAGCAGACAACTGACCCAGGTATATGGATT
TTATGATGAGTGCCAGAGGAAGTATGGAAATGCTAATGCATGGCGGTACT
GTACAGATGTTTTTGACTATCTAACTCTCTCAGCAATTATAGATGGCACT
GTGCTTTGCGTTCATGGTGGCCTTTCTCCTGACATACGGACAATTGATCA
GATTAGGGTGATTGAACGGAATTGTGAAT
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