CX294769

Overview
NameCX294769
Unique NameCX294769
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length629
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP11_TOBAC (Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Nicotiana tabacum GN=NPP1 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 8.024e-44
Identity = 78/163 (47.85%), Postives = 114/163 (69.94%), Query Frame = 2
Query:  131 LLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            L E E++ LC   +EI +++ N+  +  P+ +CGDIHGQ+ DL++LF+ GG  PE NY+F+GD+VDRG  SLE   +LL  K +YP N  LLRGNHE   + ++YGFYDEC+R++ N   W+  T+ F+ L ++A+ID  +LC+HGGLSP +  +DQIR + R
Sbjct:   41 LSEAEIRSLCSASREIFLQQPNLLDLKPPIKICGDIHGQYGDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVKLWKCFTECFNCLPVAALIDEKILCMHGGLSPVLTNLDQIRNLPR 202          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP17_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 7 OS=Arabidopsis thaliana GN=TOPP7 PE=2 SV=3)

HSP 1 Score: 176.022 bits (445), Expect = 1.369e-43
Identity = 80/173 (46.24%), Postives = 121/173 (69.94%), Query Frame = 2
Query:  107 AKVKEGQ--HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            A+ K G+   L E E++ LC   ++I + + N+  + +PV +CGDIHGQ+ DL++LF+ GG+ P +NY+F+GD+VDRG  SLE   +LL  K ++P N  LLRGNHES  + ++YGFYDEC+R++ +   WR  TD F+ L ++A+ID  + C+HGGLSP++ ++ QIR I R
Sbjct:   16 AREKPGKIVQLSETEIKQLCFVSRDIFLRQPNLLELEAPVKICGDIHGQYPDLLRLFEHGGYPPNSNYLFLGDYVDRGKQSLETICLLLAYKIKFPENFFLLRGNHESASINRIYGFYDECKRRF-SVKIWRIFTDCFNCLPVAALIDERIFCMHGGLSPELLSLRQIRDIRR 187          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP15_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 5 OS=Arabidopsis thaliana GN=TOPP5 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.788e-43
Identity = 82/177 (46.33%), Postives = 120/177 (67.80%), Query Frame = 2
Query:   92 LDQWIAKVKEGQHLLED-ELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            LD    K    Q +L D E++ LC   +EI +++  +  + +PV +CGDIHGQ+ DL++LF+ GG  P  NY+F+GD+VDRG  SLE   +LL  K +YP N  LLRGNHE   + ++YGFYDEC+R++ N   W+  TD F+ L ++A+ID  +LC+HGGLSP++  ++QI+ IER
Sbjct:   22 LDYRNPKAGTKQAMLNDSEIRQLCFVSREIFLQQPCLLELAAPVKICGDIHGQYSDLLRLFEYGGFPPAANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVKLWKVFTDTFNCLPVAAVIDEKILCMHGGLSPELINVEQIKNIER 197          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP13_TOBAC (Serine/threonine-protein phosphatase PP1 isozyme 3 OS=Nicotiana tabacum GN=NPP3 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.049e-43
Identity = 78/163 (47.85%), Postives = 114/163 (69.94%), Query Frame = 2
Query:  131 LLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            L E E++ LC   ++I +++ N+    +P+   GDIHGQ+ DL++LF+ GG  PE NY+F+GD+VDRG  SLE   +LL  K +YP N  LLRGNHE   + ++YGFYDEC+R++ N   W+  TD F+ L ++A+ID  +LC+HGGLSPD+ ++DQIR + R
Sbjct:   27 LSESEIKQLCVASRDIFLKQPNLLESEAPIKTRGDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGRQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVKLWKSFTDCFNCLPVAALIDEKILCMHGGLSPDLSSLDQIRNLPR 188          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP13_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 3 OS=Arabidopsis thaliana GN=TOPP3 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.982e-43
Identity = 76/170 (44.71%), Postives = 116/170 (68.24%), Query Frame = 2
Query:  110 KVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            K  +   L E E++ LC   K+I + + N+  + +P+ +CGD HGQF DL++LF+ GG+ P  NY+F+GD+VDRG  S+E   +LL  K +Y  N  LLRGNHE   + ++YGFYDEC+++Y +   W+  TD F+ L ++A+ID  +LC+HGGLSP+++ +D+IR I R
Sbjct:   20 KTTKQVQLTEAEIKHLCSTAKQIFLTQPNLLELEAPIKICGDTHGQFSDLLRLFEYGGYPPAANYLFLGDYVDRGKQSVETICLLLAYKIKYKENFFLLRGNHECASINRIYGFYDECKKRY-SVRVWKIFTDCFNCLPVAALIDEKILCMHGGLSPELKHLDEIRNIPR 188          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: GLC7A_CAEEL (Serine/threonine-protein phosphatase PP1-alpha OS=Caenorhabditis elegans GN=gsp-1 PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 8.872e-43
Identity = 75/161 (46.58%), Postives = 113/161 (70.19%), Query Frame = 2
Query:  137 EDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            E E++ LC   +EI + +  +  + +P+ +CGDIHGQ++DL++LF+ GG  PE NY+F+GD+VDRG  SLE   +LL  K +YP N  LLRGNHE   + ++YGFYDEC+R++ +   W+  TD F+ L ++A+ID  + C HGGLSPD++ ++QIR + R
Sbjct:   32 EAEIRALCHKSREIFLSQPILLELEAPLKICGDIHGQYNDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKVKYPENFFLLRGNHECASINRIYGFYDECKRRF-SIKLWKTFTDCFNCLPIAALIDEKIFCCHGGLSPDLQNMEQIRRVMR 191          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: GLC7A_CAEBR (Serine/threonine-protein phosphatase PP1-alpha OS=Caenorhabditis briggsae GN=gsp-1 PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 8.872e-43
Identity = 75/161 (46.58%), Postives = 113/161 (70.19%), Query Frame = 2
Query:  137 EDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            E E++ LC   +EI + +  +  + +P+ +CGDIHGQ++DL++LF+ GG  PE NY+F+GD+VDRG  SLE   +LL  K +YP N  LLRGNHE   + ++YGFYDEC+R++ +   W+  TD F+ L ++A+ID  + C HGGLSPD++ ++QIR + R
Sbjct:   32 EAEIRALCHKSREIFLSQPILLELEAPLKICGDIHGQYNDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKVKYPENFFLLRGNHECASINRIYGFYDECKRRF-SIKLWKTFTDCFNCLPIAALIDEKIFCCHGGLSPDLQNMEQIRRVMR 191          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP1B_XENTR (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Xenopus tropicalis GN=ppp1cb PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.513e-42
Identity = 77/163 (47.24%), Postives = 114/163 (69.94%), Query Frame = 2
Query:  131 LLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            + E E++ LC   +EI + +  +  + +P+ +CGDIHGQ+ DL++LF+ GG  PE NY+F+GD+VDRG  SLE   +LL  K +YP N  LLRGNHE   + ++YGFYDEC+R++ N   W+  TD F+ L ++AI+D  + C HGGLSPD+++++QIR I R
Sbjct:   29 MTEAEVRGLCIKSREIFLSQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMR 190          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP1B_XENLA (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Xenopus laevis GN=ppp1cb PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.513e-42
Identity = 77/163 (47.24%), Postives = 114/163 (69.94%), Query Frame = 2
Query:  131 LLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            + E E++ LC   +EI + +  +  + +P+ +CGDIHGQ+ DL++LF+ GG  PE NY+F+GD+VDRG  SLE   +LL  K +YP N  LLRGNHE   + ++YGFYDEC+R++ N   W+  TD F+ L ++AI+D  + C HGGLSPD+++++QIR I R
Sbjct:   29 MTEAEVRGLCIKSREIFLSQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMR 190          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP1B_RAT (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus GN=Ppp1cb PE=1 SV=3)

HSP 1 Score: 172.555 bits (436), Expect = 1.513e-42
Identity = 77/163 (47.24%), Postives = 114/163 (69.94%), Query Frame = 2
Query:  131 LLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            + E E++ LC   +EI + +  +  + +P+ +CGDIHGQ+ DL++LF+ GG  PE NY+F+GD+VDRG  SLE   +LL  K +YP N  LLRGNHE   + ++YGFYDEC+R++ N   W+  TD F+ L ++AI+D  + C HGGLSPD+++++QIR I R
Sbjct:   29 MTEAEVRGLCIKSREIFLSQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMR 190          
The following BLAST results are available for this feature:
BLAST of CX294769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PP11_TOBAC8.024e-4447.85Serine/threonine-protein phosphatase PP1 isozyme 1... [more]
PP17_ARATH1.369e-4346.24Serine/threonine-protein phosphatase PP1 isozyme 7... [more]
PP15_ARATH1.788e-4346.33Serine/threonine-protein phosphatase PP1 isozyme 5... [more]
PP13_TOBAC3.049e-4347.85Serine/threonine-protein phosphatase PP1 isozyme 3... [more]
PP13_ARATH3.982e-4344.71Serine/threonine-protein phosphatase PP1 isozyme 3... [more]
GLC7A_CAEEL8.872e-4346.58Serine/threonine-protein phosphatase PP1-alpha OS=... [more]
GLC7A_CAEBR8.872e-4346.58Serine/threonine-protein phosphatase PP1-alpha OS=... [more]
PP1B_XENTR1.513e-4247.24Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_XENLA1.513e-4247.24Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_RAT1.513e-4247.24Serine/threonine-protein phosphatase PP1-beta cata... [more]

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Properties
Property NameValue
Genbank descriptionC05055G02SK FlavSen1 Citrus clementina cDNA clone C05055G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294769 ID=CX294769; Name=CX294769; organism=Citrus clementina; type=EST; length=629bp
GTATATTGAAAAATTTCCTGGGCTTTTCTCTCTCTGTGAACACGAAAACC
CTAATTTCTTGGCCTTCATTTTCGTGGAAAATTGAATGGATTTGGATCAG
TGGATAGCCAAAGTCAAAGAGGGCCAGCATCTTTTAGAAGACGAGCTTCA
GCTCCTCTGCGAATACGTGAAAGAAATCCTTATTGAAGAGTCCAATGTGC
AGCCTGTTAACAGTCCGGTCACTGTCTGTGGTGATATTCATGGCCAGTTT
CATGACCTAATGAAACTTTTTCAAACAGGAGGTCATGTACCAGAGACAAA
TTACATATTTATGGGTGATTTCGTTGATCGGGGTTACAATAGTCTTGAAG
TTTTCACCATTCTTTTGCTTCTTAAGGCAAGATACCCGGCAAATATTACT
CTTTTACGTGGAAATCATGAAAGCAGACAACTGACCCAGGTATATGGATT
TTATGATGAGTGCCAGAGGAAGTATGGAAATGCTAATGCATGGCGGTACT
GTACAGATGTTTTTGACTATCTAACTCTCTCAGCAATTATAGATGGCACT
GTGCTTTGCGTTCATGGTGGCCTTTCTCCTGACATACGGACAATTGATCA
GATTAGGGTGATTGAACGGAATTGTGAAT
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