CX294769

Overview
NameCX294769
Unique NameCX294769
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length629
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP12_SCHPO (Serine/threonine-protein phosphatase PP1-2 OS=Schizosaccharomyces pombe GN=sds21 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.581e-42
Identity = 78/185 (42.16%), Postives = 123/185 (66.49%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQH--------LLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            D+D  I K+ + ++        L + E++ LC   + I + +  +  + +P+ +CGDIHGQ+ DL++LF+ GG+ P+ NY+F+GD+VDRG  SLEV  +L   K +YP N  LLRGNHE   + ++YGFYDEC+R+Y +   W+  TD F+ + ++A+ID  + C+HGGLSPD+ ++DQI+ I R
Sbjct:    4 DIDAIIEKLVKARNGKPSKQVQLSDAEIRYLCTTSRSIFLSQPMLLELEAPLKICGDIHGQYSDLLRLFEYGGYPPDANYLFLGDYVDRGKQSLEVICLLFAYKIKYPENFFLLRGNHEFASINRIYGFYDECKRRY-SIKLWKTFTDCFNCMPVAAVIDEKIFCMHGGLSPDLNSLDQIQRIIR 187          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP12_DROME (Serine/threonine-protein phosphatase alpha-2 isoform OS=Drosophila melanogaster GN=Pp1-87B PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.371e-42
Identity = 78/171 (45.61%), Postives = 117/171 (68.42%), Query Frame = 2
Query:  107 AKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            A+  +   L E E++ LC   +EI + +  +  + +P+ +CGDIHGQ++DL++LF+ GG  PE+NY+F+GD+VDRG  SLE   +LL  K +Y  N  LLRGNHE   + ++YGFYDEC+R+Y +   W+  TD F+ L ++AI+D  + C HGGLSPD+ +++QIR I R
Sbjct:   20 ARPGKNVQLSEGEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYSENFFLLRGNHECASINRIYGFYDECKRRY-SIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLTSMEQIRRIMR 189          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP1B_DROME (Serine/threonine-protein phosphatase beta isoform OS=Drosophila melanogaster GN=flw PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.403e-42
Identity = 77/163 (47.24%), Postives = 113/163 (69.33%), Query Frame = 2
Query:  131 LLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            + E E++ LC   +EI +++  +  + +P+ +CGDIHGQ+ DL++LF+ GG  P  NY+F+GD+VDRG  SLE   +LL  K +YP N  LLRGNHE   + ++YGFYDEC+R+Y N   W+  TD F+ L ++AIID  + C HGGLSPD++ ++QIR + R
Sbjct:   29 MTEAEVRGLCLKSREIFLQQPILLELEAPLIICGDIHGQYTDLLRLFEYGGFPPAANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NVKLWKTFTDCFNCLPVAAIIDEKIFCCHGGLSPDLQGMEQIRRLMR 190          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2B_SCHPO (Serine/threonine-protein phosphatase 2B catalytic subunit OS=Schizosaccharomyces pombe GN=ppb1 PE=2 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 2.416e-40
Identity = 83/172 (48.26%), Postives = 113/172 (65.70%), Query Frame = 2
Query:  113 VKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 628
            ++EG+ L E++   + +   EIL  E N+  V++PVTVCGDIHGQ++DLMKLF+ GG+   T Y+F+GD+VDRGY S+E    L  LK  YP  + LLRGNHE   LT  + F  EC  KY N   +  C   F+ L L+AI++   LCVHGGLSP++ T++ IR+I R CE
Sbjct:   80 IREGR-LSEEQTLYIIKKATEILKSEDNLIEVDAPVTVCGDIHGQYYDLMKLFEVGGNPANTQYLFLGDYVDRGYFSIECLLYLWALKIWYPKTLWLLRGNHECAHLTDYFTFKLECTHKY-NIKVYEACLQSFNALPLAAIMNKQFLCVHGGLSPELHTLNDIRMINRFCE 249          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PPQ1_YEAST (Serine/threonine-protein phosphatase PPQ OS=Saccharomyces cerevisiae GN=PPQ1 PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.155e-40
Identity = 72/159 (45.28%), Postives = 110/159 (69.18%), Query Frame = 2
Query:  143 ELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            E+QL+C + +EI + +  +  + +P+ V GD+HGQF+DL+++ +  G   +TNY+F+GD+VDRG NSLE   +LL  K +Y  N  +LRGNHES  +T++YGFYDEC+R+  ++  W+   DVF+ L L+AII   + CVHGG+SPD+  + QI  + R
Sbjct:  271 EIQLICYHAREIFLNQPTLLRLQAPIKVVGDVHGQFNDLLRILKLSGVPSDTNYLFLGDYVDRGKNSLETILLLLCYKIKYKDNFFMLRGNHESANVTKMYGFYDECKRRL-SSKVWKMFVDVFNTLPLAAIIQDKIFCVHGGISPDLHDMKQIEKVAR 428          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2BA_RAT (Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus GN=Ppp3ca PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 9.181e-40
Identity = 83/169 (49.11%), Postives = 112/169 (66.27%), Query Frame = 2
Query:  113 VKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            +KEG+      L+++ E    IL +E N+  +++PVTVCGDIHGQF DLMKLF+ GG    T Y+F+GD+VDRGY S+E    L  LK  YP  + LLRGNHE R LT+ + F  EC+ KY +   +  C D FD L L+A+++   LCVHGGLSP+I T+D IR ++R
Sbjct:   51 MKEGRLEESVALRIITEGAS-ILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDR 217          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2BA_MOUSE (Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Mus musculus GN=Ppp3ca PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 9.181e-40
Identity = 83/169 (49.11%), Postives = 112/169 (66.27%), Query Frame = 2
Query:  113 VKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            +KEG+      L+++ E    IL +E N+  +++PVTVCGDIHGQF DLMKLF+ GG    T Y+F+GD+VDRGY S+E    L  LK  YP  + LLRGNHE R LT+ + F  EC+ KY +   +  C D FD L L+A+++   LCVHGGLSP+I T+D IR ++R
Sbjct:   51 MKEGRLEESVALRIITEGAS-ILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDR 217          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2BA_HUMAN (Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Homo sapiens GN=PPP3CA PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 9.181e-40
Identity = 83/169 (49.11%), Postives = 112/169 (66.27%), Query Frame = 2
Query:  113 VKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            +KEG+      L+++ E    IL +E N+  +++PVTVCGDIHGQF DLMKLF+ GG    T Y+F+GD+VDRGY S+E    L  LK  YP  + LLRGNHE R LT+ + F  EC+ KY +   +  C D FD L L+A+++   LCVHGGLSP+I T+D IR ++R
Sbjct:   51 MKEGRLEESVALRIITEGAS-ILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDR 217          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2BA_BOVIN (Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Bos taurus GN=PPP3CA PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.199e-39
Identity = 83/169 (49.11%), Postives = 112/169 (66.27%), Query Frame = 2
Query:  113 VKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            +KEG+      L+++ E    IL +E N+  +++PVTVCGDIHGQF DLMKLF+ GG    T Y+F+GD+VDRGY S+E    L  LK  YP  + LLRGNHE R LT+ + F  EC+ KY +   +  C D FD L L+A+++   LCVHGGLSP+I T+D IR ++R
Sbjct:   51 MKEGRLEETVALRIITEGAS-ILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDR 217          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2BB_RAT (Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Rattus norvegicus GN=Ppp3cb PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.671e-39
Identity = 83/169 (49.11%), Postives = 112/169 (66.27%), Query Frame = 2
Query:  113 VKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            VKEG+   E  L+++ E    IL  E  +  V +P+TVCGDIHGQF DLMKLF+ GG    T Y+F+GD+VDRGY S+E    L +LK  YP+ + LLRGNHE R LT+ + F  EC+ KY +   +  C + FD L L+A+++   LCVHGGLSP+I T+D IR ++R
Sbjct:   60 VKEGRVDEEIALRIINEGAA-ILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYEACMEAFDSLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDR 226          
The following BLAST results are available for this feature:
BLAST of CX294769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PP12_SCHPO2.581e-4242.16Serine/threonine-protein phosphatase PP1-2 OS=Schi... [more]
PP12_DROME3.371e-4245.61Serine/threonine-protein phosphatase alpha-2 isofo... [more]
PP1B_DROME4.403e-4247.24Serine/threonine-protein phosphatase beta isoform ... [more]
PP2B_SCHPO2.416e-4048.26Serine/threonine-protein phosphatase 2B catalytic ... [more]
PPQ1_YEAST3.155e-4045.28Serine/threonine-protein phosphatase PPQ OS=Saccha... [more]
PP2BA_RAT9.181e-4049.11Serine/threonine-protein phosphatase 2B catalytic ... [more]
PP2BA_MOUSE9.181e-4049.11Serine/threonine-protein phosphatase 2B catalytic ... [more]
PP2BA_HUMAN9.181e-4049.11Serine/threonine-protein phosphatase 2B catalytic ... [more]
PP2BA_BOVIN1.199e-3949.11Serine/threonine-protein phosphatase 2B catalytic ... [more]
PP2BB_RAT2.671e-3949.11Serine/threonine-protein phosphatase 2B catalytic ... [more]

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Properties
Property NameValue
Genbank descriptionC05055G02SK FlavSen1 Citrus clementina cDNA clone C05055G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294769 ID=CX294769; Name=CX294769; organism=Citrus clementina; type=EST; length=629bp
GTATATTGAAAAATTTCCTGGGCTTTTCTCTCTCTGTGAACACGAAAACC
CTAATTTCTTGGCCTTCATTTTCGTGGAAAATTGAATGGATTTGGATCAG
TGGATAGCCAAAGTCAAAGAGGGCCAGCATCTTTTAGAAGACGAGCTTCA
GCTCCTCTGCGAATACGTGAAAGAAATCCTTATTGAAGAGTCCAATGTGC
AGCCTGTTAACAGTCCGGTCACTGTCTGTGGTGATATTCATGGCCAGTTT
CATGACCTAATGAAACTTTTTCAAACAGGAGGTCATGTACCAGAGACAAA
TTACATATTTATGGGTGATTTCGTTGATCGGGGTTACAATAGTCTTGAAG
TTTTCACCATTCTTTTGCTTCTTAAGGCAAGATACCCGGCAAATATTACT
CTTTTACGTGGAAATCATGAAAGCAGACAACTGACCCAGGTATATGGATT
TTATGATGAGTGCCAGAGGAAGTATGGAAATGCTAATGCATGGCGGTACT
GTACAGATGTTTTTGACTATCTAACTCTCTCAGCAATTATAGATGGCACT
GTGCTTTGCGTTCATGGTGGCCTTTCTCCTGACATACGGACAATTGATCA
GATTAGGGTGATTGAACGGAATTGTGAAT
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