CX294769

Overview
NameCX294769
Unique NameCX294769
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length629
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: RDGC_DROME (Serine/threonine-protein phosphatase rdgC OS=Drosophila melanogaster GN=rdgC PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.332e-22
Identity = 66/188 (35.11%), Postives = 101/188 (53.72%), Query Frame = 2
Query:   77 EN*MDLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPV----TVCGDIHGQFHDLMKLFQTGGHVPETN-YIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKY--GNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            +N +DL   + + K G  L    + L+     + L +  N+ PV++ V    TVCGD+HG+  DL+ +    G    +N Y+F GDFVDRG   LEV  +LL L   +P  + L RGNHE   +   YGF  E + KY   +     +  +V+ +L L ++++  VL VHGG S D  ++D I+ I+R
Sbjct:  102 KNHIDLLIDVFRKKRGNRLHPKYVALILREAAKSLKQLPNISPVSTAVSQQVTVCGDLHGKLDDLLVVLHKNGLPSSSNPYVFNGDFVDRGKRGLEVLLLLLSLYLAFPNAVFLNRGNHEDSVMNARYGFIREVESKYPRNHKRILAFIDEVYRWLPLGSVLNSRVLIVHGGFS-DSTSLDLIKSIDR 288          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PPP7_ARATH (Serine/threonine-protein phosphatase 7 OS=Arabidopsis thaliana GN=PP7 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.272e-22
Identity = 59/124 (47.58%), Postives = 73/124 (58.87%), Query Frame = 2
Query:  212 SPVTVCGDIHGQFHDLMKLFQ-TGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGN--ANAWRYCTDVFDYLTLSAIIDGTVLCVHGGL 574
            S V V GDIHGQ HDL+ L + TG       Y+F GD+VDRG   LE F +LL  K   P  + LLRGNHES+  T +YGF  E   KYG+   + +R C   F+ L L++II G V   HGGL
Sbjct:   77 SNVVVVGDIHGQLHDLLFLLKDTGFPCQNRCYVFNGDYVDRGAWGLETFLVLLSWKVLMPDRVYLLRGNHESKYCTSMYGFEKEVLTKYGDKGKHVYRKCLGCFEGLPLASIISGRVYTAHGGL 200          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP1L_ENCCU (Probable serine/threonine-protein phosphatase ECU05_0440 OS=Encephalitozoon cuniculi GN=ECU05_0440 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.127e-21
Identity = 62/174 (35.63%), Postives = 94/174 (54.02%), Query Frame = 2
Query:  110 KVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSP--VTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKY--GNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            ++  G+ +  D L+ + E  + IL+   NV    S   V + GD HGQ+ D++ +        +   IF GD+VDRG +S+E F +LL LK  +P  + L RGNHE   + +VYGFYDE +RKY   + + +R   D F  L +S I++  V   HGGL      +D ++ I R
Sbjct:  155 EISGGRSIPADTLESILEQGESILLGCENVVHTESSGEVLIFGDTHGQYFDVVSILNKVFD-KDRMVIFNGDYVDRGSHSVENFALLLSLKILFPGRVHLTRGNHELSDINRVYGFYDEVKRKYPFSSDSVYRRFQDAFRALPISIIVNEKVFITHGGLPEAPVKVDNLQEIYR 327          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PPE1_RAT (Serine/threonine-protein phosphatase with EF-hands 1 OS=Rattus norvegicus GN=Ppef1 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.512e-21
Identity = 61/168 (36.31%), Postives = 89/168 (52.98%), Query Frame = 2
Query:  152 LLCEYVKEILIEESNV--QPVN---------SPVTVCGDIHGQFHDLMKLFQTGGHVPETN-YIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKY--GNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGL--SPDIRTIDQIR 607
            L   YV E+L E   +  Q  N           +T+CGD+HG+  DLM +F   G   E N Y+F GDFVDRG NS+E+  ILL+    YP ++ L RGNHE   +   YGF  E  +KY        +   +++ +L +  IID  +L +HGG+  S D+  + Q++
Sbjct:  135 LHAHYVLEVLFEARKILKQMPNFTRIQTFPAKEITICGDLHGKLDDLMLIFYKNGLPSEKNPYVFNGDFVDRGNNSMEILMILLVSFLVYPTDLHLNRGNHEDFMMNLRYGFTKEILQKYKLHGKKILQVLEELYTWLPIGTIIDNEILVIHGGISESTDLNILQQLQ 302          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PPE2_MOUSE (Serine/threonine-protein phosphatase with EF-hands 2 OS=Mus musculus GN=Ppef2 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.308e-21
Identity = 63/157 (40.13%), Postives = 81/157 (51.59%), Query Frame = 2
Query:  149 QLLCEYVKEILIEES-------NVQPVNS----PVTVCGDIHGQFHDLMKLFQTGG-HVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKY--GNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLS 577
            QL   YV  +L E         N+  V++     VTVCGD+HGQ  DL+ +F   G   PE  Y+F GDFVDRG +S+EV  +L      YP    L RGNHE   +   YGF  E   KY        R   DVF +L L+ ++D  VL +HGG+S
Sbjct:  140 QLHARYVLNLLYETRKHLAQLPNINRVSTCYSEEVTVCGDLHGQLDDLIFIFYKNGLPSPERAYVFNGDFVDRGKDSVEVLMVLFAFMLVYPKEFHLNRGNHEDHLVNLRYGFTKEVMHKYKIHGKKILRTLQDVFCWLPLATLVDEKVLVLHGGVS 296          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PPE1_HUMAN (Serine/threonine-protein phosphatase with EF-hands 1 OS=Homo sapiens GN=PPEF1 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.126e-20
Identity = 61/185 (32.97%), Postives = 95/185 (51.35%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSP----VTVCGDIHGQFHDLMKLFQTGGHVPETN-YIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKY--GNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERN 622
            D+D  +   KE Q L    +  +    K++L +  N   + +     VT+CGD+HG+  DL  +F   G   E N Y+F GDFVDRG NS+E+  IL +    YP ++ L RGNHE   +   YGF  E   KY        +   + + +L +  I+D  +L +HGG+S +   ++ +  +ERN
Sbjct:  120 DIDLLLEAFKEQQILHAHYVLEVLFETKKVLKQMPNFTHIQTSPSKEVTICGDLHGKLDDLFLIFYKNGLPSERNPYVFNGDFVDRGKNSIEILMILCVSFLVYPNDLHLNRGNHEDFMMNLRYGFTKEILHKYKLHGKRILQILEEFYAWLPIGTIVDNEILVIHGGIS-ETTDLNLLHRVERN 303          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PPP7I_ARATH (Serine/threonine-protein phosphatase 7 inactive homolog OS=Arabidopsis thaliana GN=At5g10900 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.080e-20
Identity = 59/167 (35.33%), Postives = 87/167 (52.10%), Query Frame = 2
Query:  101 WIAKVKEGQHLLEDELQL-LCEYVKEILIEESNVQPVN-----SPVTVCGDIHGQFHDLMKLFQTGGHVPETN-YIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRY--CTDVFDYLTLSAIIDGTVLCVHGGL 574
            W   V E   +L   + + L +   +IL +E+N   +N     S V V GD+HGQ HDL+K+F   G   +   ++F G+++ RG  SLEVF +LL  K   P N+ LLRG+ E+R   +   F  +   +YG      Y  C D F  L L+++I  +V   HGGL
Sbjct:  180 WKNSVSEFSLILPHSVAVSLVDCASQILEKEANCVKINGCSEDSRVIVVGDLHGQLHDLLKIFDQSGRPSQNQCFVFNGNYIGRGSWSLEVFLVLLAWKIMMPENVILLRGSSETRVSAEELDFLKDICDRYGEHGPMLYSKCIDCFKMLPLASVISNSVYTTHGGL 346          
The following BLAST results are available for this feature:
BLAST of CX294769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
RDGC_DROME1.332e-2235.11Serine/threonine-protein phosphatase rdgC OS=Droso... [more]
PPP7_ARATH2.272e-2247.58Serine/threonine-protein phosphatase 7 OS=Arabidop... [more]
PP1L_ENCCU1.127e-2135.63Probable serine/threonine-protein phosphatase ECU0... [more]
PPE1_RAT2.512e-2136.31Serine/threonine-protein phosphatase with EF-hands... [more]
PPE2_MOUSE7.308e-2140.13Serine/threonine-protein phosphatase with EF-hands... [more]
PPE1_HUMAN2.126e-2032.97Serine/threonine-protein phosphatase with EF-hands... [more]
PPP7I_ARATH8.080e-2035.33Serine/threonine-protein phosphatase 7 inactive ho... [more]

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Properties
Property NameValue
Genbank descriptionC05055G02SK FlavSen1 Citrus clementina cDNA clone C05055G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294769 ID=CX294769; Name=CX294769; organism=Citrus clementina; type=EST; length=629bp
GTATATTGAAAAATTTCCTGGGCTTTTCTCTCTCTGTGAACACGAAAACC
CTAATTTCTTGGCCTTCATTTTCGTGGAAAATTGAATGGATTTGGATCAG
TGGATAGCCAAAGTCAAAGAGGGCCAGCATCTTTTAGAAGACGAGCTTCA
GCTCCTCTGCGAATACGTGAAAGAAATCCTTATTGAAGAGTCCAATGTGC
AGCCTGTTAACAGTCCGGTCACTGTCTGTGGTGATATTCATGGCCAGTTT
CATGACCTAATGAAACTTTTTCAAACAGGAGGTCATGTACCAGAGACAAA
TTACATATTTATGGGTGATTTCGTTGATCGGGGTTACAATAGTCTTGAAG
TTTTCACCATTCTTTTGCTTCTTAAGGCAAGATACCCGGCAAATATTACT
CTTTTACGTGGAAATCATGAAAGCAGACAACTGACCCAGGTATATGGATT
TTATGATGAGTGCCAGAGGAAGTATGGAAATGCTAATGCATGGCGGTACT
GTACAGATGTTTTTGACTATCTAACTCTCTCAGCAATTATAGATGGCACT
GTGCTTTGCGTTCATGGTGGCCTTTCTCCTGACATACGGACAATTGATCA
GATTAGGGTGATTGAACGGAATTGTGAAT
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