CX294769

Overview
NameCX294769
Unique NameCX294769
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length629
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PPX1_PARTE (Serine/threonine-protein phosphatase PP-X homolog 1 OS=Paramecium tetraurelia GN=Ppx1 PE=3 SV=2)

HSP 1 Score: 260.766 bits (665), Expect = 4.225e-69
Identity = 115/180 (63.89%), Postives = 145/180 (80.56%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 628
            D+DQWI  +K G++L E ++++LC   K+IL  E NV  V +PVT+CGDIHGQF+DLM+LF+ GG VPETNY+F+GDFVDRGYNS+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RKY   N W+YCT+VFDYL L+A+++  + CVHGGLSP I+TID+IR+I R  E
Sbjct:    3 DIDQWIETLKNGENLKETDVKILCNKAKDILNNEDNVIRVEAPVTICGDIHGQFYDLMELFKVGGDVPETNYLFLGDFVDRGYNSVETFLLLLALKVRYPDQITLIRGNHESRQITQVYGFYDECLRKYSTLNVWKYCTEVFDYLALAAVVNDNIFCVHGGLSPYIKTIDEIRIINRKQE 182          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2AB_BOVIN (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Bos taurus GN=PPP2CB PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 4.225e-69
Identity = 115/177 (64.97%), Postives = 145/177 (81.92%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            DLDQW+ ++ E + L E++++ LCE  KEIL +ESNVQ V  PVTVCGD+HGQFHDLM+LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+Y TD+FDYL L+A++DG + C+HGGLSP I T+D IR ++R
Sbjct:    9 DLDQWVEQLNECKQLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDR 185          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PPX2_PARTE (Serine/threonine-protein phosphatase PP-X homolog 2 OS=Paramecium tetraurelia GN=Ppx2 PE=3 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 5.518e-69
Identity = 115/180 (63.89%), Postives = 145/180 (80.56%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 628
            D+DQWI  +K G++L E ++++LC   K+IL  E NV  V +PVT+CGDIHGQF DLM+LF+ GG VPETNY+F+GDFVDRGYNS+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RKY   N W+YCT+VFDYL L+A+++ ++ CVHGGLSP I+TID+IR+I R  E
Sbjct:    3 DIDQWIETLKNGENLKETDVKILCNKAKDILNNEDNVIRVEAPVTICGDIHGQFQDLMELFKVGGDVPETNYLFLGDFVDRGYNSVETFLLLLALKVRYPDQITLIRGNHESRQITQVYGFYDECLRKYSTLNVWKYCTEVFDYLALAAVVNDSIFCVHGGLSPYIKTIDEIRIINRKQE 182          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PPX4_PARTE (Serine/threonine-protein phosphatase PP-X homolog 4 OS=Paramecium tetraurelia GN=Ppx4 PE=3 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 7.207e-69
Identity = 115/180 (63.89%), Postives = 149/180 (82.78%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 628
            DLD+ IA+++  +++ E E++ LC   +EIL+EESNVQ V++PVT+CGDIHGQF DLM+LF+ GG  P+TNY+F+GDFVDRG+NS+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RKYG+ N WRYCTD+FDYL+L+A+I+  + CVHGGLSP I+T+D IR I+R  E
Sbjct:    5 DLDRQIAQLRNCENITEGEVKALCTKAREILVEESNVQRVDAPVTICGDIHGQFFDLMELFKVGGDCPDTNYLFLGDFVDRGFNSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSLNVWRYCTDIFDYLSLAAVIEEKIFCVHGGLSPSIKTMDDIRAIDRKQE 184          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PPX3_PARTE (Serine/threonine-protein phosphatase PP-X homolog 3 OS=Paramecium tetraurelia GN=Ppx3 PE=3 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 7.207e-69
Identity = 115/180 (63.89%), Postives = 149/180 (82.78%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 628
            DLD+ IA+++  +++ E E++ LC   +EIL+EESNVQ V++PVT+CGDIHGQF DLM+LF+ GG  P+TNY+F+GDFVDRG+NS+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RKYG+ N WRYCTD+FDYL+L+A+I+  + CVHGGLSP I+T+D IR I+R  E
Sbjct:    5 DLDRQIAQLRNCENITEGEVKALCTKAREILVEESNVQRVDAPVTICGDIHGQFFDLMELFKVGGDCPDTNYLFLGDFVDRGFNSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSLNVWRYCTDIFDYLSLAAVIEEKIFCVHGGLSPSIKTMDDIRAIDRKQE 184          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2AB_RAT (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus GN=Ppp2cb PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.229e-68
Identity = 114/177 (64.41%), Postives = 145/177 (81.92%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            +LDQW+ ++ E + L E++++ LCE  KEIL +ESNVQ V  PVTVCGD+HGQFHDLM+LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+Y TD+FDYL L+A++DG + C+HGGLSP I T+D IR ++R
Sbjct:    9 ELDQWVEQLNECKQLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDR 185          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2AB_RABIT (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Oryctolagus cuniculus GN=PPP2CB PE=1 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.229e-68
Identity = 114/177 (64.41%), Postives = 145/177 (81.92%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            +LDQW+ ++ E + L E++++ LCE  KEIL +ESNVQ V  PVTVCGD+HGQFHDLM+LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+Y TD+FDYL L+A++DG + C+HGGLSP I T+D IR ++R
Sbjct:    9 ELDQWVEQLNECKQLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDR 185          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2AB_MOUSE (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Mus musculus GN=Ppp2cb PE=1 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.229e-68
Identity = 114/177 (64.41%), Postives = 145/177 (81.92%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            +LDQW+ ++ E + L E++++ LCE  KEIL +ESNVQ V  PVTVCGD+HGQFHDLM+LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+Y TD+FDYL L+A++DG + C+HGGLSP I T+D IR ++R
Sbjct:    9 ELDQWVEQLNECKQLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDR 185          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2AB_HUMAN (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Homo sapiens GN=PPP2CB PE=1 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.229e-68
Identity = 114/177 (64.41%), Postives = 145/177 (81.92%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            +LDQW+ ++ E + L E++++ LCE  KEIL +ESNVQ V  PVTVCGD+HGQFHDLM+LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+Y TD+FDYL L+A++DG + C+HGGLSP I T+D IR ++R
Sbjct:    9 ELDQWVEQLNECKQLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDR 185          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2AA_CHICK (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Gallus gallus GN=PPP2CA PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.229e-68
Identity = 115/177 (64.97%), Postives = 144/177 (81.36%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            +LDQWI ++ E + L E +++ LCE  KEIL +ESNVQ V  PVTVCGD+HGQFHDLM+LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+Y TD+FDYL L+A++DG + C+HGGLSP I T+D IR ++R
Sbjct:    9 ELDQWIEQLNECRQLSESQVRSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDR 185          
The following BLAST results are available for this feature:
BLAST of CX294769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PPX1_PARTE4.225e-6963.89Serine/threonine-protein phosphatase PP-X homolog ... [more]
PP2AB_BOVIN4.225e-6964.97Serine/threonine-protein phosphatase 2A catalytic ... [more]
PPX2_PARTE5.518e-6963.89Serine/threonine-protein phosphatase PP-X homolog ... [more]
PPX4_PARTE7.207e-6963.89Serine/threonine-protein phosphatase PP-X homolog ... [more]
PPX3_PARTE7.207e-6963.89Serine/threonine-protein phosphatase PP-X homolog ... [more]
PP2AB_RAT1.229e-6864.41Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_RABIT1.229e-6864.41Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_MOUSE1.229e-6864.41Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_HUMAN1.229e-6864.41Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_CHICK1.229e-6864.97Serine/threonine-protein phosphatase 2A catalytic ... [more]

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Properties
Property NameValue
Genbank descriptionC05055G02SK FlavSen1 Citrus clementina cDNA clone C05055G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294769 ID=CX294769; Name=CX294769; organism=Citrus clementina; type=EST; length=629bp
GTATATTGAAAAATTTCCTGGGCTTTTCTCTCTCTGTGAACACGAAAACC
CTAATTTCTTGGCCTTCATTTTCGTGGAAAATTGAATGGATTTGGATCAG
TGGATAGCCAAAGTCAAAGAGGGCCAGCATCTTTTAGAAGACGAGCTTCA
GCTCCTCTGCGAATACGTGAAAGAAATCCTTATTGAAGAGTCCAATGTGC
AGCCTGTTAACAGTCCGGTCACTGTCTGTGGTGATATTCATGGCCAGTTT
CATGACCTAATGAAACTTTTTCAAACAGGAGGTCATGTACCAGAGACAAA
TTACATATTTATGGGTGATTTCGTTGATCGGGGTTACAATAGTCTTGAAG
TTTTCACCATTCTTTTGCTTCTTAAGGCAAGATACCCGGCAAATATTACT
CTTTTACGTGGAAATCATGAAAGCAGACAACTGACCCAGGTATATGGATT
TTATGATGAGTGCCAGAGGAAGTATGGAAATGCTAATGCATGGCGGTACT
GTACAGATGTTTTTGACTATCTAACTCTCTCAGCAATTATAGATGGCACT
GTGCTTTGCGTTCATGGTGGCCTTTCTCCTGACATACGGACAATTGATCA
GATTAGGGTGATTGAACGGAATTGTGAAT
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