CX294769

Overview
NameCX294769
Unique NameCX294769
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length629
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PPX1_ARATH (Serine/threonine-protein phosphatase PP-X isozyme 1 OS=Arabidopsis thaliana GN=PPX1 PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 2.739e-68
Identity = 116/180 (64.44%), Postives = 147/180 (81.67%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 628
            DLD+ I ++K  + L E E++ LC    EIL+EESNVQ V++PVT+CGDIHGQF+D+M+LF+ GG  P+TNY+FMGDFVDRGY S+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RKYG++N WRYCTD+FDY++LSA+++  + CVHGGLSP I T+DQIR I+R  E
Sbjct:    3 DLDRQIGQLKRCEPLSESEVKALCLKAMEILVEESNVQRVDAPVTLCGDIHGQFYDMMELFKVGGDCPKTNYLFMGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSSNVWRYCTDIFDYMSLSAVVENKIFCVHGGLSPAIMTLDQIRTIDRKQE 182          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP4C_DROME (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Drosophila melanogaster GN=Pp4-19C PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 3.577e-68
Identity = 119/180 (66.11%), Postives = 146/180 (81.11%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 628
            DLD+ I ++K  + + E+E++ LC   +EIL+EE NVQ V+SPVTVCGDIHGQF+DL +LF+ GG VPE NY+FMGDFVDRGY S+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RKYG+   WRYCT++FDYL+LSAIIDG + CVHGGLSP I+ +DQIR I+R  E
Sbjct:    6 DLDRQIEQLKRCEIIKENEVKALCAKAREILVEEGNVQRVDSPVTVCGDIHGQFYDLKELFKVGGDVPEKNYLFMGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSTAVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQYLDQIRSIDRKQE 185          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP4C1_CAEBR (Serine/threonine-protein phosphatase 4 catalytic subunit 1 OS=Caenorhabditis briggsae GN=pph-4.1 PE=3 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.041e-67
Identity = 116/180 (64.44%), Postives = 146/180 (81.11%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 628
            DLD+ I K+   + + E +++ LC   +EIL EE NVQ ++SPVT+CGDIHGQF+DLM+LF+ GG VP TNY+F+GDFVDRG+ S+E F +LL LKARYP  + L+RGNHESRQ+TQVYGFYDEC RKYGNA+ W++CT+VFDYL L+A+IDG V CVHGGLSP I T+DQIRVI+R  E
Sbjct:   31 DLDRHIEKLMRCELIAEQDVKTLCAKAREILAEEGNVQVIDSPVTICGDIHGQFYDLMELFRVGGPVPNTNYLFLGDFVDRGFYSVETFLLLLALKARYPDRMMLIRGNHESRQITQVYGFYDECMRKYGNASVWKHCTEVFDYLALAAVIDGKVFCVHGGLSPSISTMDQIRVIDRKQE 210          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP4C1_CAEEL (Serine/threonine-protein phosphatase 4 catalytic subunit 1 OS=Caenorhabditis elegans GN=pph-4.1 PE=1 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.359e-67
Identity = 116/180 (64.44%), Postives = 147/180 (81.67%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 628
            DLD+ I K+   + + E +++ LC   +EIL EE NVQ ++SPVT+CGDIHGQF+DLM+LF+ GG VP TNY+F+GDFVDRG+ S+E F +LL LKARYP  + L+RGNHESRQ+TQVYGFYDEC RKYGNA+ W++CT+VFDYL+L+A+IDG V CVHGGLSP I T+DQIRVI+R  E
Sbjct:   31 DLDRHIEKLMRCELIAEQDVKTLCAKAREILAEEGNVQVIDSPVTICGDIHGQFYDLMELFKVGGPVPNTNYLFLGDFVDRGFYSVETFLLLLALKARYPDRMMLIRGNHESRQITQVYGFYDECLRKYGNASVWKHCTEVFDYLSLAAVIDGKVFCVHGGLSPSISTMDQIRVIDRKQE 210          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2AA_RAT (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus GN=Ppp2ca PE=2 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.359e-67
Identity = 114/177 (64.41%), Postives = 143/177 (80.79%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            +LDQWI ++ E + L E +++ LCE  KEIL +ESNVQ V  PVTVCGD+HGQFHDLM+LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RY   IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+Y TD+FDYL L+A++DG + C+HGGLSP I T+D IR ++R
Sbjct:    9 ELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDR 185          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2AA_RABIT (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Oryctolagus cuniculus GN=PPP2CA PE=2 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.359e-67
Identity = 114/177 (64.41%), Postives = 143/177 (80.79%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            +LDQWI ++ E + L E +++ LCE  KEIL +ESNVQ V  PVTVCGD+HGQFHDLM+LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RY   IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+Y TD+FDYL L+A++DG + C+HGGLSP I T+D IR ++R
Sbjct:    9 ELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDR 185          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2AA_PIG (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Sus scrofa GN=PPP2CA PE=2 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.359e-67
Identity = 114/177 (64.41%), Postives = 143/177 (80.79%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            +LDQWI ++ E + L E +++ LCE  KEIL +ESNVQ V  PVTVCGD+HGQFHDLM+LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RY   IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+Y TD+FDYL L+A++DG + C+HGGLSP I T+D IR ++R
Sbjct:    9 ELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDR 185          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2AA_MOUSE (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Mus musculus GN=Ppp2ca PE=1 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.359e-67
Identity = 114/177 (64.41%), Postives = 143/177 (80.79%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            +LDQWI ++ E + L E +++ LCE  KEIL +ESNVQ V  PVTVCGD+HGQFHDLM+LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RY   IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+Y TD+FDYL L+A++DG + C+HGGLSP I T+D IR ++R
Sbjct:    9 ELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDR 185          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2AA_HUMAN (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Homo sapiens GN=PPP2CA PE=1 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.359e-67
Identity = 114/177 (64.41%), Postives = 143/177 (80.79%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            +LDQWI ++ E + L E +++ LCE  KEIL +ESNVQ V  PVTVCGD+HGQFHDLM+LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RY   IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+Y TD+FDYL L+A++DG + C+HGGLSP I T+D IR ++R
Sbjct:    9 ELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDR 185          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2AA_BOVIN (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Bos taurus GN=PPP2CA PE=1 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.359e-67
Identity = 114/177 (64.41%), Postives = 143/177 (80.79%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            +LDQWI ++ E + L E +++ LCE  KEIL +ESNVQ V  PVTVCGD+HGQFHDLM+LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RY   IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+Y TD+FDYL L+A++DG + C+HGGLSP I T+D IR ++R
Sbjct:    9 ELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDR 185          
The following BLAST results are available for this feature:
BLAST of CX294769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PPX1_ARATH2.739e-6864.44Serine/threonine-protein phosphatase PP-X isozyme ... [more]
PP4C_DROME3.577e-6866.11Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C1_CAEBR1.041e-6764.44Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C1_CAEEL1.359e-6764.44Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP2AA_RAT1.359e-6764.41Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_RABIT1.359e-6764.41Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_PIG1.359e-6764.41Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_MOUSE1.359e-6764.41Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_HUMAN1.359e-6764.41Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_BOVIN1.359e-6764.41Serine/threonine-protein phosphatase 2A catalytic ... [more]

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Properties
Property NameValue
Genbank descriptionC05055G02SK FlavSen1 Citrus clementina cDNA clone C05055G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294769 ID=CX294769; Name=CX294769; organism=Citrus clementina; type=EST; length=629bp
GTATATTGAAAAATTTCCTGGGCTTTTCTCTCTCTGTGAACACGAAAACC
CTAATTTCTTGGCCTTCATTTTCGTGGAAAATTGAATGGATTTGGATCAG
TGGATAGCCAAAGTCAAAGAGGGCCAGCATCTTTTAGAAGACGAGCTTCA
GCTCCTCTGCGAATACGTGAAAGAAATCCTTATTGAAGAGTCCAATGTGC
AGCCTGTTAACAGTCCGGTCACTGTCTGTGGTGATATTCATGGCCAGTTT
CATGACCTAATGAAACTTTTTCAAACAGGAGGTCATGTACCAGAGACAAA
TTACATATTTATGGGTGATTTCGTTGATCGGGGTTACAATAGTCTTGAAG
TTTTCACCATTCTTTTGCTTCTTAAGGCAAGATACCCGGCAAATATTACT
CTTTTACGTGGAAATCATGAAAGCAGACAACTGACCCAGGTATATGGATT
TTATGATGAGTGCCAGAGGAAGTATGGAAATGCTAATGCATGGCGGTACT
GTACAGATGTTTTTGACTATCTAACTCTCTCAGCAATTATAGATGGCACT
GTGCTTTGCGTTCATGGTGGCCTTTCTCCTGACATACGGACAATTGATCA
GATTAGGGTGATTGAACGGAATTGTGAAT
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