CX294769

Overview
NameCX294769
Unique NameCX294769
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length629
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2A_TOBAC (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 2.834e-65
Identity = 112/177 (63.28%), Postives = 142/177 (80.23%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            +LD+ IA++ + + L E E++ LCE  KEIL+EESNVQPV SPVT+CGDIHGQFHDL +LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+  TD+FDY  L+A+++  + C+HGGLSP I T+D IR  +R
Sbjct:   12 NLDEQIAQLMQCKPLSEQEVRGLCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKTFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDR 188          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2A4_ARATH (Serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Arabidopsis thaliana GN=PP2A4 PE=2 SV=2)

HSP 1 Score: 247.669 bits (631), Expect = 3.701e-65
Identity = 110/178 (61.80%), Postives = 143/178 (80.34%), Query Frame = 2
Query:   86 MDLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            +DLD+ I+++ + + L E +++ LCE  KEIL++ESNVQPV SPVT+CGDIHGQFHDL +LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+  TD+FDY  L+A+++  + C+HGGLSP I T+D IR  +R
Sbjct:   12 IDLDEQISQLMQCKPLSEQQVRALCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGMCPDTNYLFMGDYVDRGYYSVETVTLLVALKMRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDR 189          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2A3_ARATH (Serine/threonine-protein phosphatase PP2A-3 catalytic subunit OS=Arabidopsis thaliana GN=PP2A3 PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 3.701e-65
Identity = 110/178 (61.80%), Postives = 143/178 (80.34%), Query Frame = 2
Query:   86 MDLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            +DLD+ I+++ + + L E +++ LCE  KEIL++ESNVQPV SPVT+CGDIHGQFHDL +LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+  TD+FDY  L+A+++  + C+HGGLSP I T+D IR  +R
Sbjct:   12 LDLDEQISQLMQCKPLSEQQVRALCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVGLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDR 189          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2AB_PIG (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform (Fragment) OS=Sus scrofa GN=PPP2CB PE=2 SV=2)

HSP 1 Score: 247.284 bits (630), Expect = 4.834e-65
Identity = 110/169 (65.09%), Postives = 138/169 (81.66%), Query Frame = 2
Query:  113 VKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            + E + L E++++ LCE  KEIL +ESNVQ V  PVTVCGD+HGQFHDLM+LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+Y TD+FDYL L+A++DG + C+HGGLSP I T+D IR ++R
Sbjct:    1 LNECKQLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDR 169          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2A2_ORYSJ (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A2 PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.407e-64
Identity = 111/176 (63.07%), Postives = 139/176 (78.98%), Query Frame = 2
Query:   92 LDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            LD  I ++ + + L E E++ LCE  KEIL+EESNVQPV SPVT+CGDIHGQFHDL +LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+  TD+FDY  L+A+++  + C+HGGLSP I T+D IR  +R
Sbjct:    8 LDDQIERLMQCKPLPEPEVRALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKTFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDR 183          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2A2_ORYSI (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A2 PE=2 SV=2)

HSP 1 Score: 245.743 bits (626), Expect = 1.407e-64
Identity = 111/176 (63.07%), Postives = 139/176 (78.98%), Query Frame = 2
Query:   92 LDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            LD  I ++ + + L E E++ LCE  KEIL+EESNVQPV SPVT+CGDIHGQFHDL +LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+  TD+FDY  L+A+++  + C+HGGLSP I T+D IR  +R
Sbjct:    8 LDDQIERLMQCKPLPEPEVRALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKTFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDR 183          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2A5_TOBAC (Serine/threonine-protein phosphatase PP2A-5 catalytic subunit OS=Nicotiana tabacum GN=NPP5 PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 1.837e-64
Identity = 108/177 (61.02%), Postives = 141/177 (79.66%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            +LD+ I+++ + + L E +++ LCE  KEIL EESNVQPV SPVT+CGDIHGQFHDL +LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RYP  +T+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+  TD+FDY  L+A+++  + C+HGGLSP I T+D +R  +R
Sbjct:   14 NLDEQISQLMQCKPLSEPDVRALCEKAKEILAEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGQCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRLTILRGNHESRQITQVYGFYDECLRKYGNANVWKTFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNVRSFDR 190          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2A2_SCHPO (Major serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Schizosaccharomyces pombe GN=ppa2 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 2.399e-64
Identity = 103/177 (58.19%), Postives = 147/177 (83.05%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            D+D+WI ++K+ + L E ++++LC+  +E+L +E+NVQPV +PVTVCGDIHGQFHDLM+LF+ GG VP+ NY+FMGD+VDRGY+S+E  ++L+ +K RYP  IT+LRGNHESRQ+TQVYGFYDEC RKYG+AN W++ T++FDY  L+A+I+  + C+HGGLSP I ++D +R ++R
Sbjct:   22 DVDRWIEQLKKCEPLSEADVEMLCDKAREVLCQENNVQPVRNPVTVCGDIHGQFHDLMELFKIGGDVPDMNYLFMGDYVDRGYHSVETVSLLVAMKLRYPNRITILRGNHESRQITQVYGFYDECLRKYGSANVWKHFTNLFDYFPLTALIEDRIFCLHGGLSPSIDSLDHVRTLDR 198          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2A1_ORYSJ (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A1 PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 3.133e-64
Identity = 111/177 (62.71%), Postives = 143/177 (80.79%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            DLD+ I++++E + L E E++ LCE  K IL+EE NVQPV  PVTVCGDIHGQF+DL++LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RY   IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+Y TD+FDYL L+A+++  V C+HGGLSP + T+D IR ++R
Sbjct:    6 DLDRQISQLRECKFLGEAEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIELFRIGGDSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVENQVFCLHGGLSPSLDTLDNIRALDR 182          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2A1_ORYSI (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A1 PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 3.133e-64
Identity = 111/177 (62.71%), Postives = 143/177 (80.79%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            DLD+ I++++E + L E E++ LCE  K IL+EE NVQPV  PVTVCGDIHGQF+DL++LF+ GG  P+TNY+FMGD+VDRGY S+E  T+L+ LK RY   IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+Y TD+FDYL L+A+++  V C+HGGLSP + T+D IR ++R
Sbjct:    6 DLDRQISQLRECKFLGEAEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIELFRIGGDSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVENQVFCLHGGLSPSLDTLDNIRALDR 182          
The following BLAST results are available for this feature:
BLAST of CX294769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PP2A_TOBAC2.834e-6563.28Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A4_ARATH3.701e-6561.80Serine/threonine-protein phosphatase PP2A-4 cataly... [more]
PP2A3_ARATH3.701e-6561.80Serine/threonine-protein phosphatase PP2A-3 cataly... [more]
PP2AB_PIG4.834e-6565.09Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2A2_ORYSJ1.407e-6463.07Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PP2A2_ORYSI1.407e-6463.07Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PP2A5_TOBAC1.837e-6461.02Serine/threonine-protein phosphatase PP2A-5 cataly... [more]
PP2A2_SCHPO2.399e-6458.19Major serine/threonine-protein phosphatase PP2A-2 ... [more]
PP2A1_ORYSJ3.133e-6462.71Serine/threonine-protein phosphatase PP2A-1 cataly... [more]
PP2A1_ORYSI3.133e-6462.71Serine/threonine-protein phosphatase PP2A-1 cataly... [more]

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Properties
Property NameValue
Genbank descriptionC05055G02SK FlavSen1 Citrus clementina cDNA clone C05055G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294769 ID=CX294769; Name=CX294769; organism=Citrus clementina; type=EST; length=629bp
GTATATTGAAAAATTTCCTGGGCTTTTCTCTCTCTGTGAACACGAAAACC
CTAATTTCTTGGCCTTCATTTTCGTGGAAAATTGAATGGATTTGGATCAG
TGGATAGCCAAAGTCAAAGAGGGCCAGCATCTTTTAGAAGACGAGCTTCA
GCTCCTCTGCGAATACGTGAAAGAAATCCTTATTGAAGAGTCCAATGTGC
AGCCTGTTAACAGTCCGGTCACTGTCTGTGGTGATATTCATGGCCAGTTT
CATGACCTAATGAAACTTTTTCAAACAGGAGGTCATGTACCAGAGACAAA
TTACATATTTATGGGTGATTTCGTTGATCGGGGTTACAATAGTCTTGAAG
TTTTCACCATTCTTTTGCTTCTTAAGGCAAGATACCCGGCAAATATTACT
CTTTTACGTGGAAATCATGAAAGCAGACAACTGACCCAGGTATATGGATT
TTATGATGAGTGCCAGAGGAAGTATGGAAATGCTAATGCATGGCGGTACT
GTACAGATGTTTTTGACTATCTAACTCTCTCAGCAATTATAGATGGCACT
GTGCTTTGCGTTCATGGTGGCCTTTCTCCTGACATACGGACAATTGATCA
GATTAGGGTGATTGAACGGAATTGTGAAT
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