CX294769

Overview
NameCX294769
Unique NameCX294769
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length629
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2A4_YEAST (Serine/threonine-protein phosphatase PP2A-like PPG1 OS=Saccharomyces cerevisiae GN=PPG1 PE=1 SV=2)

HSP 1 Score: 223.787 bits (569), Expect = 5.724e-58
Identity = 101/179 (56.42%), Postives = 140/179 (78.21%), Query Frame = 2
Query:   86 MDLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKY-GNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            M+LD+ + ++ + Q L E  ++ LC  +KE+L++ESNV  + +PVTV GD+HGQFHD++++FQ GG VP+TNY+F+GD+VDRG  S+E   +L++LK RYP+ I LLRGNHESRQ+TQ YGFY EC  KY GN+  W+Y TD+FDYL L  IID  + CVHGGLSP+++TIDQI++I+R
Sbjct:    1 MELDECLERLYKAQLLPEVTVRALCFKLKEMLVKESNVIHIQTPVTVVGDMHGQFHDMLEIFQIGGPVPDTNYLFLGDYVDRGLYSVETIMLLIVLKLRYPSRIHLLRGNHESRQITQSYGFYTECLNKYGGNSRVWQYLTDIFDYLVLCCIIDDEIFCVHGGLSPNVQTIDQIKIIDR 179          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2A3_PARTE (Serine/threonine-protein phosphatase PP2A catalytic subunit 3 OS=Paramecium tetraurelia GN=Ppn3 PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 7.476e-58
Identity = 99/177 (55.93%), Postives = 137/177 (77.40%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            ++D+ IAK+K+GQ L E E++ LC   KEIL +E N+  V +P+T+CGDIHGQFHDL++LFQ GG++P+TNY+F+GD+VDRG  S+E F+++L LK RY   I LLRGNHE+R++ +VYGFYDEC RKYGN   W+  T+VF YL LSAI++  + C HGGLSP + ++DQI+ + R
Sbjct:   14 NIDRQIAKLKQGQILTESEIKSLCIKAKEILSDEPNIIQVRAPLTICGDIHGQFHDLIELFQIGGNLPDTNYLFLGDYVDRGSQSVETFSLMLSLKVRYKDRIVLLRGNHENREINKVYGFYDECFRKYGNEIVWKQFTEVFGYLPLSAIVEQQIFCAHGGLSPAMESVDQIKQLNR 190          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2A1_PARTE (Serine/threonine-protein phosphatase PP2A catalytic subunit 1 OS=Paramecium tetraurelia GN=Ppn1 PE=3 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 2.175e-57
Identity = 98/177 (55.37%), Postives = 137/177 (77.40%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            ++D+ IAK+K+GQ L E E++ LC   KEIL +E N+  V +P+T+CGDIHGQFHDL++LFQ GG++P+TNY+F+GD+VDRG  S+E F+++L LK RY   I LLRGNHE+R++ ++YGFYDEC RKYGN   W+  T+VF YL LSAI++  + C HGGLSP + ++DQI+ + R
Sbjct:   14 NIDRQIAKLKQGQILSEQEVKSLCIKAKEILQDEPNIIQVRAPLTICGDIHGQFHDLIELFQIGGNLPDTNYLFLGDYVDRGSQSVETFSLMLSLKVRYKDRIVLLRGNHENREINKIYGFYDECFRKYGNEIVWKQFTEVFGYLPLSAIVEQQIFCAHGGLSPAMESVDQIKQLNR 190          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP2A2_PARTE (Serine/threonine-protein phosphatase PP2A catalytic subunit 2 OS=Paramecium tetraurelia GN=Ppn2 PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.710e-57
Identity = 97/177 (54.80%), Postives = 137/177 (77.40%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            ++D+ IAK+++GQ L E E++ LC   KEIL +E N+  V +P+T+CGDIHGQFHDL++LFQ GG++P+TNY+F+GD+VDRG  S+E F+++L LK RY   I LLRGNHE+R++ ++YGFYDEC RKYGN   W+  T+VF YL LSAI++  + C HGGLSP + ++DQI+ + R
Sbjct:   14 NIDRQIAKLRQGQILTEQEVKSLCIKAKEILQDEPNIIQVRAPLTICGDIHGQFHDLIELFQIGGNLPDTNYLFLGDYVDRGSQSVETFSLMLSLKVRYKDRIVLLRGNHENREINKIYGFYDECFRKYGNEIVWKQFTEVFGYLPLSAIVEQQIFCAHGGLSPAMESVDQIKQLNR 190          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PPH6_CAEEL (Putative serine/threonine-protein phosphatase pph-6 OS=Caenorhabditis elegans GN=pph-6 PE=2 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 3.141e-56
Identity = 101/175 (57.71%), Postives = 132/175 (75.43%), Query Frame = 2
Query:   95 DQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            +QWI    E ++L E +   LC  + + L  E+NV PV+SPVT+CGDIHGQF+DL++LF+TGG VP T Y+FMGD+VDRG+ SLE  T+L  L  +YP  ITLLRGNHESR+++ VYGFYDECQ KYG+ N  ++   VFD L + A+ID +VLCVHGGLSPDIRTID + +++R
Sbjct:   33 EQWITWASECKYLPESDAVALCATLIDRLSLEANVVPVSSPVTICGDIHGQFYDLLELFKTGGTVPNTKYVFMGDYVDRGHYSLETVTLLFCLLLKYPNQITLLRGNHESRRISNVYGFYDECQNKYGHGNVHKWFCKVFDVLPIGALIDESVLCVHGGLSPDIRTIDSLMLLDR 207          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP11_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Arabidopsis thaliana GN=TOPP1 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 7.013e-48
Identity = 82/164 (50.00%), Postives = 120/164 (73.17%), Query Frame = 2
Query:  128 HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            HL E E++ LC   KEI +++ N+  + +P+ +CGDIHGQ+ DL++LF+ GG  PE NY+F+GD+VDRG  SLE   +LL  K +YP N  LLRGNHES  + ++YGFYDEC+R++ N   W+  TD F+ L ++A+ID  +LC+HGG+SP+++++DQIR I R
Sbjct:   42 HLSEGEIRQLCAVSKEIFLQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHESASINRIYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALIDDRILCMHGGISPELKSLDQIRNIAR 204          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP11_ACECL (Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Acetabularia cliftonii PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.562e-47
Identity = 84/163 (51.53%), Postives = 119/163 (73.01%), Query Frame = 2
Query:  131 LLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            L E E++LLC   KEIL E+ N+  + +P+ +CGDIHGQ+ DL++LF+ GG  PE NY+F+GD+VDRG  SLE   +LL  K +YP N  +LRGNHE   + ++YGFYDEC+R+Y N   W+  TD F+ L ++AI+D  +LC+HGGLSP+++T++QIR I R
Sbjct:   27 LTESEIRLLCLTSKEILSEQPNLLELEAPIKICGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAFKIKYPENFFILRGNHECASINRIYGFYDECKRRY-NIRLWKTFTDCFNCLPVAAIVDEKILCMHGGLSPELKTLEQIRRIPR 188          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP18_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 8 OS=Arabidopsis thaliana GN=TOPP8 PE=2 SV=3)

HSP 1 Score: 187.193 bits (474), Expect = 5.937e-47
Identity = 85/184 (46.20%), Postives = 128/184 (69.57%), Query Frame = 2
Query:   92 LDQWIAKVKEGQ-----HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 628
            LD  I ++ EG+      L E E++ LC   ++I + + N+  +++P+ +CGDIHGQ+ DL++LF+ GG+ P  NY+F+GD+VDRG  SLE   +LL  K RYP+ I LLRGNHE  ++ ++YGFYDEC+R++ N   W+  TD F+ L ++A+ID  +LC+HGGLSPD+  ++QIR I+R  E
Sbjct:   14 LDDIIRRLLEGKGGKQVQLSESEIRQLCFNARQIFLSQPNLLDLHAPIRICGDIHGQYQDLLRLFEYGGYPPSANYLFLGDYVDRGKQSLETICLLLAYKIRYPSKIYLLRGNHEDAKINRIYGFYDECKRRF-NVRLWKVFTDCFNCLPVAALIDEKILCMHGGLSPDLDNLNQIREIQRPIE 196          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP1_MEDVA (Serine/threonine-protein phosphatase PP1 OS=Medicago varia GN=PP1 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.323e-46
Identity = 82/182 (45.05%), Postives = 124/182 (68.13%), Query Frame = 2
Query:   89 DLDQWIAKVKEGQ-----HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIER 619
            D+ + +   K G+     HL E +++ LC   KEI + + N+  + +P+ +CGD+HGQF DL++LF+ GG+ PE NY+F+GD+VDRG  S+E   +LL  K +Y  N  LLRGNHE   + ++YGFYDEC+R+Y N   W+  TD F+ L ++A++D  +LC+HGGLSP+++ +DQIR I R
Sbjct:    8 DIIKKLVSAKNGRTTKQVHLTEADIRQLCTSAKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKIKYKENFFLLRGNHECASINRIYGFYDECKRRY-NVRLWKTFTDCFNCLPVAALVDEKILCMHGGLSPELKNLDQIRNIAR 188          
BLAST of CX294769 vs. ExPASy Swiss-Prot
Match: PP1_PHAVU (Serine/threonine-protein phosphatase PP1 OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.256e-46
Identity = 85/184 (46.20%), Postives = 127/184 (69.02%), Query Frame = 2
Query:   92 LDQWIAKVKEGQ-----HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 628
            LD  I ++ EG+      L E E++ LC + ++I + +  +  + +P+ VCGDIHGQ+ DL++LF+ GG+ P  NY+F+GD+VDRG  SLE   +LL  K RYP  I LLRGNHE  ++ ++YGFYDEC+R++ N   W+  TD F+ L +SA+ID  +LC+HGGLSP++ ++DQI+ I+R  E
Sbjct:    6 LDDVIRRLLEGKGGKQVQLSESEIRQLCVHARQIFLSQPILLELRAPMRVCGDIHGQYQDLLRLFEYGGYPPAANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIFLLRGNHEEAKINRIYGFYDECKRRF-NVRLWKIFTDCFNCLPVSALIDDKILCMHGGLSPELESLDQIKEIQRPTE 188          
The following BLAST results are available for this feature:
BLAST of CX294769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PP2A4_YEAST5.724e-5856.42Serine/threonine-protein phosphatase PP2A-like PPG... [more]
PP2A3_PARTE7.476e-5855.93Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A1_PARTE2.175e-5755.37Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A2_PARTE3.710e-5754.80Serine/threonine-protein phosphatase PP2A catalyti... [more]
PPH6_CAEEL3.141e-5657.71Putative serine/threonine-protein phosphatase pph-... [more]
PP11_ARATH7.013e-4850.00Serine/threonine-protein phosphatase PP1 isozyme 1... [more]
PP11_ACECL1.562e-4751.53Serine/threonine-protein phosphatase PP1 isozyme 1... [more]
PP18_ARATH5.937e-4746.20Serine/threonine-protein phosphatase PP1 isozyme 8... [more]
PP1_MEDVA1.323e-4645.05Serine/threonine-protein phosphatase PP1 OS=Medica... [more]
PP1_PHAVU2.256e-4646.20Serine/threonine-protein phosphatase PP1 OS=Phaseo... [more]

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Properties
Property NameValue
Genbank descriptionC05055G02SK FlavSen1 Citrus clementina cDNA clone C05055G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294769 ID=CX294769; Name=CX294769; organism=Citrus clementina; type=EST; length=629bp
GTATATTGAAAAATTTCCTGGGCTTTTCTCTCTCTGTGAACACGAAAACC
CTAATTTCTTGGCCTTCATTTTCGTGGAAAATTGAATGGATTTGGATCAG
TGGATAGCCAAAGTCAAAGAGGGCCAGCATCTTTTAGAAGACGAGCTTCA
GCTCCTCTGCGAATACGTGAAAGAAATCCTTATTGAAGAGTCCAATGTGC
AGCCTGTTAACAGTCCGGTCACTGTCTGTGGTGATATTCATGGCCAGTTT
CATGACCTAATGAAACTTTTTCAAACAGGAGGTCATGTACCAGAGACAAA
TTACATATTTATGGGTGATTTCGTTGATCGGGGTTACAATAGTCTTGAAG
TTTTCACCATTCTTTTGCTTCTTAAGGCAAGATACCCGGCAAATATTACT
CTTTTACGTGGAAATCATGAAAGCAGACAACTGACCCAGGTATATGGATT
TTATGATGAGTGCCAGAGGAAGTATGGAAATGCTAATGCATGGCGGTACT
GTACAGATGTTTTTGACTATCTAACTCTCTCAGCAATTATAGATGGCACT
GTGCTTTGCGTTCATGGTGGCCTTTCTCCTGACATACGGACAATTGATCA
GATTAGGGTGATTGAACGGAATTGTGAAT
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